Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1140 ATGGTTTGCGAGATGGAGCATGACCTCATGGAGGACATGGACATCGAAGTCCTCCCTTCAATGTGGCCAGAAGATATTGGAACTGATGTTGGGAAACAGTTTAACATAGAGAAGCCCGGAAGTGACCAGGACATGTTGGAGGAGGTCACAATAGTGGAGGAGCCAACTATAGTGGATTTCAAGCGTCTCATGGAGCTCACCAACTATACAGACAAAGGGTCGTCCCAGTTGACCTATCTCATGAAATACTGGGAGTACAAGCAGGCTAATGCTGTGCGTCTCCTAAGAGAAGAACTCGACAACCTTATTAAACAGAGACAGGAGGTTGAGCTGAGGAAGTTAAAGATATTGGAAGAGCATCGATTTGAGGACATAAGATATGGGCATGATAAACGGCCAGTTTCTATATTGGATGAAGTTTATGACATATGGCAAGATATACCTCGCAGGAAAAACGATGTTGTTGTCCAGAACAAGGGTATTGAAATAAATGCTGAGTATGATACTGCAGTGTACTGGAAGCAGAGGGCAGTGCATCTAGAAAAACTGTTGGAGGCAAGTATACAGAGAGAGCAGACACTTATGGAGAAGCTGGAAGAAAGCATAAAGAATCTTGAAAGGCAGTCCTCGCCTGTAGAAGAACTGTCCCAGATTCTGAAAAGAGCAGATAATTTCTTGCATTTTATTCTGCAGAATGCACCTGTTGTCATAGGCCATCAGGACAAAGAGTTGCGCTATCGCTTCATCTATAATCATTTCCCAAGTTTACAAGAGGAGGACATCATAGGAAGAACAGATGTGGAAATTTTCACGGGATCTGGAGTGAGGGAATCTCAAGATTTTAAGAGAGAGGTCTTGGAAAAAGGATTGCCTGCAAAAAGGGAAATTACTTTTGAGACAGAACTATTCGGGTCAAAGACATTCTTAATTTATGTAGAACCTGTCTTTAGCAAGGCAGGAGAGACAATTGGGATAAATTACATGGGAATGGATGTGACAGATCAGGTGAGAAAAAGAGAAAGGATGGCACAGATTAGAGAAGAGATTGCCGTTCAGAAAGCCAAGGAGACTGAATTAAATAAGACCATTCACATTACAGAGGAGACTATGCGAGCAAAACAAATGCTAGCAACCATGTCTCATGAAATAAGATCTCCACTGTCTGGTGTTGTTAGCATGGCTGAAATTCTCTCTACTACAAAACTTGACAAGGAGCAAAGACAGCTCTTGGAAGTCATGCTTTCCTCAGGAGACTTGGTTCTACAACTTATAAATGACATATTGGATCTTTCCAAGGTTGAGTCAGGAGCAATGAAGTTGGAAGCTGCCAAATTCCGTCCAAGAGAGGTAGTAAGGCATGTGCTCCAGACTGCTGCAGCATCATTGCAGAAAATATTAACCCTAGAAGGTCATGTAGCAGATGATGTGCCTATTGAGGTCATTGGGGATGTTTTAAGGATTCGGCAAATTCTCACAAATCTTATAAGCAATGCAATCAAGTTTACCCATGAAGGTAAAGTTGGCATAAATCTCTACGTTGTAGCAGAACCGAGTTTTGGAAAATCGGAAGGTGGTCTCCAGAAGACGAGTGAAGACAATTCAAATGCATCCGTGAATGTATTGACAGAAGAGAAATACTTATCGTCGTCTCAACATGGGAGTGATGAATGTAGATCTCCTGTTAAAAGCGAATGCTCAAGGAATGGATATACAGAGGAGCAACCTCATTCAACTGAAACTACAGTGTGGATACGTTGCGATGTATACGACACTGGAATTGGAATACCAGAAAATGCAATTTCTACTTTATTTAAAAGGTACATGCAAGTCAGTGCAGACCACGCGCGAAAGTATGGTGGCACAGGGCTAGGATTAGCAATATGCAAACAACTGGTTGAATTAATGGGTGGTCGTCTAACTGTGTCGAGCAAAGAACACTGTGGTTCTACATTTACGTTCATACTCCCATACAAGGTTTCAATTGCTTGTGATCATTCAGATGACCCTGATGAGCTCTCAGATATGGACAACAACGACGCTGCGTCTGATTATACCACAGAAGGATTTTTCCAATTCCAACCACGTACACTGGGCTCGCTCTTTTCTTCCAACGGATCTACCAGAGCCCAAAAGTTGTTACCCCGCAAAATTGGTCTCAAAATACCCCATAACCTAAATGGGTTTTCAGACAATTCTTACTTGTTCCCCTCTAACAACATCATCTCAAACGGAACAACTTCAGTCGAAGATGCAATTCGAGTGACATTATCGGACACGCCAGAGATGTCTGAATCAGCTAGTTCATTGAGTCATAAGCCAGAAACAGAAACGGAAGGTGTAGTTAGCAGAGACGAACAGCGTCAAGATAACACATATGCTCAGCTCCAAGACGTTCCAGCAAGCAGAGAAATTGGTGTGCCAACAAAGTCAAGCAAAAGCCAGCAAACAAGTGAGACACGAGAGAAGGATGATAGAACTTCCCAATGTGTTACTAGTAGTAGCAGTAATAGTATATCAGCAGTATCAGAGCCTAAGATTCTTCTAGTTGAAGATAACAACGTCAACGTTATGGTGGCACGCTCGATGATGAAGCAGTTAGGTCACAGCATAGATGTGGTGAATAATGGAGTGGAAGCTGTGCGTGCAGTTCAACGCAGGGGTTATCATCTCATTCTGATGGATGTTTGCATGCCAGTTATGAATGGTCTTGAAGCAACAAAATTGATTCGCTCTTTTGAGGAAACTGGCAATTGGGATGCTGCAACAAAAGCTGGAATAGAGCCAAGCATTTCAACTTCAGATTTGCAGAAACCTGAATGCTCTTTACCTTCCACCAAGCGAATGCCAATTATAGCAATGACAGCAAATGCTTTGTCAGAGAGTGCGGAAGAGTGTTACGCCAACGGAATGGACTCATTTGTGTCGAAGCCGGTGACTTTCCAGAAATTGAAGGAGTGCCTTGAACAATTCCTACGGTGA 2979 0.4267 MVCEMEHDLMEDMDIEVLPSMWPEDIGTDVGKQFNIEKPGSDQDMLEEVTIVEEPTIVDFKRLMELTNYTDKGSSQLTYLMKYWEYKQANAVRLLREELDNLIKQRQEVELRKLKILEEHRFEDIRYGHDKRPVSILDEVYDIWQDIPRRKNDVVVQNKGIEINAEYDTAVYWKQRAVHLEKLLEASIQREQTLMEKLEESIKNLERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLQEEDIIGRTDVEIFTGSGVRESQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDVTDQVRKRERMAQIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDKEQRQLLEVMLSSGDLVLQLINDILDLSKVESGAMKLEAAKFRPREVVRHVLQTAAASLQKILTLEGHVADDVPIEVIGDVLRIRQILTNLISNAIKFTHEGKVGINLYVVAEPSFGKSEGGLQKTSEDNSNASVNVLTEEKYLSSSQHGSDECRSPVKSECSRNGYTEEQPHSTETTVWIRCDVYDTGIGIPENAISTLFKRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHCGSTFTFILPYKVSIACDHSDDPDELSDMDNNDAASDYTTEGFFQFQPRTLGSLFSSNGSTRAQKLLPRKIGLKIPHNLNGFSDNSYLFPSNNIISNGTTSVEDAIRVTLSDTPEMSESASSLSHKPETETEGVVSRDEQRQDNTYAQLQDVPASREIGVPTKSSKSQQTSETREKDDRTSQCVTSSSSNSISAVSEPKILLVEDNNVNVMVARSMMKQLGHSIDVVNNGVEAVRAVQRRGYHLILMDVCMPVMNGLEATKLIRSFEETGNWDAATKAGIEPSISTSDLQKPECSLPSTKRMPIIAMTANALSESAEECYANGMDSFVSKPVTFQKLKECLEQFLR 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1140 992 CDD HisKA 373 432 IPR003661 GO:0000155|GO:0007165
Prci2g1140 992 Coils Coil 92 119 - -
Prci2g1140 992 Coils Coil 181 215 - -
Prci2g1140 992 FunFam Histidine kinase 5 213 348 - -
Prci2g1140 992 FunFam Putative histidine kinase 5 359 436 - -
Prci2g1140 992 ProSiteProfiles Histidine kinase domain profile. 378 659 IPR005467 -
Prci2g1140 992 MobiDBLite consensus disorder prediction 759 836 - -
Prci2g1140 992 SMART REC_2 844 987 IPR001789 GO:0000160
Prci2g1140 992 PRINTS Bacterial sensor protein C-terminal signature 584 598 IPR004358 GO:0016310|GO:0016772
Prci2g1140 992 PRINTS Bacterial sensor protein C-terminal signature 619 637 IPR004358 GO:0016310|GO:0016772
Prci2g1140 992 PRINTS Bacterial sensor protein C-terminal signature 643 656 IPR004358 GO:0016310|GO:0016772
Prci2g1140 992 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 425 657 IPR036890 -
Prci2g1140 992 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 370 436 IPR036097 GO:0000155|GO:0007165
Prci2g1140 992 ProSiteProfiles Response regulatory domain profile. 845 991 IPR001789 GO:0000160
Prci2g1140 992 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 657 IPR003594 -
Prci2g1140 992 CDD REC_hyHK_CKI1_RcsC-like 846 987 - -
Prci2g1140 992 SMART HisKA_10 371 436 IPR003661 GO:0000155|GO:0007165
Prci2g1140 992 Pfam Response regulator receiver domain 846 914 IPR001789 GO:0000160
Prci2g1140 992 FunFam Histidine kinase 5 838 992 - -
Prci2g1140 992 Gene3D - 837 992 - -
Prci2g1140 992 MobiDBLite consensus disorder prediction 547 574 - -
Prci2g1140 992 CDD HATPase_EvgS-ArcB-TorS-like 487 656 - -
Prci2g1140 992 MobiDBLite consensus disorder prediction 759 775 - -
Prci2g1140 992 Pfam His Kinase A (phospho-acceptor) domain 373 436 IPR003661 GO:0000155|GO:0007165
Prci2g1140 992 Gene3D - 358 436 - -
Prci2g1140 992 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 12 991 - -
Prci2g1140 992 Gene3D PAS domain 213 348 - -
Prci2g1140 992 Gene3D - 437 662 IPR036890 -
Prci2g1140 992 SMART HKATPase_4 482 659 IPR003594 -
Prci2g1140 992 SUPERFAMILY CheY-like 843 992 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1140 Prci-Chr2 8397517 8403904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1140 1 991 Histidine Kinase Gene Family AT5G10720 60.181 0.0 1144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci2g1140 HATPase_c 5.6e-27 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1140 - - gmx:100819520 1471.06