Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1137 ATGGATCTCATAGAAACAGAGGAAGTGCAAGCCATAATAGGACCGTTGACATCGATGCAGGCCAACTTTGTGATCAGTCTAGGAAACAGAGCTCGTGTGCCCATTGTAACATTCTCAGCAACGAGTCCTTATCTTGCTTCACTTGGGAGTCCATATTTTTTTCGATTTGCACAAAATGATTCGGCTCAAGTGAATGCCATTAGAGCGATCGTGGAAGCTTTTGGGTGGAAAGAAGCAGTGCCCATTTACATCGACAACGATTATGGGAAGGGGGTCATACCCTTCTTAACTGATGCTCTGCAACAAGTGAATGTACGAATCCCATATCTCAGTGCCATTTTCCCTTCAGCCACTGATGAAGATATTACAGAAGAGCTCTACAAGCTAATGACCATGCAAACCAGAGTGTTCATTGTTCACATGTCTTCTGATCTTGGCTCCACTCTCTTCACCTTAGCACAGAAGATTGGAATGATGGCAGAGGGATATGTTTGGATCATCACTAACGGTTTGGCAAATGAGTTGAGCTCTTTGAATTCCTCTGTGATAGAATCAATGCAGGGTGTATTGGCAGTGAGGACCTATATTCCCAAAACGAAAGAGCTAGAGGATTTTAAGGTTCGATGGAAAATAAAGTTCCTGCAAGACAATCCAACTTTTGCTGGTTCAAATTTGAATGTTTTAGGGCTCTGGGCTTATGATGCTACCACCGCATTAGCTATGGCGGTTGAGAAAGTTGGCACCACAAACTTCGTCTTCCTGAAGACCAGAGCTTCAGTAAACTTGACTGGTCTTGAAAGGCTCGGAGTTTCGGTAAATGGAGAAAATCTTCGTGAAGCATTATCAAACACCATATTCAGAGGCCTAAGTGGAGAGTTCAAAGTTGGTGACGAGCAGTTGCAAACATCGACATTTGAGATTACTAATGTGATTGGTAACGGAGAAAGGAGGATAGGATTTTGGACATCACAGAGGGGACTAGTTAGAAGGCTGGATTCAACGAACACAAGCATAAATTCTTTATCCAAAAACAGTTTTGGACCAATCATATGGCCAGGGGATACTCACTCTATTCCAAAGGGTTGGGACAATCCTACAAATGCTCAAAAGATGAGGATTGGAGTTCCAGTGAGAACTGGTTACACTGAATTAGTGAAAATAACTCACGATCCTATCACTAATAGAACCGAAGTCACTGGCTTCTGCATAGATTTATTCAAGGCTATGTTAAAAGTTTTGCCTTACTTTCTGCGATATGAATTTATCCCATTTGCAAAGCCCAATGGTGAACCTGCAGGGTCATACAGTGAGTTGATAAGCCAAGTCTATTATGGGAAATATGATGCAGTGGTGGGGGATGTAGCAATTATAGCAAATAGATCGAACTATGTGGATTTCACAATGCCATACACAGAATCAGGAGTAACTATGATTGTTGCACTCAAAGATGACAGGAAGAAGAATGTATGGGCATTCTTGAAGCCATTAACTAGTGACCTCTGGGCAACAGCTGGTTGTTTCTTCGTGTTCATTGGTTTTGTTGTTTGGATCCTGGAACATCGAGTAAACAAAAGTTTTAGAGGTCCTCCTTCGCATCAGATTGGCACCAGCTTGTGGTTTTCTTTCTCAACCATGGTGTCATCTCATGGGGAGAAAGTGGTGAGCAACTTGGCCAGATTTGTAGTGATCATATGGATTTTCGTAGTATTAATTCTAGTTCAAAGCTATACTGCGAGTCTCACATCATTGTTGACAGTTGAGCAGTTACGCCCAGCAGTTACAAATGTTAATGAATTGGTAAATAGAAAGCTAAACGTGGGCTGCAGAAAAAATTCTTTTGTGGAAAAGCTATTGAAAGGAGTGGGCGTTCAAGATTACCAATTCAAATACTTCAATTCAACAGAAGATTGCAATGATCTTTTGACAAAAGGTAGTGAAAATGGAGGCATTGCTGCTGCCTTCGATGAAATTCCTTACGCAAAACTCTTTATGGGAACCTACTGCTCTAAGTTCGTCTCGCTGGGAACAATTTTTAAAACTGGAGGCCTTGGCTTTGTCTTTCCTAAGGGTTCTCCTTTCGTTGCTGAGATTTCAAGGGCAATACTGAATGTAACTCAAGGGGCTGAAATGAGAAAAATAGAGAACGCATGGTTCAATAAAAACAGTTGTGTGCAGTCGGGTGCTCCAGTTTCTTCTGATAGTCTAGGCCTTGAGAGCTTTTGGGGTTTGTTTCTCATTGCAGGAATTTCTTCAGCAGTAGCACTCACCATCTTTACCATTGAATTCTTAAATGAGAATAGACATAATTGGGCAGTGCACTACAATCCCAGGATTTCAATCTGGAGACGACTTGTGATATTGCTAAAGATATTTGACCAGAGAAATGAGGACTCTCACACCTTTAAGAAGAAGGAAGTGCGAGATAGGAGGGAAGGTGGTAGTAGTAATCATGGATTGGATGTAGAAGCGTCTCCAGCATCACCCTGCCCTCCAAGTCCCTCATGCCAGGCTGAATCAAACTTTTCATTTGAGGGAGATCATGCAAATGGTTTCAGGAGAGGCTGA 2565 0.4199 MDLIETEEVQAIIGPLTSMQANFVISLGNRARVPIVTFSATSPYLASLGSPYFFRFAQNDSAQVNAIRAIVEAFGWKEAVPIYIDNDYGKGVIPFLTDALQQVNVRIPYLSAIFPSATDEDITEELYKLMTMQTRVFIVHMSSDLGSTLFTLAQKIGMMAEGYVWIITNGLANELSSLNSSVIESMQGVLAVRTYIPKTKELEDFKVRWKIKFLQDNPTFAGSNLNVLGLWAYDATTALAMAVEKVGTTNFVFLKTRASVNLTGLERLGVSVNGENLREALSNTIFRGLSGEFKVGDEQLQTSTFEITNVIGNGERRIGFWTSQRGLVRRLDSTNTSINSLSKNSFGPIIWPGDTHSIPKGWDNPTNAQKMRIGVPVRTGYTELVKITHDPITNRTEVTGFCIDLFKAMLKVLPYFLRYEFIPFAKPNGEPAGSYSELISQVYYGKYDAVVGDVAIIANRSNYVDFTMPYTESGVTMIVALKDDRKKNVWAFLKPLTSDLWATAGCFFVFIGFVVWILEHRVNKSFRGPPSHQIGTSLWFSFSTMVSSHGEKVVSNLARFVVIIWIFVVLILVQSYTASLTSLLTVEQLRPAVTNVNELVNRKLNVGCRKNSFVEKLLKGVGVQDYQFKYFNSTEDCNDLLTKGSENGGIAAAFDEIPYAKLFMGTYCSKFVSLGTIFKTGGLGFVFPKGSPFVAEISRAILNVTQGAEMRKIENAWFNKNSCVQSGAPVSSDSLGLESFWGLFLIAGISSAVALTIFTIEFLNENRHNWAVHYNPRISIWRRLVILLKIFDQRNEDSHTFKKKEVRDRREGGSSNHGLDVEASPASPCPPSPSCQAESNFSFEGDHANGFRRG 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1137 854 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 796 IPR015683 -
Prci2g1137 854 FunFam Glutamate receptor 370 489 - -
Prci2g1137 854 SUPERFAMILY Periplasmic binding protein-like II 349 721 - -
Prci2g1137 854 FunFam Glutamate receptor 489 619 - -
Prci2g1137 854 Gene3D - 61 223 - -
Prci2g1137 854 FunFam Glutamate receptor 270 369 - -
Prci2g1137 854 Gene3D - 372 488 - -
Prci2g1137 854 SMART GluR_14 372 720 IPR001320 GO:0015276|GO:0016020
Prci2g1137 854 Gene3D - 489 619 - -
Prci2g1137 854 Pfam Ligand-gated ion channel 720 749 IPR001320 GO:0015276|GO:0016020
Prci2g1137 854 Gene3D - 224 371 - -
Prci2g1137 854 MobiDBLite consensus disorder prediction 802 816 - -
Prci2g1137 854 FunFam Glutamate receptor 65 222 - -
Prci2g1137 854 Pfam Bacterial extracellular solute-binding proteins, family 3 395 719 IPR001638 -
Prci2g1137 854 CDD PBP1_GABAb_receptor_plant 1 331 IPR044440 -
Prci2g1137 854 Pfam Receptor family ligand binding region 2 312 IPR001828 -
Prci2g1137 854 PIRSF IGluLR_plant 1 842 IPR017103 -
Prci2g1137 854 Gene3D - 624 725 - -
Prci2g1137 854 CDD GluR_Plant 369 718 - -
Prci2g1137 854 MobiDBLite consensus disorder prediction 802 854 - -
Prci2g1137 854 SUPERFAMILY Voltage-gated potassium channels 500 584 - -
Prci2g1137 854 SUPERFAMILY Periplasmic binding protein-like I 1 362 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1137 Prci-Chr2 8363653 8367111 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1137 1 723 Ion Channels AT2G24720 52.820 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1137 K05387 - qsa:O6P43_019170 1107.05