Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1136 ATGCCTCTCATTCTCATTACAGAACTAGGCTCGTCTTCAATGTCAAGGACTCTCGCAGAGGCGTCGTTGCTGCCGCTGCCCAAGGCCAACTTTGTGATCAGTCTAGGAAACAGAGCTCGTGTGCCCATTGTAACATTCTCAGCAACGAGTCCTTATCTTGCTTCACTTGGGAGTCCATATTTTTTTCGATTTGCACAAAATGATTCGGCTCAAGTGAATGCCATTAGAGCGATCGTGGAAGCTTTTGGGTGGAAAGAAGCAGTGCCCATTTACATCGACAACGATTATGGGAAGGGGGTCATACCCTTCTTAACTGATGCTCTGCAACAAGTGAATGTACGAATCCCATATCTCAGTGCCATTTTCCCTTCAGCCACTGATGAAGATATTACAGAAGAGCTCTACAAGCTAATGACCATGCAAACCAGAGTGTTCATTGTTCACATGTCTTCTGATCTTGGCTCCACTCTCTTCACCTTAGCACAGAAGATTGGAATGATGGCAGAGGGATATGTTTGGATCATCACTAACGGTTTGGCAAATGAGTTGAGCTCTTTGAATTCCTCTGTGATAGAATCAATGCAGGGTGTATTGGCAGTGAGGACCTATATTCCCAAAACGAAAGAGCTAGAGGATTTTAAGGTTCGATGGAAAATAAAGTTCCTGCAAGACAATCCAACTTTTGCTGGTTCAAATTTGAATGTTTTAGGGCTCTGGGCTTATGATGCTACCACCGCATTAGCTATGGCGGTTGAGAAAGTTGGCACCACAAACTTCGTCTTCCTGAAGACCAGAGCTTCAGTAAACTTGACTGGTCTTGAAAGGCTCGGAGTTTCGGTAAATGGAGAAAATCTTCGTGAAGCATTATCAAACACCATATTCAGAGGCCTAAGTGGAGAGTTCAAAGTTGGTGACGAGCAGTTGCAAACATCGACATTTGAGATTACTAATGTGATTGGTAACGGAGAAAGGAGGATAGGATTTTGGACATCACAGAGGGGACTAGTTAGAAGGCTGGATTCAACGAACACAAGCATAAATTCTTTATCCAAAAACAGTTTTGGACCAATCATATGGCCAGGGGATACTCACTCTATTCCAAAGGGTTGGGACAATCCTACAAATGCTCAAAAGATGAGGATTGGAGTTCCAGTGAGAACTGGTTACACTGAATTAGTGAAAATAACTCACGATCCTATCACTAATAGAACCGAAGTCACTGGCTTCTGCATAGATTTATTCAAGGCTATGTTAAAAGTTTTGCCTTACTTTCTGCGATATGAATTTATCCCATTTGCAAAGCCCAATGGTGAACCTGCAGGGTCATACAGTGAGTTGATAAGCCAAGTCTATTATGGGAAATATGATGCAGTGGTGGGGGATGTAGCAATTATAGCAAATAGATCGAACTATGTGGATTTCACAATGCCATACACAGAATCAGGAGTAACTATGATTGTTGCACTCAAAGATGACAGGAAGAAGAATGTATGGGCATTCTTGAAGCCATTAACTAGTGACCTCTGGGCAACAGCTGGTTGTTTCTTCGTGTTCATTGGTTTTGTTGTTTGGATCCTGGAACATCGAGTAAACAAAAGTTTTAGAGGTCCTCCTTCGCATCAGATTGGCACCAGCTTGTGGTTTTCTTTCTCAACCATGGTGTCATCTCATGGGGAGAAAGTGGTGAGCAACTTGGCCAGATTTGTAGTGATCATATGGATTTTCGTAGTATTAATTCTAGTTCAAAGCTATACTGCGAGTCTCACATCATTGTTGACAGTTGAGCAGTTACGCCCAGCAGTTACAAATGTTAATGAATTGGTAAATAGAAAGCTAAACGTGGGCTGCAGAAAAAATTCTTTTGTGGAAAAGCTATTGAAAGGAGTGGGCGTTCAAGATTACCAATTCAAATACTTCAATTCAACAGAAGATTGCAATGATCTTTTGACAAAAGGTAGTGAAAATGGAGGCATTGCTGCTGCCTTCGATGAAATTCCTTACGCAAAACTCTTTATGGGAACCTACTGCTCTAAGTTCGTCTCGCTGGGAACAATTTTTAAAACTGGAGGCCTTGGCTTTGTCTTTCCTAAGGGTTCTCCTTTCGTTGCTGAGATTTCAAGGGCAATACTGAATGTAACTCAAGGGGCTGAAATGAGAAAAATAGAGAACGCATGGTTCAATAAAAACAGTTGTGTGCAGTCGGGTGCTCCAGTTTCTTCTGATAGTCTAGGCCTTGAGAGCTTTTGGGGTTTGTTTCTCATTGCAGGAATTTCTTCAGCAGTAGCACTCACCATCTTTACCATTGAATTCTTAAATGAGAATAGACATAATTGGGCAGTGCACTACAATCCCAGGATTTCAATCTGGAGACGACTTGTGATATTGCTAAAGATATTTGACCAGAGAAATGAGGACTCTCACACCTTTAAGAAGAAGGAAGTGCGAGATAGGAGGGAAGGTGGTAGTAGTAATCATGGATTGGATGTAGAAGCGTCTCCAGCATCACCCTGCCCTCCAAGTCCCTCATGCCAGGCTGAATCAAACTTTTCATTTGAGGGAGATCATGCAAATGGTTTCAGGAGAGGCTGA 2589 0.4229 MPLILITELGSSSMSRTLAEASLLPLPKANFVISLGNRARVPIVTFSATSPYLASLGSPYFFRFAQNDSAQVNAIRAIVEAFGWKEAVPIYIDNDYGKGVIPFLTDALQQVNVRIPYLSAIFPSATDEDITEELYKLMTMQTRVFIVHMSSDLGSTLFTLAQKIGMMAEGYVWIITNGLANELSSLNSSVIESMQGVLAVRTYIPKTKELEDFKVRWKIKFLQDNPTFAGSNLNVLGLWAYDATTALAMAVEKVGTTNFVFLKTRASVNLTGLERLGVSVNGENLREALSNTIFRGLSGEFKVGDEQLQTSTFEITNVIGNGERRIGFWTSQRGLVRRLDSTNTSINSLSKNSFGPIIWPGDTHSIPKGWDNPTNAQKMRIGVPVRTGYTELVKITHDPITNRTEVTGFCIDLFKAMLKVLPYFLRYEFIPFAKPNGEPAGSYSELISQVYYGKYDAVVGDVAIIANRSNYVDFTMPYTESGVTMIVALKDDRKKNVWAFLKPLTSDLWATAGCFFVFIGFVVWILEHRVNKSFRGPPSHQIGTSLWFSFSTMVSSHGEKVVSNLARFVVIIWIFVVLILVQSYTASLTSLLTVEQLRPAVTNVNELVNRKLNVGCRKNSFVEKLLKGVGVQDYQFKYFNSTEDCNDLLTKGSENGGIAAAFDEIPYAKLFMGTYCSKFVSLGTIFKTGGLGFVFPKGSPFVAEISRAILNVTQGAEMRKIENAWFNKNSCVQSGAPVSSDSLGLESFWGLFLIAGISSAVALTIFTIEFLNENRHNWAVHYNPRISIWRRLVILLKIFDQRNEDSHTFKKKEVRDRREGGSSNHGLDVEASPASPCPPSPSCQAESNFSFEGDHANGFRRG 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1136 862 Gene3D - 380 496 - -
Prci2g1136 862 PIRSF IGluLR_plant 25 850 IPR017103 -
Prci2g1136 862 SUPERFAMILY Periplasmic binding protein-like I 31 370 IPR028082 -
Prci2g1136 862 Pfam Receptor family ligand binding region 29 320 IPR001828 -
Prci2g1136 862 FunFam Glutamate receptor 278 377 - -
Prci2g1136 862 FunFam Glutamate receptor 378 497 - -
Prci2g1136 862 Gene3D - 497 627 - -
Prci2g1136 862 CDD PBP1_GABAb_receptor_plant 29 339 IPR044440 -
Prci2g1136 862 MobiDBLite consensus disorder prediction 810 824 - -
Prci2g1136 862 Pfam Ligand-gated ion channel 728 757 IPR001320 GO:0015276|GO:0016020
Prci2g1136 862 SUPERFAMILY Voltage-gated potassium channels 508 592 - -
Prci2g1136 862 SMART GluR_14 380 728 IPR001320 GO:0015276|GO:0016020
Prci2g1136 862 Pfam Bacterial extracellular solute-binding proteins, family 3 403 727 IPR001638 -
Prci2g1136 862 Gene3D - 69 231 - -
Prci2g1136 862 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 28 804 IPR015683 -
Prci2g1136 862 SUPERFAMILY Periplasmic binding protein-like II 357 729 - -
Prci2g1136 862 Gene3D - 232 379 - -
Prci2g1136 862 CDD GluR_Plant 377 726 - -
Prci2g1136 862 Gene3D - 632 733 - -
Prci2g1136 862 MobiDBLite consensus disorder prediction 810 862 - -
Prci2g1136 862 FunFam Glutamate receptor 497 627 - -
Prci2g1136 862 FunFam Glutamate receptor 73 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1136 Prci-Chr2 8363540 8367111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1136 28 731 Ion Channels AT2G24720 52.542 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1136 K05387 - qsa:O6P43_019170 1080.09