Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1135 ATGAAGAAGAGTGCTAAAGTTATTGAAGCCCTCACCTTCTATTGCTCTGTGATTCTGTGTTTGAAGCTGGGCCTCTCACAAAGCAACACAACAGAGCCAGTGAAGGTGGGAGTTTTGCTTGATCTTGCCCAAACAACCGGCAAGATAGGATTGAGCTGCATCAGCATGTCCCTCTCTGACTTCTATGCCTCTCATTCTCATTACAGAACTAGGCTCGTCTTCAATGTCAAGGACTCTCGCAGAGGCGTCGTTGCTGCCGCTGCCCAAGCCATGGATCTCATAGAAACAGAGGAAGTGCAAGCCATAATAGGACCGTTGACATCGATGCAGGCCAACTTTGTGATCAGTCTAGGAAACAGAGCTCGTGTGCCCATTGTAACATTCTCAGCAACGAGTCCTTATCTTGCTTCACTTGGGAGTCCATATTTTTTTCGATTTGCACAAAATGATTCGGCTCAAGTGAATGCCATTAGAGCGATCGTGGAAGCTTTTGGGTGGAAAGAAGCAGTGCCCATTTACATCGACAACGATTATGGGAAGGGGGTCATACCCTTCTTAACTGATGCTCTGCAACAAGTGAATGTACGAATCCCATATCTCAGTGCCATTTTCCCTTCAGCCACTGATGAAGATATTACAGAAGAGCTCTACAAGCTAATGACCATGCAAACCAGAGTGTTCATTGTTCACATGTCTTCTGATCTTGGCTCCACTCTCTTCACCTTAGCACAGAAGATTGGAATGATGGCAGAGGGATATGTTTGGATCATCACTAACGGTTTGGCAAATGAGTTGAGCTCTTTGAATTCCTCTGTGATAGAATCAATGCAGGGTGTATTGGCAGTGAGGACCTATATTCCCAAAACGAAAGAGCTAGAGGATTTTAAGGTTCGATGGAAAATAAAGTTCCTGCAAGACAATCCAACTTTTGCTGGTTCAAATTTGAATGTTTTAGGGCTCTGGGCTTATGATGCTACCACCGCATTAGCTATGGCGGTTGAGAAAGTTGGCACCACAAACTTCGTCTTCCTGAAGACCAGAGCTTCAGTAAACTTGACTGGTCTTGAAAGGCTCGGAGTTTCGGTAAATGGAGAAAATCTTCGTGAAGCATTATCAAACACCATATTCAGAGGCCTAAGTGGAGAGTTCAAAGTTGGTGACGAGCAGTTGCAAACATCGACATTTGAGATTACTAATGTGATTGGTAACGGAGAAAGGAGGATAGGATTTTGGACATCACAGAGGGGACTAGTTAGAAGGCTGGATTCAACGAACACAAGCATAAATTCTTTATCCAAAAACAGTTTTGGACCAATCATATGGCCAGGGGATACTCACTCTATTCCAAAGGGTTGGGACAATCCTACAAATGCTCAAAAGATGAGGATTGGAGTTCCAGTGAGAACTGGTTACACTGAATTAGTGAAAATAACTCACGATCCTATCACTAATAGAACCGAAGTCACTGGCTTCTGCATAGATTTATTCAAGGCTATGTTAAAAGTTTTGCCTTACTTTCTGCGATATGAATTTATCCCATTTGCAAAGCCCAATGGTGAACCTGCAGGGTCATACAGTGAGTTGATAAGCCAAGTCTATTATGGGAAATATGATGCAGTGGTGGGGGATGTAGCAATTATAGCAAATAGATCGAACTATGTGGATTTCACAATGCCATACACAGAATCAGGAGTAACTATGATTGTTGCACTCAAAGATGACAGGAAGAAGAATGTATGGGCATTCTTGAAGCCATTAACTAGTGACCTCTGGGCAACAGCTGGTTGTTTCTTCGTGTTCATTGGTTTTGTTGTTTGGATCCTGGAACATCGAGTAAACAAAAGTTTTAGAGGTCCTCCTTCGCATCAGATTGGCACCAGCTTGTGGTTTTCTTTCTCAACCATGGTGTCATCTCATGGGGAGAAAGTGGTGAGCAACTTGGCCAGATTTGTAGTGATCATATGGATTTTCGTAGTATTAATTCTAGTTCAAAGCTATACTGCGAGTCTCACATCATTGTTGACAGTTGAGCAGTTACGCCCAGCAGTTACAAATGTTAATGAATTGGTAAATAGAAAGCTAAACGTGGGCTGCAGAAAAAATTCTTTTGTGGAAAAGCTATTGAAAGGAGTGGGCGTTCAAGATTACCAATTCAAATACTTCAATTCAACAGAAGATTGCAATGATCTTTTGACAAAAGGTAGTGAAAATGGAGGCATTGCTGCTGCCTTCGATGAAATTCCTTACGCAAAACTCTTTATGGGAACCTACTGCTCTAAGTTCGTCTCGCTGGGAACAATTTTTAAAACTGGAGGCCTTGGCTTTGTCTTTCCTAAGGGTTCTCCTTTCGTTGCTGAGATTTCAAGGGCAATACTGAATGTAACTCAAGGGGCTGAAATGAGAAAAATAGAGAACGCATGGTTCAATAAAAACAGTTGTGTGCAGTCGGGTGCTCCAGTTTCTTCTGATAGTCTAGGCCTTGAGAGCTTTTGGGGTTTGTTTCTCATTGCAGGAATTTCTTCAGCAGTAGCACTCACCATCTTTACCATTGAATTCTTAAATGAGAATAGACATAATTGGGCAGTGCACTACAATCCCAGGATTTCAATCTGGAGACGACTTGTGATATTGCTAAAGATATTTGACCAGAGAAATGAGGACTCTCACACCTTTAAGAAGAAGGAAGTGCGAGATAGGAGGGAAGGTGGTAGTAGTAATCATGGATTGGATGTAGAAGCGTCTCCAGCATCACCCTGCCCTCCAAGTCCCTCATGCCAGGCTGAATCAAACTTTTCATTTGAGGGAGATCATGCAAATGGTTTCAGGAGAGGCTGA 2835 0.4268 MKKSAKVIEALTFYCSVILCLKLGLSQSNTTEPVKVGVLLDLAQTTGKIGLSCISMSLSDFYASHSHYRTRLVFNVKDSRRGVVAAAAQAMDLIETEEVQAIIGPLTSMQANFVISLGNRARVPIVTFSATSPYLASLGSPYFFRFAQNDSAQVNAIRAIVEAFGWKEAVPIYIDNDYGKGVIPFLTDALQQVNVRIPYLSAIFPSATDEDITEELYKLMTMQTRVFIVHMSSDLGSTLFTLAQKIGMMAEGYVWIITNGLANELSSLNSSVIESMQGVLAVRTYIPKTKELEDFKVRWKIKFLQDNPTFAGSNLNVLGLWAYDATTALAMAVEKVGTTNFVFLKTRASVNLTGLERLGVSVNGENLREALSNTIFRGLSGEFKVGDEQLQTSTFEITNVIGNGERRIGFWTSQRGLVRRLDSTNTSINSLSKNSFGPIIWPGDTHSIPKGWDNPTNAQKMRIGVPVRTGYTELVKITHDPITNRTEVTGFCIDLFKAMLKVLPYFLRYEFIPFAKPNGEPAGSYSELISQVYYGKYDAVVGDVAIIANRSNYVDFTMPYTESGVTMIVALKDDRKKNVWAFLKPLTSDLWATAGCFFVFIGFVVWILEHRVNKSFRGPPSHQIGTSLWFSFSTMVSSHGEKVVSNLARFVVIIWIFVVLILVQSYTASLTSLLTVEQLRPAVTNVNELVNRKLNVGCRKNSFVEKLLKGVGVQDYQFKYFNSTEDCNDLLTKGSENGGIAAAFDEIPYAKLFMGTYCSKFVSLGTIFKTGGLGFVFPKGSPFVAEISRAILNVTQGAEMRKIENAWFNKNSCVQSGAPVSSDSLGLESFWGLFLIAGISSAVALTIFTIEFLNENRHNWAVHYNPRISIWRRLVILLKIFDQRNEDSHTFKKKEVRDRREGGSSNHGLDVEASPASPCPPSPSCQAESNFSFEGDHANGFRRG 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1135 944 MobiDBLite consensus disorder prediction 892 944 - -
Prci2g1135 944 FunFam Glutamate receptor 360 459 - -
Prci2g1135 944 Pfam Receptor family ligand binding region 54 402 IPR001828 -
Prci2g1135 944 Gene3D - 151 313 - -
Prci2g1135 944 SUPERFAMILY Periplasmic binding protein-like I 31 452 IPR028082 -
Prci2g1135 944 PIRSF IGluLR_plant 4 932 IPR017103 -
Prci2g1135 944 FunFam Glutamate receptor 460 579 - -
Prci2g1135 944 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 34 884 IPR015683 -
Prci2g1135 944 FunFam Glutamate receptor 579 709 - -
Prci2g1135 944 Gene3D - 314 461 - -
Prci2g1135 944 SMART GluR_14 462 810 IPR001320 GO:0015276|GO:0016020
Prci2g1135 944 CDD GluR_Plant 459 808 - -
Prci2g1135 944 MobiDBLite consensus disorder prediction 892 906 - -
Prci2g1135 944 Gene3D - 714 815 - -
Prci2g1135 944 Pfam Ligand-gated ion channel 810 839 IPR001320 GO:0015276|GO:0016020
Prci2g1135 944 Gene3D - 579 709 - -
Prci2g1135 944 Pfam Bacterial extracellular solute-binding proteins, family 3 485 809 IPR001638 -
Prci2g1135 944 SUPERFAMILY Voltage-gated potassium channels 590 674 - -
Prci2g1135 944 Gene3D - 462 578 - -
Prci2g1135 944 FunFam Glutamate receptor 155 312 - -
Prci2g1135 944 CDD PBP1_GABAb_receptor_plant 35 421 IPR044440 -
Prci2g1135 944 SUPERFAMILY Periplasmic binding protein-like II 439 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1135 Prci-Chr2 8363491 8367111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1135 11 924 Ion Channels AT2G29100 49.836 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1135 K05387 - qsa:O6P43_019170 1179.47