Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1134 ATGAAGAAGCTCGTGTGCCTTCTGCTCTTCCTTATCTGGACTCTTGCTTGTTTCCTGCGCGCAGCAGTAGCTCAGACCAGCGAAACCGTGCCGGTGAAAGTAGGAATCGTACTTGATCTTTCGTCTTCCACGGCGAAGATGGGGCTGACCTGCATCAACATGTCCCTCTCTGAGTTCTACGCCTCTCATTCTCATTACAAAACTAGGCTCGCTTTCTTCGTCAGGGACTCCTCGAGAGACGTCGTTACTGCTGCTGCTCGAGCTATCGATCTCATCAAAACAGAACTAGTGCAAGCCATAATAGGACCATCGACATCAATGGAGGCCAACTTTGTGATCAGTCTTGGAGCGGAAGCCCATGTGCCCATCGTAACCTTCTCGGCAACGAGTACTTCTCTTGCTTCTCTGGGGAGCCCATACTTCTTTCAGATTGCACACAACGATTCGGCTCAAGTAAATGCAATTAGCTCAATCGTGCAAGCTTTTCGGTGGAAAGAGGCAGTGCCCATTTACGTGGACAACGGTTATGGACAGGGGGTCGTGCCCTTCTTAATTAATTCTCTTCAACAAGCTTATGTTCGAATCCCATATCAGAGTGCCATTTCACCTTCAGCCACGGACGAAGAGATGAAAACAGAGCTCAAAAAGTTGATGACCAAGCAAACCAGAGTGTTTGTCGTGCATATGCCCACCAATATTGGCACTCGTCTCTTCCCCATAGCAAAACAGATCGGTATGATGAGCAGAGGCTATGTTTGGATAATAACCGATGGTTTGGGCAATGCGTTGAATTCCTTCGATTCCTCAGTCATAGAATCAATGCAGGGAGTATTGGGTGTGAAGAGTTATGTTCCTAAAACGAAAAAACTCGATGATTTTAAAGTCAGATGGAAAAGAAGGTTCGCACAAGACAATCCAACCCTTGCGAGCACAAATCTGAACGCGTTTGGGTTATGGGCTTATGATGCAACCACAGCTTTAGCCATGGCTGTTGAGCAGGTCGGCACCCGCAATCTTGGGTTCGATGCGAGTAATGATTCGGGAAATTCTTATGATCTTGAAAGTCTGGGAGTTTCACGAAATGGGGAAACGCTGCGTGAAGCCTTATCCAGAATCAGATTTAGAGGCCTGAGTGGAGAGTTCAAAGTTGTTGATGGACAATTGCCAGCATCAACGTTTGAGATAGTAAACGTGGTTGCTAATGGGCAAAGAACCATAGGATTTTGGACATCACAAAATGGACTTGTCCGAAATCTCAATTCTACATCAAAGAAGGATCTAGCAGCAGTAATATGGCCAGGGGATACAAAATCTATTCCAAGGGGTTGGGAAATCCCTATAAATGGAACAAAGTTGAGGGTAGGCGTACCAGTGAAAGCAGGTTACACGGAATTTGTGAAGGCGACTTTTAATCCAGCCACAAATCAAACAGAAATCACTGGATTCTGCATCGACGTGTTCAAGGCTGTGGTGCGTGCGTTACCGTATGAACTGCCATATGAATTCATCCCATTTCCTAAGATGGAAGCTGTGATTAGTACAACTCCAATATACAACGACCTCATCACCCAAGTATATTTAGGGAACTTTGACGCGGCGGTGGGGGATGTGACGATCATAGCAAACAGGTCCAACTATGTGGATTTCACTTTGCCGTACACTGAATCTGGCGTAACAATGATAGTTCCGGTGAAAGACAAGAGGAAGAAGAATGCGTGGGCCTTCTTAGGGCCATTGACTTGGGATCTTTGGGTGACAATGGCTTGTTCCTTTGTATTTATTGGGTTCGTTGTGTGGGTGCTTGAACACCGAATAAACGAACATTTCAGAGGGCCTCCGTCGCACCAGATTGGCACCAGCTTATGGTTTTCTTTCTCGATCATGGTTTTTGCCCATCGAGAGAGAGTGGTGAGCAACTTGAGTAGATTTGTGGTGATCATATGGATATTTGTAGTTTTGATTCTGATTCAAAGTTACACTGCGAGTTTGACGTCGCTCTTGACGGTTGAACAGCTTACCCCAACTGTGGATGACGTGAATCTACTCATAAAGAATAGACTGAATGTTGGTTATATGGAAGGTTCTTTTGTGTATGGAGTTTTGAAGGATATGGGTTTTCAAGATTATCAACTCAAAATTTATAATTCCATTGAAAGTTTCCATAAATTATTTGAAAGGGGAGTTGAAAATGGTGGAATTGCTGCTGCGTTTGATGAAATTCCATATGTAAAACTCTTTCTTGGGAATTATTGCTCCAAGTATACCATGGCCGATCCAACTTTTAAAACTGGGGGCTTTGGCTTTGTTTTCCCAAAAGAGTTTCCTCTTGTAGCTGACATTTCTAGAGCAATCTTGAACGTGACACAAGGGAATAAAATGAAAAGACTAGAGAGTGAATGGTTCAATGGAAATAATTGTCCAGATTCCAAGGCCTTGGTTTCCTCAACTAGCCTTGGCCTTGAGAGCTTCTGGGGCTTATTCCTCATCGCAGGACTTGCTTCTATATTAGCACTCATCATCTTCGCGGTCACATTCCTATACCAAAATAGAAATATTTGGTCACTCTATAATCCCGGCGCATCAATATGGACGCGAATAAAGATGTTGGTAAGGATTTTTGACCAAAGAGACGAGAGCTCTCACACTTTCAAGAGAAAGGAAGACAAGAGTGAAGCTGCTAGCACTCATGGGCCAAGTGCAATGGAGGCGTCTCCAACATCACAGTGTCCCCCAAGTCCATCAAGTGAAGCTGAATCTGATTTTTCCTTTAATGGAGACGGTGCAGTGTGTTCTGAAGAGTTCAATGAGGCTTATCCAAATAGCTTTCTGCCTCAAAACGTGGAGATAACCGTCCGGCATTGGATACAGCCTACTTAA 2877 0.4442 MKKLVCLLLFLIWTLACFLRAAVAQTSETVPVKVGIVLDLSSSTAKMGLTCINMSLSEFYASHSHYKTRLAFFVRDSSRDVVTAAARAIDLIKTELVQAIIGPSTSMEANFVISLGAEAHVPIVTFSATSTSLASLGSPYFFQIAHNDSAQVNAISSIVQAFRWKEAVPIYVDNGYGQGVVPFLINSLQQAYVRIPYQSAISPSATDEEMKTELKKLMTKQTRVFVVHMPTNIGTRLFPIAKQIGMMSRGYVWIITDGLGNALNSFDSSVIESMQGVLGVKSYVPKTKKLDDFKVRWKRRFAQDNPTLASTNLNAFGLWAYDATTALAMAVEQVGTRNLGFDASNDSGNSYDLESLGVSRNGETLREALSRIRFRGLSGEFKVVDGQLPASTFEIVNVVANGQRTIGFWTSQNGLVRNLNSTSKKDLAAVIWPGDTKSIPRGWEIPINGTKLRVGVPVKAGYTEFVKATFNPATNQTEITGFCIDVFKAVVRALPYELPYEFIPFPKMEAVISTTPIYNDLITQVYLGNFDAAVGDVTIIANRSNYVDFTLPYTESGVTMIVPVKDKRKKNAWAFLGPLTWDLWVTMACSFVFIGFVVWVLEHRINEHFRGPPSHQIGTSLWFSFSIMVFAHRERVVSNLSRFVVIIWIFVVLILIQSYTASLTSLLTVEQLTPTVDDVNLLIKNRLNVGYMEGSFVYGVLKDMGFQDYQLKIYNSIESFHKLFERGVENGGIAAAFDEIPYVKLFLGNYCSKYTMADPTFKTGGFGFVFPKEFPLVADISRAILNVTQGNKMKRLESEWFNGNNCPDSKALVSSTSLGLESFWGLFLIAGLASILALIIFAVTFLYQNRNIWSLYNPGASIWTRIKMLVRIFDQRDESSHTFKRKEDKSEAASTHGPSAMEASPTSQCPPSPSSEAESDFSFNGDGAVCSEEFNEAYPNSFLPQNVEITVRHWIQPT 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1134 958 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 885 IPR015683 -
Prci2g1134 958 MobiDBLite consensus disorder prediction 881 924 - -
Prci2g1134 958 FunFam Glutamate receptor 451 572 - -
Prci2g1134 958 Pfam Bacterial extracellular solute-binding proteins, family 3 471 802 IPR001638 -
Prci2g1134 958 CDD GluR_Plant 451 801 - -
Prci2g1134 958 PIRSF IGluLR_plant 1 933 IPR017103 -
Prci2g1134 958 Gene3D - 572 699 - -
Prci2g1134 958 SMART GluR_14 451 803 IPR001320 GO:0015276|GO:0016020
Prci2g1134 958 FunFam Glutamate receptor 572 702 - -
Prci2g1134 958 CDD PBP1_GABAb_receptor_plant 33 419 IPR044440 -
Prci2g1134 958 FunFam Glutamate receptor 151 311 - -
Prci2g1134 958 Gene3D - 67 390 - -
Prci2g1134 958 Pfam Receptor family ligand binding region 51 399 IPR001828 -
Prci2g1134 958 MobiDBLite consensus disorder prediction 897 921 - -
Prci2g1134 958 SUPERFAMILY Periplasmic binding protein-like II 427 804 - -
Prci2g1134 958 Gene3D - 751 808 - -
Prci2g1134 958 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Prci2g1134 958 FunFam Glutamate receptor 358 450 - -
Prci2g1134 958 Gene3D - 445 571 - -
Prci2g1134 958 Pfam Ligand-gated ion channel 803 833 IPR001320 GO:0015276|GO:0016020
Prci2g1134 958 SUPERFAMILY Periplasmic binding protein-like I 32 444 IPR028082 -
Prci2g1134 958 Gene3D - 147 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1134 Prci-Chr2 8347975 8351868 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1134 10 918 Ion Channels AT2G29120 50.436 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1134 K05387 - qsa:O6P43_019170 1183.32