Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1106 ATGGGAATATATCTTAGCAGTCCCAAAACTGAGAAGTTTTCTGAAGATGGTGAGAACAACTATCTTAGATATGGTTTATCATCCATGCAAGGTTGGCGTGCAACAATGGAAGATGCTCATGCTGCTTATCCAGATCTTGATGCGTCCACTTCGTTTTTTGGTGTTTATGATGGTCATGGAGGTAAGGTGGTTGCTAAGTTTTGTGCTAAGTATCTTCACCAACAGGTGCTCAAAAGTGAAGCATATACAGCTGGAGATATAGGAACCTCTCTTCAGAAAGCTTTTTTCAGAATGGATGAGATGATGCGTGGTCAGAGGGGATGGAGGGAATTAGCTGTCTTAGGTGATAAGATAAACAAGTTTACTGGGATGATAGAAGGATTGATTTGGTCTCCACGAAGCAGTGATGGTACTGACCAGGTTGATGATTGGGCCTTTGAGGAGGGACCTCATTCTGATTTTGCTGGACCTACTTCAGGAAGCACTGCCTGTGTTGCAGTAATTAGAAACAACCTACTTCTTGTTGCAAATGCTGGGGATTCAAGATGTGTGATATCTAGGAAGGGTCAGGCATATAATTTATCTAGAGACCACAAACCTGATCTTGAGATTGAGAAGGAAAGAATCTTAAAAGCTGGCGGTTTTATTCATGCGGGGCGAGTTAATGGCAGTTTAAATCTTGCAAGAGCTATAGGTGACATGGAATTTAAACAGAATAAATTTCTGCCCGCTGATAAACAAATTGTGACTGCCAATCCTGATATAAACACTGTGGAGCTTTGTGATGAAGATGAGTTTCTAGTGCTAGCATGTGACGGAATATGGGATTGCTTATCCAGCCAGCAATTGGTAGATTATGTGCATGAACAGTTGCTGTCGGAAACGAAACTCTCAACCGTATGTGAGAGAGTACTTGATCGGTGTTTGGCACCATCAACTGTTGGAGGCGAGGGATGTGATAACATGACAATGATCCTGGTGCAATTCAAGAAACCCACCCGGTCCACTGAAGTAGCAGCAGAGCAATCCACTTCAAACGAACAAATTGAATCAATCTGA 1059 0.424 MGIYLSSPKTEKFSEDGENNYLRYGLSSMQGWRATMEDAHAAYPDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLKSEAYTAGDIGTSLQKAFFRMDEMMRGQRGWRELAVLGDKINKFTGMIEGLIWSPRSSDGTDQVDDWAFEEGPHSDFAGPTSGSTACVAVIRNNLLLVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPADKQIVTANPDINTVELCDEDEFLVLACDGIWDCLSSQQLVDYVHEQLLSETKLSTVCERVLDRCLAPSTVGGEGCDNMTMILVQFKKPTRSTEVAAEQSTSNEQIESI 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1106 352 Coils Coil 352 352 - -
Prci2g1106 352 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Prci2g1106 352 CDD PP2Cc 23 329 IPR001932 -
Prci2g1106 352 Gene3D - 1 330 IPR036457 -
Prci2g1106 352 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Prci2g1106 352 PANTHER PROTEIN PHOSPHATASE 2C 18 328 IPR015655 GO:0004722|GO:0006470
Prci2g1106 352 SMART PP2C_4 13 327 IPR001932 -
Prci2g1106 352 SMART PP2C_SIG_2 28 329 IPR001932 -
Prci2g1106 352 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Prci2g1106 352 Pfam Protein phosphatase 2C 153 313 IPR001932 -
Prci2g1106 352 Pfam Protein phosphatase 2C 23 103 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1106 Prci-Chr2 8205818 8212532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1106 1 335 PP2C-type Phosphatase Gene Family AT2G25070 80.000 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1106 K17499 - zju:107419763 645.195