Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1090 ATGAGATTAGTTCCTAATATAGATGGAGAGGGAGGTTGCTGTCCTATGTTTAGAATATATGGACAGGACCCTTTTATGGCTGCTGATCGGACTCCCAAAGTTCTGTTTTCCACTCCAAAAAGGAGCAAAGTTGTCCGGCATTACAAGCAGGCTGACTGTGAACTAGTAAAGATTGACATCCATTGTCATGTTCAAGGCGATGTTGTTCTTGAGTGTATTAGTCTGGATAGTGATTTGGAACGTGAGCAAATGATGTTTCGTGTCATGTTTAATACAGCATTCATCCGATCAAATATTTTGATGCTTAACCGTGATGAAATTGACACCTTGTGGAATAGTAAAGACCAATTTCTGAAAGATTTTAGAGTAGAGATTCTTTTCTCAGATATGGATGCTTCTTCTTCTGTTATTTCAATTGATATGCCTCGGCTTGAGGACAAAGAAGGCCTTCCTATTGAAGCATTTGCCAAGGTTCAAGAAATTTTCAGCAACGTTGATTGGCTAGACTCAAAAATAGAGGTAGTGAATGTGCTCCAACAGATCACAGCATCAAATAAGCTCCAGGAAATATTGGACAGTGGGGTTTCTGCTAGACCAAGCAACTTGCTAAAGGATTCATTGTCTGGAAGATTTAAATTTGATCCAACAACACTGCCTGAAAATGGTATCTCAAGTATGACTTCCACAGTTCCAGGAAAAACCAAAGAATCTATTCCTTCATATGAACCTTCTGTTGATCCTAATTCTCTCAAAAGGAGGATTGAACCTCAACATTTGCAGGTTTCTCTTCAGTTGCCCACCCAATCCAAAATCATTTCTCCACGGGTGCGTCAAGCTTCTCAATCTGCTCTGGTTTTATGTTGTAGTTCTTTACAAGGTTCACCTGTACCTATATCAAGATATCCTAGTGCACCATCAGCCTTGGGAATTACAGCTTTGTTGCAGGATCGTGCTGAAGGGATATCAACAAAGAAGTCAATCATGGAGTTACAGTGTCCCCTTCTTCTTCTACACTGTCCCCTTCTTGTTCCTCCAGTATCAACATCAGCATTGCTGCGATCTTTAGAACTGAATTCTTTGATGGACGTTCCTGCTGTCACGCATAACACTTCTGCTCAACTGCAGCCTACTTCAGAAATATTGCAACCTATTATCACTCAGCACCCAGAAAATATAGCGCCTGATAAAACTAGAAAACCATTGGTTTCTCCTTCTACACCTCAAACTCAATCTCAGCCTACTTCAGGATTGATGCAACCTGCTGTCACCCAACACCCTGAGAATATAGTGCACGACAAAGGTGAAAAGTCATTAGTTTCTCTTCTTCAACCTCCTCATCAACCTCAGATTTCTTCAGAATTGATGCAACCTTTTATCTTCCAGCAGCCTGAAAATACAACGCATGATAAAAGCAAAAAGTCATTAGTTTTTCCTCCTGCAACTCTGCCACCTCTTCCGGAGGCTATACAGAGTTCTGTTTCAACCCCTTCTCAGCCAACTGCAGTCCCTCTTTCTCCATCTTCTTCCTTGAAGAGCTCATTTTCGGCCCTTCCTTCACCACCTCCTGCCTCTCCACCATCCTCTTCTTTTCCTGAAATATCTCCACTTTCTGCCATCAAAAATTCTTTCAAAGCTCCCCCACCCCCACCTCCTTACCCAACTGCTGCTCCTCTTCTATCACCTTCGTCCACAAAGAGTTCATTGTCAACCCTTCTTCCTCCTAACCCACCCCCTCCGCCACTCTCTTCCTCTCCTCTATCACATGCCCTTGTAAAAAGTTCATTTGCATCTCCCCTTCTCCACCCCTCACTTCCTCACCCAGCACCAGTTCCTCTTCCTACATCTTCTTCCATGTCATTTTCACCCTCTCCTTCACCAGCTCCAGCCCCTCCATCACTCTCTTCCTTTCCTGTAAGATCTCCACATATCACTTCAGAAAATTCACTCAAAGCTGCCCCTCCCCCACCACCACCTCCACCTCGTGGGTATTCTAGAACCATGTCTGGCCCTATTCTTAGATCAACGGTACCGCCGCCCCCCCCTCCACCTGCTTCTCTAACCACAACTTTGTCAAAGAACTCTGCCATTGTTCCACTTGTACCTCCTCCCCCTTCTGCTAATGGGTTGTCAAAGGCCGGGACTTTACACCCTGGCACTGGTAATGGAAATGTACCTCCAGCTCCTGGACCACCTGGTGTTCTGGGCCGCCTAGTGTTCTTTGGTGTGAAGGGATGTGGCTTGTCACGACCAAATGCAAAAATTCAAACTCAAACTAAGAGGAGCAATCTCAAACCTTACCATTGGTTAAAATTAACAAGGGTTATGCATGGCAGTTTGTGGGCTGAGACACAGAAACCAGAGGAAGCTTCTAAGGCTCCAGAATTTGACATGTCAGAACTTGAGAGTCTTTTCTCTGCATCCACTCCAAATTCTAATCATGGAGGCAAAGGAGGAAAATCTAATCGTCTTGCCCCAGGGACGAAAACTGAGAAAGTTCAACTGGTTGAGCTAAGGCGAGCATATAATTGTGAGATAATGCTTACAAAAGTCAAAATCCCTTTGCCAGATTTAATGAGCTCTGTGCTTGCTTTGGATGATTCAGCATTGGATGCTGATCAGGTTGAGAATCTCATAAAGTTCTGTCCAACGAAGGAAGAGATGGAACTACTCAGGAACTGCACTGGAGATAAGGACAATTTAGGAAGGTGTGAACAGTTCTTCTTGGAATTGATGAAAGTTCCAAGAGTACAAAGCAAGTTAAGAGTATTCTCTTTTAAGATACAATTTGGCACTCAGGTTTCTGAGCTTAGAAGGGACTTGAATATTGTTAACTCTGCATCTGAAGAGATCAAGAATTCAGTTAAGTTGAAAAGAATTATGCAGACTATTCTTTCTCTTGGTAATGCTTTGAACCACGGAACTGCAAGAGGCGCTGCCATTGGGTTTCGATTGGATAGTCTCCTCAAGCTCACAGATACACGAGCCAGGAACAACAAAATGACTCTCATGCATTATCTTTGTAAGGTGCTTGCTGAAAAGCTTCCAGAACTTCTAGATTTCAAAGACCTGGAGAGCTTGGAGGCTTCGACCAAGATACAATTGAAATGTTTGGCAGAGGAAATGCAAGCTATTAGTAAAGGACTTGAGAAAGTAGTTCAGGAATATGAGTCAGAGAATGATGGGCCTGTGTCAGAAGATTTCTGTAAGATTTTAAAGGAATTTCTTAGTGACGCTGAAGCCAAAGTGAGGTCCTTGGCTCAACTTTATTCAAATGTGGGTAGAAACGCAGATGCATTAGCTCAATACTTCGGGGAGGATCCTGCACGTTGCCCATTTGAACAAGTTGTATCCACCCTACTCAACTTTGTGAGAATGTTTGAACGAGCCCATGAAGATAACTGCAAGCAGCTTGAATTAGAGAAAAAGAAAGCAATGAAGGAAGCGGAAAATGAGAAGTTGAAGTTAACTCCTAAAAAGAAGTCTGAACAAATGATAAGTTCCCCCATTGAGAGTGGCGATATCAAGTGA 3528 0.4311 MRLVPNIDGEGGCCPMFRIYGQDPFMAADRTPKVLFSTPKRSKVVRHYKQADCELVKIDIHCHVQGDVVLECISLDSDLEREQMMFRVMFNTAFIRSNILMLNRDEIDTLWNSKDQFLKDFRVEILFSDMDASSSVISIDMPRLEDKEGLPIEAFAKVQEIFSNVDWLDSKIEVVNVLQQITASNKLQEILDSGVSARPSNLLKDSLSGRFKFDPTTLPENGISSMTSTVPGKTKESIPSYEPSVDPNSLKRRIEPQHLQVSLQLPTQSKIISPRVRQASQSALVLCCSSLQGSPVPISRYPSAPSALGITALLQDRAEGISTKKSIMELQCPLLLLHCPLLVPPVSTSALLRSLELNSLMDVPAVTHNTSAQLQPTSEILQPIITQHPENIAPDKTRKPLVSPSTPQTQSQPTSGLMQPAVTQHPENIVHDKGEKSLVSLLQPPHQPQISSELMQPFIFQQPENTTHDKSKKSLVFPPATLPPLPEAIQSSVSTPSQPTAVPLSPSSSLKSSFSALPSPPPASPPSSSFPEISPLSAIKNSFKAPPPPPPYPTAAPLLSPSSTKSSLSTLLPPNPPPPPLSSSPLSHALVKSSFASPLLHPSLPHPAPVPLPTSSSMSFSPSPSPAPAPPSLSSFPVRSPHITSENSLKAAPPPPPPPPRGYSRTMSGPILRSTVPPPPPPPASLTTTLSKNSAIVPLVPPPPSANGLSKAGTLHPGTGNGNVPPAPGPPGVLGRLVFFGVKGCGLSRPNAKIQTQTKRSNLKPYHWLKLTRVMHGSLWAETQKPEEASKAPEFDMSELESLFSASTPNSNHGGKGGKSNRLAPGTKTEKVQLVELRRAYNCEIMLTKVKIPLPDLMSSVLALDDSALDADQVENLIKFCPTKEEMELLRNCTGDKDNLGRCEQFFLELMKVPRVQSKLRVFSFKIQFGTQVSELRRDLNIVNSASEEIKNSVKLKRIMQTILSLGNALNHGTARGAAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFXKDLESLEASTKIQLKCLAEEMQAISKGLEKVVQELXESENDGPVSEDFCKILKEFLSDAEAKVRSLAQLYSNVGRNADALAQYFGEDPARCPFEQVVSTLLNFVRMFERAHEDNCKQLELEKKKAMKEAENEKLKLTPKKKSEQMISSPIESGDIK 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1090 1177 SUPERFAMILY Formin homology 2 domain (FH2 domain) 766 1146 - -
Prci2g1090 1177 ProSiteProfiles C2 tensin-type domain profile. 1 130 IPR014020 -
Prci2g1090 1177 MobiDBLite consensus disorder prediction 801 817 - -
Prci2g1090 1177 MobiDBLite consensus disorder prediction 442 465 - -
Prci2g1090 1177 SMART it6_source 472 1173 IPR015425 -
Prci2g1090 1177 MobiDBLite consensus disorder prediction 1148 1177 - -
Prci2g1090 1177 PANTHER FORMIN-J 2 1164 - -
Prci2g1090 1177 MobiDBLite consensus disorder prediction 542 557 - -
Prci2g1090 1177 Gene3D Formin, FH2 domain 772 1167 IPR042201 -
Prci2g1090 1177 Pfam Formin Homology 2 Domain 756 1129 IPR015425 -
Prci2g1090 1177 MobiDBLite consensus disorder prediction 222 249 - -
Prci2g1090 1177 Pfam C2 domain of PTEN tumour-suppressor protein 3 128 IPR014020 -
Prci2g1090 1177 Coils Coil 1129 1158 - -
Prci2g1090 1177 SMART PTEN_C2_2 1 129 IPR014020 -
Prci2g1090 1177 MobiDBLite consensus disorder prediction 401 422 - -
Prci2g1090 1177 Gene3D - 1 133 - -
Prci2g1090 1177 Coils Coil 1039 1056 - -
Prci2g1090 1177 MobiDBLite consensus disorder prediction 782 825 - -
Prci2g1090 1177 MobiDBLite consensus disorder prediction 650 664 - -
Prci2g1090 1177 MobiDBLite consensus disorder prediction 487 517 - -
Prci2g1090 1177 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 130 IPR035892 -
Prci2g1090 1177 Coils Coil 1058 1059 - -
Prci2g1090 1177 ProSiteProfiles Formin homology-2 (FH2) domain profile. 753 1154 IPR015425 -
Prci2g1090 1177 MobiDBLite consensus disorder prediction 384 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1090 Prci-Chr2 8069436 8088873 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1090 1 318 FH2 protein (formin) Gene Family AT2G25050 56.211 6.71e-106 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1090 - - pcin:129302115 1996.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1090 2 8069436 8088873 Prci2g1090 2 8069436 8088873 ECH