Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1089 ATGGACGGAAAGGAAGAAACGCTTCAATCAGGGTTGAAACGTCTGAGAGATGAGAATAACGCTCTGAGAATGATGCTTCAAGTTCTGACCAGCAAATACCAAAAGGTCCAGTGTCAACTTCAAGAAATGAGAGACACGGACTCGAATCAAAGCGTATTAGTGTCTGATTATTACGATACGAGTAATAAGAGACCAAGAATTGAGTTACCTATAGCACATAAGCCATTGCAAATCTTCGCTAGAACCCATCCCAAGGACAATAGTATGGTAGTAAGAGATGGATATCAGTGGAGGAAGTATGGCCAGAAGGTTACAAAAGACAATCCATCGCCTCGAGCTTACTTCAGATGTTCCATGTCTCCAAACTGCCCAGTCAAAAAGAAGGTACAAAGAAGCGTAAAAGACAGGTCTATCCTTGTGGCGACTTATGAAGGAGAACACAACCATGGAACTGTTGATCCCAAAACTCCCCAAGGCTCAATTGCCGACGACAAAGAAGAGACCAAAATTAATGGTGTTGGGATTCCTAGGTGGTTTCTGACAGAAAGAAGACACACTGAAGATCTAAGCAACTTCAGAATTGATCAATTTGTGGGTTCTCTCGTTAAAGATCCCAACTTCACTGTATCGTTAGCCGAAGCAGTTGCTCGATCCATCACTACCCAACAACGCAAGCAACAAGACCTTGATCTTAATTTGAGTCTTGGTGAAGTGTAA 717 0.4254 MDGKEETLQSGLKRLRDENNALRMMLQVLTSKYQKVQCQLQEMRDTDSNQSVLVSDYYDTSNKRPRIELPIAHKPLQIFARTHPKDNSMVVRDGYQWRKYGQKVTKDNPSPRAYFRCSMSPNCPVKKKVQRSVKDRSILVATYEGEHNHGTVDPKTPQGSIADDKEETKINGVGIPRWFLTERRHTEDLSNFRIDQFVGSLVKDPNFTVSLAEAVARSITTQQRKQQDLDLNLSLGEV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1089 238 Gene3D WRKY domain 79 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g1089 238 SUPERFAMILY WRKY DNA-binding domain 87 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g1089 238 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 6 157 IPR044810 GO:0003700
Prci2g1089 238 Coils Coil 12 46 - -
Prci2g1089 238 MobiDBLite consensus disorder prediction 144 165 - -
Prci2g1089 238 Pfam WRKY DNA -binding domain 93 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1089 238 ProSiteProfiles WRKY domain profile. 86 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1089 238 SMART WRKY_cls 91 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1089 Prci-Chr2 8067741 8069313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1089 8 224 WRKY Transcription Factor Family AT2G25000 35.470 5.30e-43 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci2g1089 WRKY 5.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1089 - - gmx:100170679 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1089 2 8067741 8069313 Prci8g0040 8 297134 298863 CCT