Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1088 ATGGAACCAAGGTGCGAGAACACCTTTCTCAATCTCAACGTTAATCCTTCTCCGCATGCGGACGGTGTCCCGCCTGAGGTTTTGATGATGGAAGAGTTGCATCGTTTAAATAGCGAGAAAAAGATGCTGACCGAGAAGCTTAGTCGCGTGAATAAGAGCTACAGTGCTTTGCAGAATCATTTTAACCAAGTTCTCAAGACCACGAATTCTCAATTAGATTTAAGTGTAGTACAATCAAGGAAGAGAAAGGCTGAAAACGAGAATTGTATTGCTACTAATAATATGTTTAGTTTTAGCGGCGCTTCCGAGTGCAGCACCAGCACTGAGGATTCATTCAGGAGGCCCAAGGACCCCAGTCCGATCAGCCACCCAATTTCTCCTAAGGTTTCAAAGGTTGTTGTGCGCACGCAGGCATCTGATCCCAGCTTATATGTGAGAGATGGATATCAGTGGAGGAAATATGGTCAGAAGGTCACGAGAGATAACGCCTCTCCTAGGGCTTACTTCAGGTGTTCCTTTGCCCCGAGCTGTCCGGTGAAGAAGAAGGTGCAAAAAAGCGCGGAGGACCCGACGTTATTGGTGGCAACGTACGAAGGAGAGCACAACCATATTGTGCAGGGGGCTCAAAGTGAAGTCATGGATCCAATTCATCCCGCGAAATCGAGCACTGCGATTGCTGACCAGGATTTCATCCACCAGTTTTTGGCTCAGCAAATGGCTTCTTCTTTGGCAAGAGATCCCGATTTCACTTCAGCTCTTGCTGCTGCTATTTCAGGAAAAATTTTGGAGCGCACTGTTCCCTAG 804 0.4726 MEPRCENTFLNLNVNPSPHADGVPPEVLMMEELHRLNSEKKMLTEKLSRVNKSYSALQNHFNQVLKTTNSQLDLSVVQSRKRKAENENCIATNNMFSFSGASECSTSTEDSFRRPKDPSPISHPISPKVSKVVVRTQASDPSLYVRDGYQWRKYGQKVTRDNASPRAYFRCSFAPSCPVKKKVQKSAEDPTLLVATYEGEHNHIVQGAQSEVMDPIHPAKSSTAIADQDFIHQFLAQQMASSLARDPDFTSALAAAISGKILERTVP 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1088 267 Gene3D WRKY domain 128 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g1088 267 SUPERFAMILY WRKY DNA-binding domain 143 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g1088 267 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 28 206 IPR044810 GO:0003700
Prci2g1088 267 FunFam WRKY transcription factor 40 130 207 - -
Prci2g1088 267 MobiDBLite consensus disorder prediction 101 126 - -
Prci2g1088 267 Coils Coil 33 53 - -
Prci2g1088 267 SMART WRKY_cls 145 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1088 267 ProSiteProfiles WRKY domain profile. 147 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1088 267 Pfam WRKY DNA -binding domain 147 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1088 Prci-Chr2 8057016 8058882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1088 28 263 WRKY Transcription Factor Family AT2G25000 41.923 1.89e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci2g1088 WRKY 4.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1088 - - gmx:100127373 261.922