Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1087 ATGGAGGAGCGTCATACTCTGTTTGGACGCTATGAAATCGGAAGGCTTCTGGGGAAAGGGACGTTCGCTAAAGTCTATCATGGCAAGCGAATGTCGACGGGCGAGAGCGTTGCGATCAAAGTGATGAGCAAAAACAAAGTGCAGGGACAAGGGATGATGGAGCAGATCAAGCGCGAGGTCTCCGTCATGCGTTTGGTTCGACACCCCAACGTTGTTGAACTCCAAGAAGTCATGGCCACCAAAACTAAGATCTTCTTCGTAATGGAGTATGTTCGTGGAGGCGAGCTCTTCCACAAGGTCGCCAGAGGCAAACTCAGAGAGGATCAAGCACGAAAGTACTTCCAACAGTTGATCGGCGCCGTCGATTTTTGTCACAGCAGGGGCGTCTCTCACAGAGACCTCAAGCCTGAGAATTTATTACTCGATGACAACCTCAAAGTCTCCGACTTTGGCCTCTCGGCGTTGCCGGAACACCTCCGGTACGACGGCCTCCTCCACACCCAGTGCGGAACTCCGGCGTATGTTGCCCCTGAAGTTTTGAGAAAGAAAGGATACGACGGATCCAAAGCTGATATTTGGTCCTGCGGGGTGATTCTTTACACATTATTGGCTGGATTTCTTCCGTTTCGACATGAAAACGTCATGACGATGTACACCAAGATCTTCAAAGCTGAATTCCAGTTTCCTCCGTGGTTTTCTGCGGAATCAAGGGGATTGATTTCCAAGATTCTCGTACCAGACCCAGAAAGTCGAATCACGATTCCTGCAATAATGCGGGTCCCCTGGTTTCAAAAGGGATTTTCGATCCCATCAGCGTTTCATTCAGCGGAACTCACTTCGAACAGAGCCGTTGAAGAAGACTCCAGAACCAAGCTGCTTCCATCATCCCCTGAGTTTTTCAATGCGTTCGAGTTTATTTCTTCAATGTCTTCCGGGTTTGATTTGTCTGGGTTGTTCGAGAACAAGAGGAAGACCGGGTCAATGTTCACTTCCAAGTTCTCGGCGGCGGCGATTATGTTGAAGATGGAGACGATGGCAGAGAGGTTAAGGTTCAAGACGGCAAAGGTGAAGGGCTTCAAAATAAAGCTGGAAGGGCGGTCGGAGGGGAGGAAAGGGAGATTGCAGGTGACGGCGGAGGTGTTCGAGGTGGCGCCGGAACTCGCTGTGGTGGAGTTTTCAAAGTGTTCCGGCGACACTTTGGAATATACCAAGTTTTGCGAGGAAGATGTGAGGACGGCGCTGACAGACATTGTTTGGACGTGGCAAGGGGACAACACGTGTAACAGTAGCATCGGAGAGGGCGCGGGAAGTCAAACGATGGAGCGAGTAATATAA 1335 0.5041 MEERHTLFGRYEIGRLLGKGTFAKVYHGKRMSTGESVAIKVMSKNKVQGQGMMEQIKREVSVMRLVRHPNVVELQEVMATKTKIFFVMEYVRGGELFHKVARGKLREDQARKYFQQLIGAVDFCHSRGVSHRDLKPENLLLDDNLKVSDFGLSALPEHLRYDGLLHTQCGTPAYVAPEVLRKKGYDGSKADIWSCGVILYTLLAGFLPFRHENVMTMYTKIFKAEFQFPPWFSAESRGLISKILVPDPESRITIPAIMRVPWFQKGFSIPSAFHSAELTSNRAVEEDSRTKLLPSSPEFFNAFEFISSMSSGFDLSGLFENKRKTGSMFTSKFSAAAIMLKMETMAERLRFKTAKVKGFKIKLEGRSEGRKGRLQVTAEVFEVAPELAVVEFSKCSGDTLEYTKFCEEDVRTALTDIVWTWQGDNTCNSSIGEGAGSQTMERVI 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1087 444 Pfam Protein kinase domain 11 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1087 444 SUPERFAMILY Protein kinase-like (PK-like) 7 297 IPR011009 -
Prci2g1087 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Prci2g1087 444 FunFam Non-specific serine/threonine protein kinase 295 419 - -
Prci2g1087 444 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 409 - -
Prci2g1087 444 SMART serkin_6 11 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1087 444 Gene3D Kinase associated domain 1, KA1 300 420 - -
Prci2g1087 444 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Prci2g1087 444 Gene3D Transferase(Phosphotransferase) domain 1 2 299 - -
Prci2g1087 444 Pfam NAF domain 297 355 IPR004041 GO:0007165
Prci2g1087 444 ProSiteProfiles NAF domain profile. 295 320 IPR018451 GO:0007165
Prci2g1087 444 ProSiteProfiles Protein kinase domain profile. 11 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1087 444 CDD CIPK_C 301 414 - -
Prci2g1087 444 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Prci2g1087 444 FunFam Non-specific serine/threonine protein kinase 4 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1087 Prci-Chr2 8040822 8042457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1087 2 430 CBL-interacting serine-threonine protein kinases AT5G10930 67.045 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci2g1087 Pkinase 4.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1087 - - qsa:O6P43_015759 679.478