Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1082 ATGGCAAAGTATCACCGGAACAACGTCGGATCTCTAGTTCTCGACCATCACGATCCTGCCAGGAATACAACAGTCAGCGCTAACCACCGCATATGGAACGCCTTGTCCGCTTCAACAATACGTCGTATCATTTTTGACGCTGTCAGCTGCGGTGGTGGCTCTCGGCATCACCGCCACCACCGTAATGACTTTGCCTCCACTCCCTCGCCGATTTCATCAGACTCCGGGAACTTTAAGGACAAGTCGCAAGAACAGGGTGCTTCCAAGTCTCAGCGGAAACCAAATGCAAAGTCGGAGAAACTATCGGATCTTCTGAATATAGCGGAGCCTGAAATTGACGCCGAAACGGGGAAGAAAGAAGAGGCATTGCAGGAGCTGAAGAGAATTGTGAAGGAGTTACAGGTCGAGGATTTGACAAAGCGGCAAATGGCTGCGGCTAGTGTGAGATTGCTCGCAAAGGAAGACTTGGAAGTCAGAGGGACACTTGCAATGCTTGGAGCGATTCCTCCTCTGGTTAGAATGCTTGATTTGGAAGACGTCAATTCTCAGATCTCTTCGCTCTATGCGTTACTCAATCTTGGAATCGGCAACGACGCAAATAAAGCAGCCATTGTAAAAGTCGGTGCTATTCATAAAATGCTAAAGCTCATTGAATCACCAGCTGATCCAGATTCATTCGTTTCTGAAGCGGTTGTTGCAAATTTCCTTGGCTTGAGTGCTTTGGATTCGAATAAACCAATAATTGGATCGTCGGGTGCGATTCCTTTCCTGCTTAGAACCCTGGAAAATTCACACAAAAAAAGTAGCCCCCAGGCTAAGCAAGATGCTCTCCGAGCACTTTACAATCTGTCAATCTTCCCTGCCAACATCTCATTCATATTGGAAACAGACTCGGTTCCGTTTCTGATAAACGCAATAGGAGACATGGAAGTAAGTGAAAGAATTCTCTCAATCCTAAGCAATTTGGTATCGACCCCTGAGGGTAGAAAAGCTATAAGTGCTGTGCGCGGTGCATTCCCCATTCTGGTTGATGTATTGAATTGGACAGATTCGCCTGGATGCCAGGAAAAAGCATCTTATATTTTGATGATTATGGCACACAAAGCCTATAGTGACAGGCAGGCCATGATTGAGGCTGGGGTTGTCTCATCATTGCTTGAGTTGATGCTTCTGGGCACTGCGTTGGCACAGAAAAGGGCCTCGAGAATACTGGAACGCTTGAGAATAGACAAAGGGAAGCAGGTATCTGGGAGTTCCGGCGGAAACTTTAGTTCAACTGTATCTGCTCCCATTTGTGGCTCTTCGTCGTCTTGTACTAAGCCAGGTGAAAGTGGAAAGGAGTGTTTGGAAGAGGAGGAAGATATGATGAGTGACGAGAAGAAGGCAGTGAAGCAATTAGTCCAGCAGAGTTTGCAAAACAACATGAGGAAAATTGTGAAGAGGGCCAATTTGCCCCAAGATTTTGTTCCATCGGAGCATTTTAAGGCCCTCACTTCAGGATCGACTTCAAAAAGCCTGCCATTTTGA 1527 0.4663 MAKYHRNNVGSLVLDHHDPARNTTVSANHRIWNALSASTIRRIIFDAVSCGGGSRHHRHHRNDFASTPSPISSDSGNFKDKSQEQGASKSQRKPNAKSEKLSDLLNIAEPEIDAETGKKEEALQELKRIVKELQVEDLTKRQMAAASVRLLAKEDLEVRGTLAMLGAIPPLVRMLDLEDVNSQISSLYALLNLGIGNDANKAAIVKVGAIHKMLKLIESPADPDSFVSEAVVANFLGLSALDSNKPIIGSSGAIPFLLRTLENSHKKSSPQAKQDALRALYNLSIFPANISFILETDSVPFLINAIGDMEVSERILSILSNLVSTPEGRKAISAVRGAFPILVDVLNWTDSPGCQEKASYILMIMAHKAYSDRQAMIEAGVVSSLLELMLLGTALAQKRASRILERLRIDKGKQVSGSSGGNFSSTVSAPICGSSSSCTKPGESGKECLEEEEDMMSDEKKAVKQLVQQSLQNNMRKIVKRANLPQDFVPSEHFKALTSGSTSKSLPF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1082 508 Coils Coil 446 469 - -
Prci2g1082 508 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 24 508 - -
Prci2g1082 508 SUPERFAMILY ARM repeat 125 407 IPR016024 -
Prci2g1082 508 MobiDBLite consensus disorder prediction 51 103 - -
Prci2g1082 508 Gene3D - 111 267 IPR011989 -
Prci2g1082 508 Gene3D - 268 419 IPR011989 -
Prci2g1082 508 SMART arm_5 369 409 IPR000225 GO:0005515
Prci2g1082 508 SMART arm_5 286 324 IPR000225 GO:0005515
Prci2g1082 508 SMART arm_5 155 195 IPR000225 GO:0005515
Prci2g1082 508 SMART arm_5 197 240 IPR000225 GO:0005515
Prci2g1082 508 SMART arm_5 241 285 IPR000225 GO:0005515
Prci2g1082 508 MobiDBLite consensus disorder prediction 65 92 - -
Prci2g1082 508 Coils Coil 112 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1082 Prci-Chr2 7970296 7973595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1082 121 408 U-box Gene Family AT2G23140 33.564 1.01e-33 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1082 - - qsa:O6P43_015754 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1082 2 7970296 7973595 Prci8g0036 8 214823 216953 CCT