Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1076 ATGACTGTAGAAACCAGAAAGGATGAACCCAGAGGACAATTTCCTGTAGGAATGCGTGTTCTTGCTGTTGACGACGACCCAACTTGTCTCTTGGTGTTGGAAACTCTCCTTCGGAGATGCCAATATCACGTAACAACTACCAACCAGGCAATAACAGCTTTGACGATGTTAAGAGAAAACAAGAATAAGTTTGACCTGGTTATCAGTGATGTTCATATGCCTGACATGGACGGATTCAAGCTTCTTGAGCTTGTCGGTCTTGAAATGGACCTACCTGTCATAATGTTGTCTGCAAATGGCGACACCAAGCTGGTGATGAAGGGGATTACGCATGGTGCTTGTGATTATCTTCTGAAACCTGTTCGAATTGAGGAGCTAAAGAACATTTGGCAGCATGTAATAAGGAGGAAGAGATTTGACTCAAAGGAGAAAAACAACACTTGTAATCAAGACAAGACTCATTCTGGTGCTACCAACAACGGATTAGGTTCAGCAGGAGCTGGGAATACTGATCAAAATGGAAAGCTCACCAAGAAGAGGAAGGATCAAGATGATGAAGATGATGATGAGCATGAGCATGGTCATGACAGCGATGATCCTTCAACACAGAAGAAGCCTCGCGTTGTTTGGTCTGTTGAGCTCCACCGAAAGTTTGTTGCTGCTGTTAATCAATTAGGCATTGACAAGGCCGTGCCTAAAAAAATTCTGGATTTGATGAATGTTGAGAAACTCACAAGGGAGAACGTGGCAAGCCATCTTCAGAAATATAGGCTGTATCTGAAGAGAATTAGCTGTGTGGCGAACCAGCAGGCTAATATGGTGGCAGCCTTAGGCAGCGCTGATGCATCCTATTTGAGAGTGGGATCTCTGGGTGGGATTAAGCATCTTCAGCCATTGGGTGCTTCTGGACAGTTTCAGAACAATGTTTATCGATCCCTCCCATATAGTGGGATGATTGGAAGGCTGAATACTCCTGCTGGTCTTGGTGTTCATGGGTTGCCTTCATCAGGAATTCTTCAGATGGGTCATGCGCGGAATTTAAACAACAGCAGCTCCATGAATGATCCTCTCAAGTTCCAGCCATCCATGGCTCATGTCAATCAGAATCAGAATGGCGGTTCACTTCAGGGCATGCCAGTGTCTGTAGGTCTTGACCAATTACAACCCAATAAGGTTGTCAGTTCTGTTCAAGGTCCTGCCACTGGTTTTGATGATAAAACAATGTCTCTCATCTCAAACAAGTTGCCTGATCCAAGAGCAAGAGTAAGCTCTAGTTGCTCTGCACCTCCACTTGTGGGTATCACAACCAATTGCTTGTTGTTAGAACCAAATTCTCAAGACACGCAATGTGGGAGAGGGTATGAGAATCTTGCTTCAGTAGCCTCTCAACATTCAGAATTTTCTTTGCCTTTGATGGATGACCATAATGGTAGGTGTAGTGATAATTGGCCAAGTGCTGTGCAGTCATCTGGGATGCCCACTAATTCTTGCCCAACAAATGATTGTCATCATGGAGGGAATCCAAGTGGTGCTTCTTCCATCACTTCACTATCCACTCGGTCCCACGGTTCATTGGCAGATATGCAATCCCATGGACCCATTTTTACTAATAACAACACACCAAATGTGGCATATCAAGGGTGGGATGAGCATTCATTGGACTCTCTGATTCCTATAAATGGTGCTGTTGGTGCATCAGGGTTCCACAGAAACTTGGACTATAGTTTTGAAAATCCCTTGGAAATGAAGCACGAGGGGATCACAAAATCGGCCGAAAATCCGTCACTGAAACCAAATCAAGGATATATCATGGACCCCCATAAGGCGCAACAGAGTCGCACCTCTAATAATCTGGGTTCATTGGAGGACTTGGTCAGTGCAATGATGAAACAGGAGCAAGACTTCATATGTGATGATTTCACTGGCGGAACGTGTCTGTGA 1941 0.4467 MTVETRKDEPRGQFPVGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTNQAITALTMLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKRFDSKEKNNTCNQDKTHSGATNNGLGSAGAGNTDQNGKLTKKRKDQDDEDDDEHEHGHDSDDPSTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSADASYLRVGSLGGIKHLQPLGASGQFQNNVYRSLPYSGMIGRLNTPAGLGVHGLPSSGILQMGHARNLNNSSSMNDPLKFQPSMAHVNQNQNGGSLQGMPVSVGLDQLQPNKVVSSVQGPATGFDDKTMSLISNKLPDPRARVSSSCSAPPLVGITTNCLLLEPNSQDTQCGRGYENLASVASQHSEFSLPLMDDHNGRCSDNWPSAVQSSGMPTNSCPTNDCHHGGNPSGASSITSLSTRSHGSLADMQSHGPIFTNNNTPNVAYQGWDEHSLDSLIPINGAVGASGFHRNLDYSFENPLEMKHEGITKSAENPSLKPNQGYIMDPHKAQQSRTSNNLGSLEDLVSAMMKQEQDFICDDFTGGTCL 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1076 646 Gene3D - 17 156 - -
Prci2g1076 646 CDD REC_typeB_ARR-like 20 134 - -
Prci2g1076 646 MobiDBLite consensus disorder prediction 508 534 - -
Prci2g1076 646 PIRSF RR_ARR_type-B 1 645 IPR017053 GO:0003677|GO:0003700|GO:0009736
Prci2g1076 646 MobiDBLite consensus disorder prediction 143 205 - -
Prci2g1076 646 FunFam Two-component response regulator 201 264 - -
Prci2g1076 646 SUPERFAMILY Homeodomain-like 202 262 IPR009057 -
Prci2g1076 646 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 370 IPR045279 GO:0009736
Prci2g1076 646 Pfam Response regulator receiver domain 20 128 IPR001789 GO:0000160
Prci2g1076 646 SMART REC_2 18 130 IPR001789 GO:0000160
Prci2g1076 646 MobiDBLite consensus disorder prediction 174 203 - -
Prci2g1076 646 FunFam Two-component response regulator 18 172 - -
Prci2g1076 646 Gene3D - 201 264 - -
Prci2g1076 646 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 202 261 IPR017930 -
Prci2g1076 646 SUPERFAMILY CheY-like 17 141 IPR011006 -
Prci2g1076 646 Pfam Myb-like DNA-binding domain 207 257 IPR001005 -
Prci2g1076 646 MobiDBLite consensus disorder prediction 150 173 - -
Prci2g1076 646 NCBIfam myb-like DNA-binding domain, SHAQKYF class 205 258 IPR006447 GO:0003677
Prci2g1076 646 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1076 Prci-Chr2 7919154 7923073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1076 1 643 Response Regulator Gene Family AT2G25180 44.970 2.94e-139 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Prci2g1076 Response_reg 1.1e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1076 K14491 - gmx:100809002 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1076 2 7919154 7923073 Prci8g0031 8 154528 159185 CCT