Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1073 ATGGAAGAACCGAGGAACAACACAGGCCTACATCAACTTGTTGAAGACGAAGACAAAAAATACCAAGAAGACAAGGTCAAGAGAGAAACTTTATTTGATCTGAACGCATCTGGTCCTGATTCTGGTGTTGATAACGGCCCCGAACTCAATCTCATCACTCGTTTGGATCAGAGTCCATCAAAAGCATCATCAGAAAGCTGTGCCGATGGTGCCGATGCTGGTGTTGGTTCAGGAGCAGAACCACGATGTTTTTCATGTAATTACTGCCAGAGAAAGTTCTACAGTTCACAAGCGCTAGGGGGACACCAAAATGCGCACAAGAGAGAGCGATCAATAGCGAAAAGAGGACAGAGGCTTGGAACGCAAATACTGGCTTCAGCAGCAGCTTATGGTCATCCTTTCCTGCATAATTATGGGTATGCGAGCATGGCGTCCCTGCCTCTCTACGGTGCTGCTTGCAATAACGAGCCTCTGGGGATTCAGGCTCACTCTTTGATCCACAAGCCATGTAATAATGGGCACAGGGCTTGGGCACACCAGCCCGGGATAGGGAAGCTAGAGATGGTGAATTTTCATAAAACGACGTCGGGATTAGCTTCGAGAGGAAGTGTGGGGAGGTTTGAAATTGTGAAGACTATGATGGGTTGTGCAGAAAATGAAGAGATCAGTGGGCGTTTGGTGGGCGGGACTCACTGCTTGAAGACTAGCCCAGAAGAAACGAAGCACCTTGATTTGTCTCTCAAGCTTTAG 750 0.4787 MEEPRNNTGLHQLVEDEDKKYQEDKVKRETLFDLNASGPDSGVDNGPELNLITRLDQSPSKASSESCADGADAGVGSGAEPRCFSCNYCQRKFYSSQALGGHQNAHKRERSIAKRGQRLGTQILASAAAYGHPFLHNYGYASMASLPLYGAACNNEPLGIQAHSLIHKPCNNGHRAWAHQPGIGKLEMVNFHKTTSGLASRGSVGRFEIVKTMMGCAENEEISGRLVGGTHCLKTSPEETKHLDLSLKL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1073 249 MobiDBLite consensus disorder prediction 1 21 - -
Prci2g1073 249 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 15 249 IPR044246 GO:0009788
Prci2g1073 249 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
Prci2g1073 249 SUPERFAMILY beta-beta-alpha zinc fingers 81 111 IPR036236 -
Prci2g1073 249 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Prci2g1073 249 Gene3D Classic Zinc Finger 74 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1073 Prci-Chr2 7877631 7878755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1073 79 197 C2H2 Transcription Factor Family AT1G80730 53.788 2.36e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci2g1073 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1073 - - pcin:129303916 506.138