Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1071 ATGGGCAGGCCACAACAGAGATACCGAGGCGTCCGACAAAGGCATTGGGGCTCTTGGGTGTCTGAAATTCGCCACCCTCTATTGAAGACTAGGATTTGGCTTGGTACTTTCGAAACTGCAGAAGATGCGGCCAGAGCCTACGATGAAGCAGCGAGGCTAATGTGTGGGCCCAGAGCGAGAACCAACTTCCCGTATAACCCCAATGCGTCTCAGTCGTCTTCCAAGCTTCTCTCGGCCACTTTGACGGCGAAACTTCATAGGTGCTATGTGGCTTCTCTGCAGATGACTAGACCCTCATTACCAGAGCCTCAGAGAGTGGCTTCTTCGCCACATGTTGACGTTTCCACAAGCAGTTCTGCTGACACAGTGTTGCCACACAAGAGAGCCCAAGAAGAGCAAGAATCAGAGGCCAATTGGGTTATGAAGAAGAAGGTGAAGGTGGAAACTGCACAGCAATTCAAACCTCTTGAAGAAGATCACATTGAGCAGATGATAGAGGAATTGCTTTATTACGGTTCTGTTGAGCTCTGCTGCTCTGTGATGGACTAG 549 0.5009 MGRPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNPNASQSSSKLLSATLTAKLHRCYVASLQMTRPSLPEPQRVASSPHVDVSTSSSADTVLPHKRAQEEQESEANWVMKKKVKVETAQQFKPLEEDHIEQMIEELLYYGSVELCCSVMD 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1071 182 MobiDBLite consensus disorder prediction 100 124 - -
Prci2g1071 182 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Prci2g1071 182 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Prci2g1071 182 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Prci2g1071 182 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Prci2g1071 182 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Prci2g1071 182 MobiDBLite consensus disorder prediction 100 133 - -
Prci2g1071 182 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Prci2g1071 182 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Prci2g1071 182 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 132 - -
Prci2g1071 182 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Prci2g1071 182 FunFam Ethylene-responsive transcription factor 2 6 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1071 Prci-Chr2 7852927 7853926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1071 1 177 AP2-EREBP Transcription Factor Family AT5G25190 66.854 2.10e-77 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci2g1071 AP2 7.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1071 - - gmx:100819158 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1071 2 7852927 7853926 Prci8g0025 8 120154 121362 CCT