Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1040 ATGTTCGCCGAAGAGAATGGTCTGAAGGGAGACCCGAGGTTGCAAGCCATCTCGGAAGCCATTAGAGTCGTGCCTCACTTCCCAAAACAAGGGATCATGTTTCAAGATATAACGACATTGTTGTTGAATCACAAAGTCTTCAAAGACACCGTTGATATTTTTGTCGATCGTTACAGAGACATGGATATTTCCGCTGTTGCTGGAGTGGAAGCTCGAGGATTTATGTTTGGCCCGGCAATTGCGCTAGGCATCGGTGCAAAGTTTATTCCCTTGCGCAAACCAAGAAAGCTGCCAGGTGAAGTCATATCAGAAAAATATGTTCTTGAATATGGAACCGATTGCTTGGAGATGCATGTTGGGGCTGTACAGCCCGGGGAACGGGCCTTGGTTATTGATGATTTGGTGGCTACTGGTGGAACTCTATCAGCTGCAATAAGGCTACTAGAACGTGTTGGTGCTGAAGTGGTTGAATGTGCTTGTGTGGTCGGTGTGCCTGAGGTTAAGGGACATTGCAGGCTTAATGGAAAGCCACTATATGTTCTTGTGGAGCCACGTCAAATGGATAATGGCTTTTAA 576 0.4635 MFAEENGLKGDPRLQAISEAIRVVPHFPKQGIMFQDITTLLLNHKVFKDTVDIFVDRYRDMDISAVAGVEARGFMFGPAIALGIGAKFIPLRKPRKLPGEVISEKYVLEYGTDCLEMHVGAVQPGERALVIDDLVATGGTLSAAIRLLERVGAEVVECACVVGVPEVKGHCRLNGKPLYVLVEPRQMDNGF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1040 191 FunFam Adenine phosphoribosyltransferase 1 5 184 - -
Prci2g1040 191 CDD PRTases_typeI 51 183 IPR000836 -
Prci2g1040 191 NCBIfam adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
Prci2g1040 191 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Prci2g1040 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 185 - -
Prci2g1040 191 SUPERFAMILY PRTase-like 20 177 IPR029057 -
Prci2g1040 191 Gene3D - 6 184 IPR029057 -
Prci2g1040 191 Pfam Phosphoribosyl transferase domain 43 166 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1040 Prci-Chr2 7616443 7619528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1040 11 183 PRT Gene Family AT1G27450 69.942 9.01e-90 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1040 K00759 - cave:132190039 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1040 2 7616443 7619528 Prci15g1022 15 6342847 6345581 CCT
Prci2g1040 2 7616443 7619528 Prci2g1040 2 7616443 7619528 ECH
Prci15g1022 15 6342847 6345581 Prci2g1040 2 7616443 7619528 ECH