Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1036 ATGGCTAAAGAAGTCCCTGCTACTCCATCAACATCTTTTGATTTTGTGGTCTTGGGGGATGATCATCTGAACCTAAGAACTGTCAGAGGTGCATCCAGCCACGCAAGTCCATGGATTGAACCTGAGAGGTTGAAACTTAGGCACAGAATTGGCCGGGGACCATTCGGTGACCTTTGGTTGGCAACTCATCATCAGTCCACTGAAGATTATGACGAGCATCATGAAGTTGCTGCTAAGATGTTGTATCCAATCAAAGAGGCCAACTTGAAGATTGTATTAGAGAAATTTGACGAATTATATCATAAGTGCCAAGGAGTGGCTGCAGCTTGCGGGCTACATGGAATTTCAATTGTAAACGGAAGGATATGCATCATTATGAATTTCTACGAGGGTTCTGTTGGTGACAAAATGGCTAGGCTTAGAGAAGGAAGGATTTCATTTCATGATGCGTTGAGGTATGGAATCAATCTGGCCAAAGGTATTCTGGAACTTCATTCAAAAGGAATCCTAATTCTCAACCTTAAACCCTTTAATGTGCTTCTCGATAATAATGACCAAGCTATTTTGGGAGATTTTGGTATTCCTAGTCTTCTGCTTGGCCTCTCATTCCCAAACTCAGATATGGCTCACAGGCTGGGGACTCCAAATTACATGGCGCCAGAACAATGGCAACCTGAAGTCAGAGGCCCTATATCCTTTGAGACAGATTCGTGGGGATTTGGGTGTACCATTGTGGAAATGTTGACTAGTAATCAACCTTGGCATGGAAGATCGGTGGGTGAAATATACCAATTAGTTGTTAGAAAACATGAAAAACCTCTTATTCCTAGTGGCCTTCCTTCTTCAATTGAGAATATCCTCAGCGGATGTTTTGAGTATGATTTAAGGAATCGCCCCTCAATGATGGACATTCTGAACGTATTTAAAAGTTCTCTGGATGCATTAGCCAATGATGGAGGATGGCAATATCTTGGAACCATGACGGTTGCTGAAAAATCAAGCAGCACAGGCCATACAGATTGGTTTCTTTCAAAGGATCGTCTCCAGGTGAATGACGTGGTAAGATCTAGAAAACCAACCAATTCATGCAAACATCAAAACATGGATGTCCCGGAAGGAACTGTTGTTGGTTTAGAACGTAGTGCAGATCATGGTTTTGTTTTAGTGAGGATCCACGGTATTCATGACCCTCTAAGGATTCATATTTCAACTCTGGAGCGTGTCACATCTGGTTTGGCAGCTGGTGATTGGGTACGCTTGAAGGAAGAAGATGAGAAGCACTCACCAGTGGGCATTCTGCATTCCATTAGCCGTGATGGTAGAGTGGCTGTTGGATTTATTGGACTGGAAACTCTTTGGAGAGCTTTGAAATTGGGCTTGTCAATTGGAAAGAAAATGGCAAAGAACAAGGTGCATGCAAAAGATAGAGAAAATCAGCACGTAGATGGCCAGAATGCTAGCAACTCTGCATGGAGACCTCCTGGTGCTGTAAATGCTGGCAACACAGTATGGGTTCCTTCAGTTGCCAATATTCTTTTCAAAGAAAGTGCTAATGCACCCACTGGTCGGTAG 1572 0.4319 MAKEVPATPSTSFDFVVLGDDHLNLRTVRGASSHASPWIEPERLKLRHRIGRGPFGDLWLATHHQSTEDYDEHHEVAAKMLYPIKEANLKIVLEKFDELYHKCQGVAAACGLHGISIVNGRICIIMNFYEGSVGDKMARLREGRISFHDALRYGINLAKGILELHSKGILILNLKPFNVLLDNNDQAILGDFGIPSLLLGLSFPNSDMAHRLGTPNYMAPEQWQPEVRGPISFETDSWGFGCTIVEMLTSNQPWHGRSVGEIYQLVVRKHEKPLIPSGLPSSIENILSGCFEYDLRNRPSMMDILNVFKSSLDALANDGGWQYLGTMTVAEKSSSTGHTDWFLSKDRLQVNDVVRSRKPTNSCKHQNMDVPEGTVVGLERSADHGFVLVRIHGIHDPLRIHISTLERVTSGLAAGDWVRLKEEDEKHSPVGILHSISRDGRVAVGFIGLETLWRALKLGLSIGKKMAKNKVHAKDRENQHVDGQNASNSAWRPPGAVNAGNTVWVPSVANILFKESANAPTGR 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1036 523 CDD STKc_PknB_like 45 310 - -
Prci2g1036 523 ProSiteProfiles Protein kinase domain profile. 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1036 523 SUPERFAMILY Protein kinase-like (PK-like) 41 308 IPR011009 -
Prci2g1036 523 Gene3D Transferase(Phosphotransferase) domain 1 41 366 - -
Prci2g1036 523 Pfam Protein tyrosine and serine/threonine kinase 44 306 IPR001245 GO:0004672|GO:0006468
Prci2g1036 523 PANTHER OS06G0639500 PROTEIN 1 454 - -
Prci2g1036 523 MobiDBLite consensus disorder prediction 474 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1036 Prci-Chr2 7599743 7604080 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1036 20 310 MAP Kinase Kinase Kinase AT3G22750 23.438 2.08e-20 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Prci2g1036 PK_Tyr_Ser-Thr 2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1036 - - gsj:114393396 725.317