Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci2g1023 | ATGAAGAAAACCTGGTCATTCATCCATATCATAGGTATCCTGTGCCTGTCTAATCTCCTCTTGTCTGAAATCTCTCTGGCTGGCATTCAGAGCATCGGCACGATCACTCCTGGGTTTCAAGGCTCTCAGATGACTTGGATTGACAAAAACGGTAAGTTTCTCATATCGGACAATGGAGAATTTATGCTTGGCTTCATCCCTACACCGAACGACAACTCGTTATATCTTCTAGTAATCGTCCACGGCGACAATTCCATGGTGGTTTGGACAGCAAACAGAGACCTCCCTGTTAGTAATTCTGACAAGTTTGTGTTCGACAAAACCGGTAATGTCTTTCTACAGAAAGGAAGCGCCGTGGTTTGGTCTACAGATACCAAGGGCAAAGGTGTTTCTTCAATGGAGTTACAGGACTCAGGAAACTTGGTGTTGCTTGCTAACGATAACAGTACAATTTGGCAGAGTTTCAGCCATCCAACTGATACGTTATTGCCAAAGCAGGAATTCACAGAGGGAATGAAACTTGTCAGTAAACCTAACCCAAATAACTTGACCCACGTTCTGGAGATCAAATCTAGTGATTTAGTTCTCTCTGCTGGTTTTAAGAACCCACAGCCCTATTGGTCTCTGCAGAAAGATGACCGCAAAATCATTGATAAAGACGGTAACGCGGTGGCTTCAGCCTCCATCACTGCAAACTCATGGAAGTTCTATGATAAAAATAAATCCTTGTTATGGCAGTTCGTTTTTGCTGAAGATTCATCGGGCACAAATTCCACTTGGGCTGCCGTTCTGGGAAGTGATGGTTTCATCACTTTCGCTAATCTCAATGGTGGAAGTTCGATTAATCCCTCGCCAACAAGGATTCCCAAAGATTCTTGCAGCACACCTGAACCTTGTGATCCTTATTACATATGTTCGGATGATAACAAGTGCCGTTGCCCTTCGGCTCTGAGATCTGGTGCCAATTGCAAACCAGGTCTTGTCTCTCCTTGTGATGACTCAAAGGTATCCGCAGAACTCGTGCAAGGTGATGGTGGTCTTGGTTACTTCGCTCTTGGATTCCTTTCGCCATTCTCCAAAACTGATTTGGATGGCTGCAAATCTTCTTGTCTAGGAAATTGCTCATGTCTTGCGGTGTTCTTCCACAATAATTCAGGGAACTGTTTCCTGTTGGATAGTATAGGAAGCTTTGAGAATTCTGATGCAGACTTAGGTTTTGTTTCTTACATTAAGGTCTCGAGTAATGGAGGATCTAGCTCTTCAGGTGGCAGTGGAAGCAGCAAGAAGCACATTGTGGTGGTGGTGGTTATTATCATAACTACTTTGCTTGTCATTTTGGGGCTGCTCTATGTGGGACTTAGATGCTACAGAAGAAAACAAAAATTTGCTGAGTCTGCAAGAGGGAGTTCAGAAGAGGACAATTTCTTGGAGAATATTACTGGAATGCCTGTCCGTTTCAGCTATAAAGACATGCAAACAGCTACTAAGAACTTCTCTGAGAAACTTGGACATGGAGGTTTTGGCTCAGTTTATAAAGGAGTTCTACCAGATGGGTCTCTACTAGCTGTGAAGAAGCTGGAAAGCATAGGCCAAGGAAAGAAAGAGTTCAGGGCTGAAGTTAGCATCATTGGTAGCATTCATCATCTTCATCTGGTTAGGCTTAAAGGATTCTGTGCTGAAGGAACTCATCGCCTGCTTGCTTATGAGTTTATGGCAAATGGCTCATTAGATAAATGGATATTCAAGAAAAGTGAAAGAGAATTCATGTTGGATTGGGATACGAGGTTTAATATTGCTTTAGCCACAGCAAAAGGGCTTGCATACCTGCATGAGGACTGTGATTCAAAGATTGTTCACTGTGACATCAAACCAGAAAATGTGCTTCTTGATGAGAATTTCCTTGCCAAAGTTTCAGATTTTGGATTGGCTAAACTCATGAATCGCGAACAAAGCCTTGTTTTCACAACACTGAGGGGAACTAGGGGATATCTTGCACCAGAGTGGATCACAAACTATGCTATATCAGAGAAAAGTGATGTGTACAGCTATGGGATGGTGTTGCTAGAGATTATTGGGGGAAGGAAAAACTATGATCCTAACGAATCTTCAGACAAATCTTTCTTCCCAACCTTTGCTTTCAAGATGATGGAAGAAGGGAAGTTGAAAAATCTTCTTGATTCAAAATTGAGAATAGATGAAAATGATGAGAGGTTTCATATTGCCATCAAAGTTGCTTTGTGGTGCATACAGGAAGATATGTCTTTGAGGCCTTCCATGACCAAAGTTGTTCAGATGCTTGAGGGTCTCTCTACTGTTCCTAAGCCGCCACCATCTTCTCCCATGGGTTCTCGCCTTTACTCGTCTTTATTCAAATCTATGAGTGAAGGTGGTACCTCTTCTGGACCATCAGACTGTAATAGTGATGCATATCTTTCAGCTGTTAGGCTTTCAGGACCAAGATAA | 2463 | 0.4259 | MKKTWSFIHIIGILCLSNLLLSEISLAGIQSIGTITPGFQGSQMTWIDKNGKFLISDNGEFMLGFIPTPNDNSLYLLVIVHGDNSMVVWTANRDLPVSNSDKFVFDKTGNVFLQKGSAVVWSTDTKGKGVSSMELQDSGNLVLLANDNSTIWQSFSHPTDTLLPKQEFTEGMKLVSKPNPNNLTHVLEIKSSDLVLSAGFKNPQPYWSLQKDDRKIIDKDGNAVASASITANSWKFYDKNKSLLWQFVFAEDSSGTNSTWAAVLGSDGFITFANLNGGSSINPSPTRIPKDSCSTPEPCDPYYICSDDNKCRCPSALRSGANCKPGLVSPCDDSKVSAELVQGDGGLGYFALGFLSPFSKTDLDGCKSSCLGNCSCLAVFFHNNSGNCFLLDSIGSFENSDADLGFVSYIKVSSNGGSSSSGGSGSSKKHIVVVVVIIITTLLVILGLLYVGLRCYRRKQKFAESARGSSEEDNFLENITGMPVRFSYKDMQTATKNFSEKLGHGGFGSVYKGVLPDGSLLAVKKLESIGQGKKEFRAEVSIIGSIHHLHLVRLKGFCAEGTHRLLAYEFMANGSLDKWIFKKSEREFMLDWDTRFNIALATAKGLAYLHEDCDSKIVHCDIKPENVLLDENFLAKVSDFGLAKLMNREQSLVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPNESSDKSFFPTFAFKMMEEGKLKNLLDSKLRIDENDERFHIAIKVALWCIQEDMSLRPSMTKVVQMLEGLSTVPKPPPSSPMGSRLYSSLFKSMSEGGTSSGPSDCNSDAYLSAVRLSGPR | 820 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci2g1023 | 820 | FunFam | Serine/threonine-protein kinase | 41 | 156 | - | - | |
Prci2g1023 | 820 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 45 | 777 | - | - | |
Prci2g1023 | 820 | Gene3D | Phosphorylase Kinase; domain 1 | 459 | 570 | - | - | |
Prci2g1023 | 820 | Gene3D | Transferase(Phosphotransferase) domain 1 | 571 | 774 | - | - | |
Prci2g1023 | 820 | CDD | PAN_AP_plant | 358 | 412 | - | - | |
Prci2g1023 | 820 | ProSitePatterns | Protein kinases ATP-binding region signature. | 502 | 525 | IPR017441 | GO:0005524 | |
Prci2g1023 | 820 | ProSiteProfiles | Protein kinase domain profile. | 496 | 769 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g1023 | 820 | CDD | STKc_IRAK | 502 | 769 | - | - | |
Prci2g1023 | 820 | Pfam | Protein kinase domain | 499 | 764 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g1023 | 820 | SMART | ntp_6 | 333 | 412 | IPR003609 | - | |
Prci2g1023 | 820 | Pfam | D-mannose binding lectin | 87 | 169 | IPR001480 | - | |
Prci2g1023 | 820 | CDD | B_lectin | 47 | 158 | IPR001480 | - | |
Prci2g1023 | 820 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 87 | 176 | IPR036426 | - | |
Prci2g1023 | 820 | PIRSF | SRK | 7 | 816 | IPR024171 | GO:0004674 | |
Prci2g1023 | 820 | SMART | blect_4 | 45 | 158 | IPR001480 | - | |
Prci2g1023 | 820 | FunFam | serine/threonine-protein kinase PBS1-like | 464 | 570 | - | - | |
Prci2g1023 | 820 | SUPERFAMILY | Protein kinase-like (PK-like) | 477 | 767 | IPR011009 | - | |
Prci2g1023 | 820 | SMART | serkin_6 | 496 | 766 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g1023 | 820 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 617 | 629 | IPR008271 | GO:0004672|GO:0006468 | |
Prci2g1023 | 820 | Gene3D | - | 45 | 157 | IPR036426 | - | |
Prci2g1023 | 820 | ProSiteProfiles | Bulb-type lectin domain profile. | 39 | 156 | IPR001480 | - | |
Prci2g1023 | 820 | FunFam | S-receptor-like kinase 5 | 571 | 775 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci2g1023 | Prci-Chr2 | 7525741 | 7529605 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci2g1023 | 439 | 778 | Receptor kinase-like Gene Family | AT5G20050 | 44.444 | 5.21e-94 | 300 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Prci2g1023 | Pkinase | 7.2e-51 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci2g1023 | - | - | gmx:100791158 | 1163.29 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Prci2g1023 | 2 | 7525741 | 7529605 | Prci15g1017 | 15 | 6303726 | 6306705 | CCT |