Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1008 ATGGCAAAAGCAAACAAGTTCAGAGGAGTGAGGCAGCGCCAGTGGGGCTCCTGGGTGTCAGAAATTCGCCATCCATTACTGAAGAGACGTGTATGGCTAGGGACTTTTGAGACGGTGGAGGCAGCTGCCAGGGCGTACGACCAAGCAGCCATCTTGATGAATGGTCAAAACGCCAAGACTAATTTCCCCACGTCAATGTATCAACCCCGAGACAACACTACTTCTTCATCTCCTATGGCTCTTTCAGGCCTCCTCAGCGCGAAGCTGAAGAAGTGTTGCAAGTCTCTATCTCCCTCCCTCACTTGTCTCAGGCTTGACGCCGACATTTCTCACATTGGCGTCTGGCAGAAAGGAGCGGGTCCACATTCTGACTCTAACTGGGTCGTCAGGGTGGAGCTCGGCAATAAAGATCGGGCCAACACCGGCGAGTTCGATTCGTCAGTGAGGTCGGTGCCGGAGACTGGCGCCCAGGCAGGTAATCTGGTGGTGGATGAAGAAGACAGGGTCGCAATACAGATGATCGAAGAGCTGCTTAACTGGAACCACCCTTGCTCTTCAAGCAGCGCTTCCCAGGAACAGCAAGCTTAA 588 0.5357 MAKANKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETVEAAARAYDQAAILMNGQNAKTNFPTSMYQPRDNTTSSSPMALSGLLSAKLKKCCKSLSPSLTCLRLDADISHIGVWQKGAGPHSDSNWVVRVELGNKDRANTGEFDSSVRSVPETGAQAGNLVVDEEDRVAIQMIEELLNWNHPCSSSSASQEQQA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1008 195 Pfam AP2 domain 6 55 IPR001471 GO:0003700|GO:0006355
Prci2g1008 195 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
Prci2g1008 195 CDD AP2 6 65 IPR001471 GO:0003700|GO:0006355
Prci2g1008 195 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Prci2g1008 195 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Prci2g1008 195 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Prci2g1008 195 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Prci2g1008 195 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Prci2g1008 195 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 5 145 - -
Prci2g1008 195 FunFam Ethylene-responsive transcription factor 2 5 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1008 Prci-Chr2 7475318 7476319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1008 1 189 AP2-EREBP Transcription Factor Family AT5G25390 59.067 2.63e-72 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci2g1008 AP2 1.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1008 - - gmx:100784305 252.292