Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0997 ATGACTTTTGCGGTTTCTTCATCTGGATGCACCAAATCCATAGCCGTTCAACGTTTCTCATCCGCTCGATGCGAGCGTTTCAATGTGGGTAGCCTGACTTTGTCACGAAGACCTTTATCCTTCCCCATCCTAGTATACCCTGGTGGTCGAGACATCAGCTCTGTCAGTGTCGCTGCATCTTCTTCTCGCAAAAAGAAAAAGAAGCAAAATTTGTCTCAAAATCATGTTAAAGAGGAGTATGAGGAAGAGGATGCTTTTGAGCTTCTTTTCAAGCAACTGGAAGAAGATCTCAAAAATGATGATATGTCCTTCAACGATAGTGATGATGAAATAACTGAGGAAGACCTTGTCATGTTGGAACGGGAGTTAGAGGATGCACTGGGGGGAGATGATGCAGAATTGTTAAGCTCAGTCTTAAGTGATGCAGAAACTGATGGTGATGCTAATAATGGAGAAGAAGAAGATGATGATGATGATGATGCAGAATTGTTAAGCTCAGTCTTAAGTGATACAGAAACTGATGGTGATTCTAATAATGAAGAAGAAGATGATGATGATGATGCAGAATTGTTAAGCTCAGTCTTAAGTGATACTGAAACTGATGGTGATTCTAATAAAGAAGAAGATGATGACGACGACGATGATGATTGTGAAGGAGATGGGAGGCAAGTGAACCTTCGAAGTTGGCAGCTACGAAAATTAGCTAAAGCTTTAAAAGCTGGTCGTCGCAAAACTAGTATCAAAAGTCTTGCTGCCGAGCTCTGTCTTGATAGGGCTATTGTTCTTGATTTGCTCCGTGACCCTCCTCCAAATCTTCTAATGATGAGTCTGTCATTACCTGATGAGCCCAGAGCACCAGTACTAGAACGTGAAGCTAAACCCTCGGAGACTGTTCTTGAAGATATACGCACAGATCATGTAGAGCCTGAGGCGAAGTCTAAGGTTCCTGTTCATGTCATGCAACGTAGATGGTCTGCTCAGAAGAGATTGAAAAGGGTACACGTTGACACTCTGGAAAGAATTTATAAGAGAACAAAACGGCCCACTAATGCAATGATCAATAGCATCGTGCATGTGACCAACCTTCCTCGGAGGAGAGTTGTTAAATGGTTTGAAGATAAACGTGCAGAGGATGGCGTTCCTGAAGATCGAGTTCCGTACCGGCGTTCTGTTGCCGAAGCTCTTTGA 1188 0.4293 MTFAVSSSGCTKSIAVQRFSSARCERFNVGSLTLSRRPLSFPILVYPGGRDISSVSVAASSSRKKKKKQNLSQNHVKEEYEEEDAFELLFKQLEEDLKNDDMSFNDSDDEITEEDLVMLERELEDALGGDDAELLSSVLSDAETDGDANNGEEEDDDDDDAELLSSVLSDTETDGDSNNEEEDDDDDAELLSSVLSDTETDGDSNKEEDDDDDDDDCEGDGRQVNLRSWQLRKLAKALKAGRRKTSIKSLAAELCLDRAIVLDLLRDPPPNLLMMSLSLPDEPRAPVLEREAKPSETVLEDIRTDHVEPEAKSKVPVHVMQRRWSAQKRLKRVHVDTLERIYKRTKRPTNAMINSIVHVTNLPRRRVVKWFEDKRAEDGVPEDRVPYRRSVAEAL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0997 395 MobiDBLite consensus disorder prediction 146 160 - -
Prci2g0997 395 ProSiteProfiles 'Homeobox' domain profile. 321 381 IPR001356 GO:0003677
Prci2g0997 395 CDD homeodomain 324 376 IPR001356 GO:0003677
Prci2g0997 395 MobiDBLite consensus disorder prediction 202 219 - -
Prci2g0997 395 MobiDBLite consensus disorder prediction 141 160 - -
Prci2g0997 395 SMART HOX_1 328 385 IPR001356 GO:0003677
Prci2g0997 395 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 59 388 - -
Prci2g0997 395 MobiDBLite consensus disorder prediction 168 222 - -
Prci2g0997 395 Pfam Homeodomain 331 376 IPR001356 GO:0003677
Prci2g0997 395 SUPERFAMILY Homeodomain-like 324 382 IPR009057 -
Prci2g0997 395 Gene3D - 323 380 - -
Prci2g0997 395 MobiDBLite consensus disorder prediction 174 192 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Prci2g0997 Homeodomain 1.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0997 - - pcin:129303592 633.639