Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0990 ATGGCAAAGAAGAAGAATCCCCTAGTTTTTATGGACGTCTCTATAGATGGGGACCCCGTTGAAAGAATGGTTTTTGAGCTATTCCATGACATTGCTCCCAAGACTGCAGAAAATTTCCGTGCACTATGTACAGGAGAAAAGGGAGTCAGTACAAGTACGGGAAAGCCACTGCACTACAAGGGCTCCTTCTTTCATCGCATTGTAAAAGGTTCCATTGTGGAGGGAGGTGATTTTGTCAATCGAAACGGTACCGGTGGAGAAAGCATATATGGCTCAAATTTCCCAGATGAGTCACCTAGGCTTAAGCATGATGCACCAGGTCTCCTGTCAATGGCAATTGCTAATCGTGACACTCTTGGTTCTCATTTTATAGTCACATTGAAAGCTGATCACCATCTTGACAGGAAGCATTTGGTCTTTGGGAAACTTGTTCAAGGACTTAATATATTGAAGAAAATTGAAGATGTGGGTGATGAAGAAGGGCATCCAACTGTAACTGTTAAAATCATTAATTGTGGTGAATATAATGAAGATGGAAAGAAGATGAATAAATTGACTTCTGAAACCAATAATCATGAAGCACGGCGGAAGGGAAAGCACAAAAAATCTTCAAGAGACAGAAGGAGAAGGAGAAAAAGATACTACTCATCTGAATCAGAGAGTTCTTCGGATTCAGACATGGAATCATCAGACTCTGATAGTGATTCCGACTCGGATCTGTCATCATCATCTTACATAAGTTCTTCCAGTGATGACAGGCGGAAAAAGAGAAAAAGATCTTCTAGGAAAGACAAACATAGACGCCGAAAAAGGAGGGATAGGCGTCGTGACAAGAGGAGAAGGAGACGAGATAAAAAATCAAAGCGCAGATCTAGAAGGGATTCGGACAGTATTTCTGATTCAGATAGTGAAAGCAAAAGTGACAGCAGCTCTGATGGTGAAAGTCTTGATGTTCAAGGGAAGGAGCAAAAGCGACGAGATTATTCTGTGAAAAATGCTGAAGTTCAATCTCCTTTAGCTGGGGATAGAGAAGTACATCCCATGCATCATAAAAGGAGGGACGAAGTGGATGTGCCAGAGAATGAGGAAGCATCCCTTAAAGAAAATGGAGAACGACATAGCAATGGTATTGGAGCTGACTCTAGATCTGACAGAAGTGACGAGAGGCAGCCTGATGTGATGGATGATAATCCAGGCAAATCTAGGAATCGAAGCATGAGTCCCAAGAGGGCTATGAGCAAGAGTATGAGTATTAGTCCCAGGAGAAGTGAGAGCAAGAGCCCAAGTGCTAGTCCAGAAAGGAAGATTAGCAGAAGTCCTAGTGGTAGTAGAAGCCCTCGAGCTCCATCCAGGAGGAGTTTCAGCAGAAGCCCTGCCAGGAGCAACAGTAGAAGCCCAAGCAGAAGCATCAGCAGAAGCCCAGTGAGGGGTAGGAAAGGTAGAAGTGTCAGTAGGAGCCCTGTGAGAACTCGCTCACGTAGAAGTGTCAGTGAGAGTCCTGTCAGATCCCCATCTCATAGCCGCCGAAGCAGGAGTTCACCTAGAATATCATTACGAAGATCTGTCAGTAGAAGCCCTGTAAGGGTTTCAAGGAGGAGTATAAGCAGGAGTCCTGTTAGATCTTCTGCAAGGAGCTTGAGCAGAAGCTCAGGCAGGGTCCCCTCAAGGAGAGGTGTCAGCCGAAGTCCTGTGAGGGCTCCTAGCAGAGGGAATCGTCGCAGCTATTCTAGGAGCCCCAGTCCTGTTCGAAGGCCAAGGTCATCTCGGGGGTTATCTAGGAGCATCTCTCCTGATGTATCCCCAAAGCGTATCAGAAGGGGAAGAGGTTTTAGTGAGAGGTACTCTTATGCAAGAAGATATCGAACTCCTTCTCGATCTCCTGTGAGGTCTTATCGTTACAATGGAAGAAGCGACCGGGACAGATATTCTAGTCACAGAAGGTATTCCCCTAGGCGTCACAGAAGCCCCCCACCTCGAGGAAGAACTCCACCCAGGTACCGAAGCAGAAGAAGTAGGACTCCCTCAGTATCTCGCAGCCCTCGCTATCGTGGTCGTCGCTATAGCAGAAGCATAAGCCGAAGCCCAGTTCGGAGTCATTCCCCTGTTGAGCCATATCGATCTCGTGCTTCTCCTCGCATAGAGAAGCGCAGGTCATCTTCTCGAAGTCGAAGCCACAGCGCATCACAATCGAGGTCTTCTGTTGAATCACAGTCTCCTCAGAGGCCAAGTAAAGACAGATCAAGGTCATCCTCCCAAAGCCCAGACGGAAAGAAAGGCTTGGTCTCATATGGCGATGGTTCTCCATATTCAGACGAAAGGTGA 2322 0.4664 MAKKKNPLVFMDVSIDGDPVERMVFELFHDIAPKTAENFRALCTGEKGVSTSTGKPLHYKGSFFHRIVKGSIVEGGDFVNRNGTGGESIYGSNFPDESPRLKHDAPGLLSMAIANRDTLGSHFIVTLKADHHLDRKHLVFGKLVQGLNILKKIEDVGDEEGHPTVTVKIINCGEYNEDGKKMNKLTSETNNHEARRKGKHKKSSRDRRRRRKRYYSSESESSSDSDMESSDSDSDSDSDLSSSSYISSSSDDRRKKRKRSSRKDKHRRRKRRDRRRDKRRRRRDKKSKRRSRRDSDSISDSDSESKSDSSSDGESLDVQGKEQKRRDYSVKNAEVQSPLAGDREVHPMHHKRRDEVDVPENEEASLKENGERHSNGIGADSRSDRSDERQPDVMDDNPGKSRNRSMSPKRAMSKSMSISPRRSESKSPSASPERKISRSPSGSRSPRAPSRRSFSRSPARSNSRSPSRSISRSPVRGRKGRSVSRSPVRTRSRRSVSESPVRSPSHSRRSRSSPRISLRRSVSRSPVRVSRRSISRSPVRSSARSLSRSSGRVPSRRGVSRSPVRAPSRGNRRSYSRSPSPVRRPRSSRGLSRSISPDVSPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSDRDRYSSHRRYSPRRHRSPPPRGRTPPRYRSRRSRTPSVSRSPRYRGRRYSRSISRSPVRSHSPVEPYRSRASPRIEKRRSSSRSRSHSASQSRSSVESQSPQRPSKDRSRSSSQSPDGKKGLVSYGDGSPYSDER 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0990 773 MobiDBLite consensus disorder prediction 567 595 - -
Prci2g0990 773 MobiDBLite consensus disorder prediction 195 212 - -
Prci2g0990 773 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Prci2g0990 773 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Prci2g0990 773 MobiDBLite consensus disorder prediction 255 289 - -
Prci2g0990 773 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Prci2g0990 773 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Prci2g0990 773 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Prci2g0990 773 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Prci2g0990 773 MobiDBLite consensus disorder prediction 290 331 - -
Prci2g0990 773 Gene3D - 1 175 IPR029000 -
Prci2g0990 773 MobiDBLite consensus disorder prediction 646 676 - -
Prci2g0990 773 MobiDBLite consensus disorder prediction 343 403 - -
Prci2g0990 773 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Prci2g0990 773 MobiDBLite consensus disorder prediction 723 757 - -
Prci2g0990 773 MobiDBLite consensus disorder prediction 404 472 - -
Prci2g0990 773 MobiDBLite consensus disorder prediction 177 194 - -
Prci2g0990 773 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Prci2g0990 773 SUPERFAMILY Cyclophilin-like 4 177 IPR029000 -
Prci2g0990 773 MobiDBLite consensus disorder prediction 177 773 - -
Prci2g0990 773 MobiDBLite consensus disorder prediction 599 619 - -
Prci2g0990 773 MobiDBLite consensus disorder prediction 516 556 - -
Prci2g0990 773 MobiDBLite consensus disorder prediction 474 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0990 Prci-Chr2 7337525 7344289 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0990 25 170 U-box Gene Family AT5G67530 41.892 5.41e-22 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0990 K09566 - gmx:100785820 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0990 2 7337525 7344289 Prci2g0990 2 7337525 7344289 ECH