Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0985 ATGCCGGTGCATCAGAAAACGAAGAATCCGTTTGCCCACTCAATATTTTGCGGCAGAGGAGACGAGCAAGAGATTGAGCTTGAGCACATGTCCAGGGACGAGGGCAGCCATTACAGCCTCGTTGGTGCCCCTCTTCCTTCTCTTGGTGCCACCGCCGCCCGTACCATTCGCCGACCCAAGCTCCGATCCTGCATCATCTCCCCTTTCAACCCTCGTTACAGATGCTGGGAGACATTTCTGGTCCTTTTAGTTTTCTACACTGCATGGGTTTGCCCCTTTGAATTTGGATTCCTTGATGAATCTAAGGGTCCTCTTGCCATAACAGATAATGTTGTCAACGGCTTTTTTGCCATTGACATTGTTCTGACCTTCTTTGTTGCCTACCTCGACAAAAGTTCTTATCTCTTTATCGACAACCCGAGACTGATTGCACTCAGATACGCCAAAACCTGGTTAATCTTTGATGTCATCTCTACCATCCCTTTTGAACTTGCTCGCAAAGTACTGCCCACGCTTCTTCAGACATACGGGCTCTTTAACATGCTGCGTCTCTGGCGTCTCCGTAGAGTTAGTGCTTTGTTTGCAAGATTAGAAAAGGACAGGAATTTTAACTACATCTGGGTCCGCTGCTCGAAGCTGATATGTGTTACTATGTTTTCAGTGCATTTTGCCGCCTGCTTTTTTTATTTTCTTGCCGCAAATCATGACATAAAAACCACATGGTTTGGGCTAGTTGCCAATGGCGACCAGATGCATCTGTGGGGACACTATATAACGTCAGTATACTGGGCCTTAGTTACTCTTTCAACGGTTGGTTACGGTGATTTGCATCCTGTAAATACAAAGGAGATGACGTTTGACATTTTCTACATTTTCTACATTCTTGGACTTAACTCATATCTAATAGGAAATATGACTAATATGCTTGTCCATATCACAAGTCGAACCAGGACATATAGGCACACTGTCCAAGCTGCCACAGGTTTTGCACAACGGAACCAGTTGCCCGTCCGCTTGCAAGAGCAGATGCTTGCTCATTTGTTTATGAAGTACAGAACAGATTTAGAAGGGCTGCAGCATCAAGAGGTTATTGATTCTCTTCCCAAAGCGATTCGATCCAGCATATCACACTACCTCTTCTATTCACTTGTTGACAAAGTCTACTTATTTTATGGAGTGTCCAATGACCTACTTTTTCAACTGGTCACGGAAATGAAAGCTGAGTACTTTCCTCCAAAGGAAGATGTGATTTTACAGAATGAAGCACCGACAGACTTCTATATATTGGTCACAGGCGCAGCTGAACTCATCATCCAAAGGAATGGTATAGAACAGGTTGTTGGCGAGGCAAAGATAGGAGATGTGGTTGGAGAGATAGGGGTGTTATGTTACAGGCCACAGCTCTTTACAGTTCGAACCAAACGATTGAGCCAGCTTTTACGTCTGAACCGCACTGCATTTCTAAATCTTGCTAATGCAAATGTTGGAGATGGGACAATAATCATGAGTAATTTTCTTCAGCATTTGAAGGAATCAAGTGATCCAATGATGGACGGAGTTTTGGCAGAAACGGAGGCCATGCTTGCTCGGGGCAAAATGGATTTGCCTGTCAGTCCATGCTTTGCTGCAAACAGAGACGATGATCTGTTGTTGCATCAATTGCTGAAGGGGGGTTCAGATCCAAACGAAGCAGACAAGAATGGAAGGACATCACTGCATATTGCCGCATCCAGAGGCAACGAACATTGTGTTGTTCTGCTTCTAGAATATGGAGCTGATCCTAACAGGAAAGATTTAAATGGAAGTATCCCACTATGGGAAGCCATGTTGGGAGGGCATGAATCTGTGATAAAACTTCTCATAGACAATGGTGGAGACATATCTTGTGCGGATGTAGGGCATCTTGCATGCACTGCTGTGGAGCAAAACAACTTGGAATTGCTCAAAGAAATTGTAAGATACGGTGGGGACGTGACGCAGCCCAAAAGCAACGGGACCACAGCACTTCACACGGCAGTATGCGATGGAAACACTGATATAGTGAAGTTCCTTCTGCAACACGGAGCAGATATTGATAAGCCAGACGTTCATGGATGGACTCCTCGGGCTTTGGCAGATCATCAAGAGCATGAAGATATCGTAGAGATGTTCCGCAACATTCGGGAGGGAAAAAGACCCCTAGTTACTCCAAGGACAATGGATTACACCAACTGCCTCAGGAAGTTTCCAAGCGAACCAACGACCTGCGCTCGTAAAGACGTGACTTGGTTGGAGAATCATCCAAGGCGAAGAGCAAACCATTTTCACAATTCCTTCTTTGGGATCATGTCGGCTGCTGCTAATCGCGATCAAGCCAATGCATCACAAGATAATATTAGCGTTGAGGAGAACCTGAATGGATTCCCAGCCAGAGTAATTTTGAGTTGTCCAGAAAAAGGCGACCATAGTGGGAAGCTCGTGTTTCTGCCCAAGTCCCTTCAAGAGCTGATAGACATGGGTGTGAAAAAGTTCGACTTTTTGGCCAACAAAATCTTGACTACAGAAGGAGCTCAGATTGAGGATATAAAACTTATACGAGATGGTGATCATCTCATTCTTGCACGTGATGGAGCTCATGAGTCAATGGCAATGGCCAACGAAGGCAGGTAG 2649 0.4519 MPVHQKTKNPFAHSIFCGRGDEQEIELEHMSRDEGSHYSLVGAPLPSLGATAARTIRRPKLRSCIISPFNPRYRCWETFLVLLVFYTAWVCPFEFGFLDESKGPLAITDNVVNGFFAIDIVLTFFVAYLDKSSYLFIDNPRLIALRYAKTWLIFDVISTIPFELARKVLPTLLQTYGLFNMLRLWRLRRVSALFARLEKDRNFNYIWVRCSKLICVTMFSVHFAACFFYFLAANHDIKTTWFGLVANGDQMHLWGHYITSVYWALVTLSTVGYGDLHPVNTKEMTFDIFYIFYILGLNSYLIGNMTNMLVHITSRTRTYRHTVQAATGFAQRNQLPVRLQEQMLAHLFMKYRTDLEGLQHQEVIDSLPKAIRSSISHYLFYSLVDKVYLFYGVSNDLLFQLVTEMKAEYFPPKEDVILQNEAPTDFYILVTGAAELIIQRNGIEQVVGEAKIGDVVGEIGVLCYRPQLFTVRTKRLSQLLRLNRTAFLNLANANVGDGTIIMSNFLQHLKESSDPMMDGVLAETEAMLARGKMDLPVSPCFAANRDDDLLLHQLLKGGSDPNEADKNGRTSLHIAASRGNEHCVVLLLEYGADPNRKDLNGSIPLWEAMLGGHESVIKLLIDNGGDISCADVGHLACTAVEQNNLELLKEIVRYGGDVTQPKSNGTTALHTAVCDGNTDIVKFLLQHGADIDKPDVHGWTPRALADHQEHEDIVEMFRNIREGKRPLVTPRTMDYTNCLRKFPSEPTTCARKDVTWLENHPRRRANHFHNSFFGIMSAAANRDQANASQDNISVEENLNGFPARVILSCPEKGDHSGKLVFLPKSLQELIDMGVKKFDFLANKILTTEGAQIEDIKLIRDGDHLILARDGAHESMAMANEGR 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0985 882 Gene3D - 75 312 - -
Prci2g0985 882 FunFam Potassium channel KAT3 75 311 - -
Prci2g0985 882 SUPERFAMILY Voltage-gated potassium channels 68 310 - -
Prci2g0985 882 CDD CAP_ED 389 490 IPR000595 -
Prci2g0985 882 ProSiteProfiles KHA domain profile. 804 882 IPR021789 -
Prci2g0985 882 SUPERFAMILY Ankyrin repeat 541 719 IPR036770 -
Prci2g0985 882 PRINTS EAG/ELK/ERG potassium channel family signature 120 129 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci2g0985 882 PRINTS EAG/ELK/ERG potassium channel family signature 257 274 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci2g0985 882 PRINTS EAG/ELK/ERG potassium channel family signature 86 93 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci2g0985 882 PRINTS EAG/ELK/ERG potassium channel family signature 109 119 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci2g0985 882 Gene3D - 537 719 IPR036770 -
Prci2g0985 882 ProSiteProfiles Ankyrin repeat region circular profile. 567 598 - -
Prci2g0985 882 ProSiteProfiles Ankyrin repeat profile. 600 632 IPR002110 GO:0005515
Prci2g0985 882 Pfam Cyclic nucleotide-binding domain 409 492 IPR000595 -
Prci2g0985 882 ProSiteProfiles Ankyrin repeat region circular profile. 600 631 - -
Prci2g0985 882 PANTHER POTASSIUM CHANNEL AKT1 35 868 IPR045319 GO:0005249|GO:0006813
Prci2g0985 882 Pfam Ankyrin repeats (3 copies) 639 717 IPR002110 GO:0005515
Prci2g0985 882 Pfam Ankyrin repeats (3 copies) 542 629 IPR002110 GO:0005515
Prci2g0985 882 PRINTS Ankyrin repeat signature 680 694 IPR002110 GO:0005515
Prci2g0985 882 PRINTS Ankyrin repeat signature 568 583 IPR002110 GO:0005515
Prci2g0985 882 ProSiteProfiles Ankyrin repeat profile. 664 696 IPR002110 GO:0005515
Prci2g0985 882 SMART ANK_2a 631 660 IPR002110 GO:0005515
Prci2g0985 882 SMART ANK_2a 567 596 IPR002110 GO:0005515
Prci2g0985 882 SMART ANK_2a 600 629 IPR002110 GO:0005515
Prci2g0985 882 SMART ANK_2a 664 693 IPR002110 GO:0005515
Prci2g0985 882 ProSiteProfiles Ankyrin repeat region circular profile. 664 695 - -
Prci2g0985 882 Gene3D Jelly Rolls 354 514 IPR014710 -
Prci2g0985 882 ProSiteProfiles cAMP/cGMP binding motif profile. 389 508 IPR000595 -
Prci2g0985 882 Pfam KHA, dimerisation domain of potassium ion channel 804 866 IPR021789 -
Prci2g0985 882 SMART cnmp_10 389 506 IPR000595 -
Prci2g0985 882 SUPERFAMILY cAMP-binding domain-like 314 509 IPR018490 -
Prci2g0985 882 ProSiteProfiles Ankyrin repeat profile. 567 599 IPR002110 GO:0005515
Prci2g0985 882 FunFam Potassium channel KAT2 377 513 - -
Prci2g0985 882 Pfam Ion transport protein 74 316 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0985 Prci-Chr2 7283140 7288471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0985 21 868 Ion Channels AT4G32500 60.768 0.0 1057
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0985 K21867 - gmx:100786870 1183.32