Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0984 ATGCCGGTGCATCAGAAAACGAAGAATCCGTTTGCCCACTCAATATTTTGCGGCAGAGGAGACGAGCAAGAGATTGAGCTTGAGCACATGTCCAGGGACGAGGGCAGCCATTACAGCCTCGTTGGTGCCCCTCTTCCTTCTCTTGGTGCCACCGCCGCCCGTACCATTCGCCGACCCAAGCTCCGATCCTGCATCATCTCCCCTTTCAACCCTCGTTACAGATGCTGGGAGACATTTCTGGTCCTTTTAGTTTTCTACACTGCATGGGTTTGCCCCTTTGAATTTGGATTCCTTGATGAATCTAAGGGTCCTCTTGCCATAACAGATAATGTTGTCAACGGCTTTTTTGCCATTGACATTGTTCTGACCTTCTTTGTTGCCTACCTCGACAAAAGTTCTTATCTCTTTATCGACAACCCGAGACTGATTGCACTCAGATACGCCAAAACCTGGTTAATCTTTGATGTCATCTCTACCATCCCTTTTGAACTTGCTCGCAAAGTACTGCCCACGCTTCTTCAGACATACGGGCTCTTTAACATGCTGCGTCTCTGGCGTCTCCGTAGAGTTAGTGCTTTGTTTGCAAGATTAGAAAAGGACAGGAATTTTAACTACATCTGGGTCCGCTGCTCGAAGCTGATATGTGTTACTATGTTTTCAGTGCATTTTGCCGCCTGCTTTTTTTATTTTCTTGCCGCAAATCATGACATAAAAACCACATGGTTTGGGCTAGTTGCCAATGGCGACCAGATGCATCTGTGGGGACACTATATAACGTCAGTATACTGGGCCTTAGTTACTCTTTCAACGGTTGGTTACGGTGATTTGCATCCTGTAAATACAAAGGAGATGACGTTTGACATTTTCTACATTTTCTACATTCTTGGACTTAACTCATATCTAATAGGAAATATGACTAATATGCTTGTCCATATCACAAGTCGAACCAGGACATATAGGCACACTGTCCAAGCTGCCACAGGTTTTGCACAACGGAACCAGTTGCCCGTCCGCTTGCAAGAGCAGATGCTTGCTCATTTGTTTATGAAGTACAGAACAGATTTAGAAGGGCTGCAGCATCAAGAGGTCACGGAAATGAAAGCTGAGTACTTTCCTCCAAAGGAAGATGTGATTTTACAGAATGAAGCACCGACAGACTTCTATATATTGGTCACAGGCGCAGCTGAACTCATCATCCAAAGGAATGGTATAGAACAGGTTGTTGGCGAGGCAAAGATAGGAGATGTGGTTGGAGAGATAGGGGTGTTATGTTACAGGCCACAGCTCTTTACAGTTCGAACCAAACGATTGAGCCAGCTTTTACGTCTGAACCGCACTGCATTTCTAAATCTTGCTAATGCAAATGTTGGAGATGGGACAATAATCATGAGTAATTTTCTTCAGCATTTGAAGGAATCAAGTGATCCAATGATGGACGGAGTTTTGGCAGAAACGGAGGCCATGCTTGCTCGGGGCAAAATGGATTTGCCTGTCAGTCCATGCTTTGCTGCAAACAGAGACGATGATCTGTTGTTGCATCAATTGCTGAAGGGGGGTTCAGATCCAAACGAAGCAGACAAGAATGGAAGGACATCACTGCATATTGCCGCATCCAGAGGCAACGAACATTGTGTTGTTCTGCTTCTAGAATATGGAGCTGATCCTAACAGGAAAGATTTAAATGGAAGTATCCCACTATGGGAAGCCATGTTGGGAGGGCATGAATCTGTGATAAAACTTCTCATAGACAATGGTGGAGACATATCTTGTGCGGATGTAGGGCATCTTGCATGCACTGCTGTGGAGCAAAACAACTTGGAATTGCTCAAAGAAATTGTAAGATACGGTGGGGACGTGACGCAGCCCAAAAGCAACGGGACCACAGCACTTCACACGGCAGTATGCGATGGAAACACTGATATAGTGAAGTTCCTTCTGCAACACGGAGCAGATATTGATAAGCCAGACGTTCATGGATGGACTCCTCGGGCTTTGGCAGATCATCAAGAGCATGAAGATATCGTAGAGATGTTCCGCAACATTCGGGAGGGAAAAAGACCCCTAGTTACTCCAAGGACAATGGATTACACCAACTGCCTCAGGAAGTTTCCAAGCGAACCAACGACCTGCGCTCGTAAAGACGTGACTTGGTTGGAGAATCATCCAAGGCGAAGAGCAAACCATTTTCACAATTCCTTCTTTGGGATCATGTCGGCTGCTGCTAATCGCGATCAAGCCAATGCATCACAAGATAATATTAGCGTTGAGGAGAACCTGAATGGATTCCCAGCCAGAGTAATTTTGAGTTGTCCAGAAAAAGGCGACCATAGTGGGAAGCTCGTGTTTCTGCCCAAGTCCCTTCAAGAGCTGATAGACATGGGTGTGAAAAAGTTCGACTTTTTGGCCAACAAAATCTTGACTACAGAAGGAGCTCAGATTGAGGATATAAAACTTATACGAGATGGTGATCATCTCATTCTTGCACGTGATGGAGCTCATGAGTCAATGGCAATGGCCAACGAAGGCAGGTAG 2532 0.4554 MPVHQKTKNPFAHSIFCGRGDEQEIELEHMSRDEGSHYSLVGAPLPSLGATAARTIRRPKLRSCIISPFNPRYRCWETFLVLLVFYTAWVCPFEFGFLDESKGPLAITDNVVNGFFAIDIVLTFFVAYLDKSSYLFIDNPRLIALRYAKTWLIFDVISTIPFELARKVLPTLLQTYGLFNMLRLWRLRRVSALFARLEKDRNFNYIWVRCSKLICVTMFSVHFAACFFYFLAANHDIKTTWFGLVANGDQMHLWGHYITSVYWALVTLSTVGYGDLHPVNTKEMTFDIFYIFYILGLNSYLIGNMTNMLVHITSRTRTYRHTVQAATGFAQRNQLPVRLQEQMLAHLFMKYRTDLEGLQHQEVTEMKAEYFPPKEDVILQNEAPTDFYILVTGAAELIIQRNGIEQVVGEAKIGDVVGEIGVLCYRPQLFTVRTKRLSQLLRLNRTAFLNLANANVGDGTIIMSNFLQHLKESSDPMMDGVLAETEAMLARGKMDLPVSPCFAANRDDDLLLHQLLKGGSDPNEADKNGRTSLHIAASRGNEHCVVLLLEYGADPNRKDLNGSIPLWEAMLGGHESVIKLLIDNGGDISCADVGHLACTAVEQNNLELLKEIVRYGGDVTQPKSNGTTALHTAVCDGNTDIVKFLLQHGADIDKPDVHGWTPRALADHQEHEDIVEMFRNIREGKRPLVTPRTMDYTNCLRKFPSEPTTCARKDVTWLENHPRRRANHFHNSFFGIMSAAANRDQANASQDNISVEENLNGFPARVILSCPEKGDHSGKLVFLPKSLQELIDMGVKKFDFLANKILTTEGAQIEDIKLIRDGDHLILARDGAHESMAMANEGR 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0984 843 ProSiteProfiles cAMP/cGMP binding motif profile. 363 469 IPR000595 -
Prci2g0984 843 Pfam KHA, dimerisation domain of potassium ion channel 765 827 IPR021789 -
Prci2g0984 843 Gene3D - 498 680 IPR036770 -
Prci2g0984 843 ProSiteProfiles Ankyrin repeat region circular profile. 625 656 - -
Prci2g0984 843 SMART ANK_2a 625 654 IPR002110 GO:0005515
Prci2g0984 843 SMART ANK_2a 528 557 IPR002110 GO:0005515
Prci2g0984 843 SMART ANK_2a 592 621 IPR002110 GO:0005515
Prci2g0984 843 SMART ANK_2a 561 590 IPR002110 GO:0005515
Prci2g0984 843 FunFam Potassium channel KAT3 75 311 - -
Prci2g0984 843 SUPERFAMILY Voltage-gated potassium channels 68 310 - -
Prci2g0984 843 Pfam Ankyrin repeats (3 copies) 503 590 IPR002110 GO:0005515
Prci2g0984 843 Pfam Ankyrin repeats (3 copies) 600 678 IPR002110 GO:0005515
Prci2g0984 843 ProSiteProfiles Ankyrin repeat profile. 528 560 IPR002110 GO:0005515
Prci2g0984 843 FunFam Potassium channel KAT2 347 474 - -
Prci2g0984 843 SMART cnmp_10 351 467 IPR000595 -
Prci2g0984 843 CDD CAP_ED 366 451 IPR000595 -
Prci2g0984 843 PANTHER POTASSIUM CHANNEL AKT1 35 363 IPR045319 GO:0005249|GO:0006813
Prci2g0984 843 PRINTS Ankyrin repeat signature 641 655 IPR002110 GO:0005515
Prci2g0984 843 PRINTS Ankyrin repeat signature 529 544 IPR002110 GO:0005515
Prci2g0984 843 ProSiteProfiles KHA domain profile. 765 843 IPR021789 -
Prci2g0984 843 ProSiteProfiles Ankyrin repeat region circular profile. 561 592 - -
Prci2g0984 843 ProSiteProfiles Ankyrin repeat profile. 625 657 IPR002110 GO:0005515
Prci2g0984 843 Gene3D Jelly Rolls 355 482 IPR014710 -
Prci2g0984 843 Pfam Cyclic nucleotide-binding domain 370 453 IPR000595 -
Prci2g0984 843 SUPERFAMILY Ankyrin repeat 502 680 IPR036770 -
Prci2g0984 843 Gene3D - 75 312 - -
Prci2g0984 843 ProSiteProfiles Ankyrin repeat region circular profile. 528 559 - -
Prci2g0984 843 SUPERFAMILY cAMP-binding domain-like 314 470 IPR018490 -
Prci2g0984 843 Pfam Ion transport protein 74 316 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci2g0984 843 PRINTS EAG/ELK/ERG potassium channel family signature 86 93 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci2g0984 843 PRINTS EAG/ELK/ERG potassium channel family signature 120 129 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci2g0984 843 PRINTS EAG/ELK/ERG potassium channel family signature 109 119 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci2g0984 843 PRINTS EAG/ELK/ERG potassium channel family signature 257 274 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci2g0984 843 ProSiteProfiles Ankyrin repeat profile. 561 593 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0984 Prci-Chr2 7283140 7288471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0984 21 829 Ion Channels AT4G32500 56.927 0.0 967
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0984 K21867 - gmx:100802964 1098.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0984 2 7283140 7288471 Prci2g0984 2 7283140 7288471 ECH