Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0976 ATGGAGGAAAATGAACAGAATAAAAGTAGTGGATTCAGGAGTTCCGGCGAGAGTCGTCCGCCGAATCCATTCGCTGCCGAATACCGACAATGCCTTAGCACCGAACGTGGGGCGGCACCAAGTAAGAAGTCCCTTGTTCGGCATCCTTCTCTTATGAAGACAAAGGTGTCTGAAATATCTGCTGAGCCAGAACCTGTTGTTGGAGATTGCAAGTCTGTGTTCCTACCAAATGTTCGCTCTGGAGGATGTGCTGATATTGGGTTCCGTTCAAGCATGGAAGACGTGTATTTGTGCGTAGACAACTTTTTGCCAAATTATGGACTCAGGAACCACATAGATGGGCCCAGTGCATTTTATGGGTTGTTTGATGGACATGGCGGAAAGCATGCTGCTGATTTTGCTTGTCATCATTTGCCAAAGTTCATTGTCGAGGATGAAGGCTTCCCAAGTGATATTGAAAGGATTATTGCATCAGCATTTTTGCAGACAGACAATGCCTTTGCTGAAGCTTGCTCTCTTGATGCTGACCTTGCTTCTGGTACCACTGCTCTGGCTGCTGTTGTCATTGGAAGGATGTTGGTGGTGGCAAATGCTGGAGATTGTCGAGCAGTGCTGTGTCGCCGTGGAAAGGCTATTGAGATGTCAAGGGATCACAAACCGACACACAGCAAAGAGAGGAAGCGCATTGAGGCATCTGGAGGTCATGTGTCTGATGGATATCTCAACGGACAGCTCAATGTAGCCCGCGCTCTAGGTGATTGGCACATGGAAGGATTGAAAGTCAGAGATGGTGGACCTCTTAGTGCAGAGCCTGAACTTATGACCACAAATCTGACAGAAGAGGATGAATTTCTCATCATGGGCTGTGATGGGATTTGGGATGTTTTTAGGAGCCAAAATGCTGTGGATTTTGCTAGGCGAAGGCTTCAGGAGCATAATGATCCAGCCAGGTGCAGTAAGGATTTGGTTGATGAAGCTTTGAAGAGAAAGAGCGGAGACAACCTAGCGGTGGTTGTGGTTTGCTTCCAGCAGCAGCCTCCGCCTAACTTGGTGGCACCGCGCTCTAGAGTGCACAGGAGCTTCTCTGCTGAAGGCTTGAGGGAGTTGCAAAGCATCCTGGATAGCTTGGGCAATTGA 1137 0.4846 MEENEQNKSSGFRSSGESRPPNPFAAEYRQCLSTERGAAPSKKSLVRHPSLMKTKVSEISAEPEPVVGDCKSVFLPNVRSGGCADIGFRSSMEDVYLCVDNFLPNYGLRNHIDGPSAFYGLFDGHGGKHAADFACHHLPKFIVEDEGFPSDIERIIASAFLQTDNAFAEACSLDADLASGTTALAAVVIGRMLVVANAGDCRAVLCRRGKAIEMSRDHKPTHSKERKRIEASGGHVSDGYLNGQLNVARALGDWHMEGLKVRDGGPLSAEPELMTTNLTEEDEFLIMGCDGIWDVFRSQNAVDFARRRLQEHNDPARCSKDLVDEALKRKSGDNLAVVVVCFQQQPPPNLVAPRSRVHRSFSAEGLRELQSILDSLGN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0976 378 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Prci2g0976 378 CDD PP2Cc 78 342 IPR001932 -
Prci2g0976 378 FunFam Probable protein phosphatase 2C 22 64 345 - -
Prci2g0976 378 PANTHER PROTEIN PHOSPHATASE 2C 47 340 IPR015655 GO:0004722|GO:0006470
Prci2g0976 378 SMART PP2C_4 69 340 IPR001932 -
Prci2g0976 378 MobiDBLite consensus disorder prediction 1 27 - -
Prci2g0976 378 Pfam Protein phosphatase 2C 81 334 IPR001932 -
Prci2g0976 378 ProSiteProfiles PPM-type phosphatase domain profile. 79 342 IPR001932 -
Prci2g0976 378 SUPERFAMILY PP2C-like 73 344 IPR036457 -
Prci2g0976 378 Gene3D - 68 346 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0976 Prci-Chr2 7230051 7233505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0976 14 378 PP2C-type Phosphatase Gene Family AT2G25620 70.899 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Prci2g0976 PP2C 5.6e-72 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0976 K14803 - gmx:100815725 606.675