Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0968 ATGGCCATGCTGAGAATGGCACAGCATAACAATGGCAATCACAGTTCGAGCCAACAGTCAGTAAAAGCAGTCTTTCATGACTTTATGGGCATGAAGCCCACTGATTCTCCCATCGTTGCGGCCCCTAAAACCGCTGGTGCGAATCCGTCGGAGGCGTCGCCATCGTCGGTATCGGTCTCTGTTGGCGCCTCTTCCGGTGGTGCTCGTGGTCCCCTATCAACCACCTCCGATATCGCTTCCGAAAGACAGTTAGGAAATCACCTCGAGGGAGTCCCATTCTATTGCCCGAGGAGCGATCTTTCTGGCACTGAGATTAGTAACAGAATAGTAGGAAACAAGAGAAGTAATTCTGATTCCAGTTTTATGAGTTCCTCCAGAGATGCCTTCCAAATGGTTCCTGACTCTCTTCAAAATTTGCATTTGATGAAGTCAAGGAAGCCAACTGTTGCTTCTCACATATATCAGCCTTCCATGGGCAGCAAGACTGATGTCAATAAATGGGACCGATCTATTCTCATGAATACTGGCTCTTCCATGCAACATCCCCCACATGGGGGTCAATTAGCATCTTTTGTGCACCAGATACCTTCTAACAAGAGCAGGGATGCTAATACTGGTCCTTCGTTTATTTCTCAATCTGCTGCTGATGAGGGATCTAGGACAGGAATGAAGAGCCCTGGGATCTTGAGCTCTATGAACACCACCACTGCTGCTTACGAGAAAACTCTGTCTGCACCTGGCAGAAGCAGGTCAAAGCCAGTGACTGGTTTAATAGACCCAGAATCTTCCATGCCTCCAAGTCAACAAGGGTTAGCATCTGCCAGCTGCCAGATGACTATTTTTTATGGAGGTCAAGCTCACGTTTTTGATAATGTACACCCCAATAAGGCAGAAATTATAATGGCTTTAGCTGGGTCAAATGGGGGATGTTGGTCCACAACATACTCCCCAAAACCTGCTGTGAAGCTCACTAATGACAGTAACAGGTTGTGTGGGGATAGTGAAACTGGTACAGTGAGTAAGATCACACCCCCACAGGAGCCTCATGGCAGAATATCTTTCGCGGGTGCTTCTAGTCTTGCCATCAAATCTGGCGATCGATTGTCTACTCAAGCAGGGGCACGTCAGGGAAGCGTTGCAGCCAATGAAGATGTCAGGAATTCAGTTAAAGCAGCAGATCCCCGTTGTGAGGACAAAAGGACGCAATCACATTGA 1215 0.4782 MAMLRMAQHNNGNHSSSQQSVKAVFHDFMGMKPTDSPIVAAPKTAGANPSEASPSSVSVSVGASSGGARGPLSTTSDIASERQLGNHLEGVPFYCPRSDLSGTEISNRIVGNKRSNSDSSFMSSSRDAFQMVPDSLQNLHLMKSRKPTVASHIYQPSMGSKTDVNKWDRSILMNTGSSMQHPPHGGQLASFVHQIPSNKSRDANTGPSFISQSAADEGSRTGMKSPGILSSMNTTTAAYEKTLSAPGRSRSKPVTGLIDPESSMPPSQQGLASASCQMTIFYGGQAHVFDNVHPNKAEIIMALAGSNGGCWSTTYSPKPAVKLTNDSNRLCGDSETGTVSKITPPQEPHGRISFAGASSLAIKSGDRLSTQAGARQGSVAANEDVRNSVKAADPRCEDKRTQSH 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0968 404 ProSiteProfiles Tify domain profile. 271 306 IPR010399 -
Prci2g0968 404 MobiDBLite consensus disorder prediction 36 75 - -
Prci2g0968 404 Pfam tify domain 273 305 IPR010399 -
Prci2g0968 404 MobiDBLite consensus disorder prediction 366 383 - -
Prci2g0968 404 MobiDBLite consensus disorder prediction 366 404 - -
Prci2g0968 404 SMART tify_2 271 306 IPR010399 -
Prci2g0968 404 MobiDBLite consensus disorder prediction 198 230 - -
Prci2g0968 404 MobiDBLite consensus disorder prediction 48 75 - -
Prci2g0968 404 MobiDBLite consensus disorder prediction 388 404 - -
Prci2g0968 404 MobiDBLite consensus disorder prediction 242 270 - -
Prci2g0968 404 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 101 344 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0968 Prci-Chr2 7128947 7135116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0968 6 351 Tify Gene Family AT4G32570 40.108 1.87e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Prci2g0968 tify 4.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0968 - - qsa:O6P43_019399 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0968 2 7128947 7135116 Prci15g0960 15 6058120 6062819 CCT