Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0967 ATGGCCATGCTGAGAATGGCACAGCATAACAATGGCAATCACAGTTCGAGCCAACAGTCAGTAAAAGCAGTCTTTCATGACTTTATGGGCATGAAGCCCACTGATTCTCCCATCGTTGCGGCCCCTAAAACCGCTGGTGCGAATCCGTCGGAGGCGTCGCCATCGTCGGTATCGGTCTCTGTTGGCGCCTCTTCCGGTGGTGCTCGTGGTCCCCTATCAACCACCTCCGATATCGCTTCCGAAAGACAGTTAGGAAATCACCTCGAGGGAGTCCCATTCTATTGCCCGAGGAGCGATCTTTCTGGCACTGAGATTAGTAACAGAATAGTAGGAAACAAGAGAAGTAATTCTGATTCCAGTTTTATGAGTTCCTCCAGAGATGCCTTCCAAATGGTTCCTGACTCTCTTCAAAATTTGCATTTGATGAAGATCCTCCGGAATGCAGCTGGAGGAGAGCAGCTTAGAAGGTCTAATGATGATTATGTGTTTCTTGGTATGCAGTCAAGGAAGCCAACTGTTGCTTCTCACATATATCAGCCTTCCATGGGCAGCAAGACTGATGTCAATAAATGGGACCGATCTATTCTCATGAATACTGGCTCTTCCATGCAACATCCCCCACATGGGGGTCAATTAGCATCTTTTGTGCACCAGATACCTTCTAACAAGAGCAGGGATGCTAATACTGGTCCTTCGTTTATTTCTCAATCTGCTGCTGATGAGGGATCTAGGACAGGAATGAAGAGCCCTGGGATCTTGAGCTCTATGAACACCACCACTGCTGCTTACGAGAAAACTCTGTCTGCACCTGGCAGAAGCAGGTCAAAGCCAGTGACTGGTTTAATAGACCCAGAATCTTCCATGCCTCCAAGTCAACAAGGGTTAGCATCTGCCAGCTGCCAGATGACTATTTTTTATGGAGGTCAAGCTCACGTTTTTGATAATGTACACCCCAATAAGGCAGAAATTATAATGGCTTTAGCTGGGTCAAATGGGGGATGTTGGTCCACAACATACTCCCCAAAACCTGCTGTGAAGCTCACTAATGACAGTAACAGGTTGTGTGGGGATAGTGAAACTGGTACAGTGAGTAAGATCACACCCCCACAGGAGCCTCATGGCAGAATATCTTTCGCGGGTGCTTCTAGTCTTGCCATCAAATCTGGCGATCGATTGTCTACTCAAGCAGGGGCACGTCAGGGAAGCGTTGCAGCCAATGAAGATGTCAGGAATTCAGTTAAAGCAGCAGATCCCCGTTGTGAGGACAAAAGGACGCAATCACATTGA 1287 0.4771 MAMLRMAQHNNGNHSSSQQSVKAVFHDFMGMKPTDSPIVAAPKTAGANPSEASPSSVSVSVGASSGGARGPLSTTSDIASERQLGNHLEGVPFYCPRSDLSGTEISNRIVGNKRSNSDSSFMSSSRDAFQMVPDSLQNLHLMKILRNAAGGEQLRRSNDDYVFLGMQSRKPTVASHIYQPSMGSKTDVNKWDRSILMNTGSSMQHPPHGGQLASFVHQIPSNKSRDANTGPSFISQSAADEGSRTGMKSPGILSSMNTTTAAYEKTLSAPGRSRSKPVTGLIDPESSMPPSQQGLASASCQMTIFYGGQAHVFDNVHPNKAEIIMALAGSNGGCWSTTYSPKPAVKLTNDSNRLCGDSETGTVSKITPPQEPHGRISFAGASSLAIKSGDRLSTQAGARQGSVAANEDVRNSVKAADPRCEDKRTQSH 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0967 428 MobiDBLite consensus disorder prediction 36 75 - -
Prci2g0967 428 SMART tify_2 295 330 IPR010399 -
Prci2g0967 428 ProSiteProfiles Tify domain profile. 295 330 IPR010399 -
Prci2g0967 428 MobiDBLite consensus disorder prediction 222 254 - -
Prci2g0967 428 Pfam tify domain 297 329 IPR010399 -
Prci2g0967 428 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 101 368 IPR040390 -
Prci2g0967 428 MobiDBLite consensus disorder prediction 48 75 - -
Prci2g0967 428 MobiDBLite consensus disorder prediction 390 428 - -
Prci2g0967 428 MobiDBLite consensus disorder prediction 390 407 - -
Prci2g0967 428 MobiDBLite consensus disorder prediction 412 428 - -
Prci2g0967 428 MobiDBLite consensus disorder prediction 266 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0967 Prci-Chr2 7128945 7135116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0967 6 375 Tify Gene Family AT4G32570 39.186 1.32e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Prci2g0967 tify 4.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0967 - - qsa:O6P43_019399 496.123