Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0959 ATGAAAGTTGCTTATTTTGCTGCATCCCTGTTTCCAAGTATACAAATAAAATACCACACAGTTGAGATACCTGAGGCACTGGAGTATTATTCATTTTGGCACCACTCAGGAGCTGTATCTAAAGGTCCATCCTACACTTGTCTATTGTTGATGGAGCAGACAGGGCACTTGAACTGTAGTCAGCACGTCATTGACATCCCTGGGAGCATTGATTCTTCACCATCTACTTCACCTCATGATAGATATTTTAGTAGCATAGACACATCCGAGCATGGAGAAGGCCCCACAAGTGCAGGATTCCCTGTTTCTCAGCAATCAGTTCCTCTCTCTAGTGTATCCAATGGATCAAATTCCAGGAATTCTTCATCAATGAGGCAGGAGGAAACCCGTCGACTCAGGAACCCATTGAATTCTGGCTTTTGGATATCAATTGAGCTATTCCTCACTGTAAGCCAGATTGTCGCATCTATTATTGTTTTATCTTTGTCAAGGCATGAGCATCCAAGCACTCCACTGTTTGCATGGATCATTGGTTATGCCAGTGGTTATGTTGTTCTCCTTCCTCTACTCTATTGGCGGTATTATCATGGCAACCAGATTCAAGAGCAAGATTCATCTCATCTGGGTGAGACTTCTCAGATGAATGTTTCTTCAAGGACCTACCACTCTGTTGCTAGAACCAGTGGACAAGAGGATGATCAGGCTACTGCTGCATCATCCATAAGCAATCAAGGTTCAAGTTTGATGAATACAAGACTGAAGAAACTAATGGAGTACTTCAAAATGGCCTTGGATTGCTATTTTGCCGTGTGGTTTGTTGTTGGCATTGTATGGATCTATGGGGCACAATCGTCTGCTGATGAAGCTCCTAACTTGTATAGGTTAACTATAGTGTTTCTCATCTTCAGCTGTATCGGTTATGCTATGCCCTTCCTTGTATGTGCGACAATATGTTGTTGTCTACCTTGTATAATTTCCATAGTTGGTTTTAGAGAAGATCAGATACAAACCAGAGGGGCAACCACCGAATCCATTAATGCGTTGCCAACGTACAAGTTTAAAATGAAAAGTAAAATCAATTCTACTAACTCTGCTATTAGTGAAGGTGGAATTGTGGCTGCAGGAACTGAAAAGGAGCGTCTCATCTCTGGAGAGGATGCGGCTTGCTGCATCTGCTTGACAATGTATGAAGACAACGATGAGTTGAGAGAATTGGCTTGTTCTCATCTTTTTCACAAAGACTGTGTGGACAAGTGGTTGAAGATAAATGCGTTATGCCCTCTTTGCAAGGGTGAGGTCGGTGAGGTCGAGGATGCAAGAGGATCATCAGGCTTCGTAGAAGATGCAGGCCAGCGAGTTGAAAATATATAG 1371 0.4274 MKVAYFAASLFPSIQIKYHTVEIPEALEYYSFWHHSGAVSKGPSYTCLLLMEQTGHLNCSQHVIDIPGSIDSSPSTSPHDRYFSSIDTSEHGEGPTSAGFPVSQQSVPLSSVSNGSNSRNSSSMRQEETRRLRNPLNSGFWISIELFLTVSQIVASIIVLSLSRHEHPSTPLFAWIIGYASGYVVLLPLLYWRYYHGNQIQEQDSSHLGETSQMNVSSRTYHSVARTSGQEDDQATAASSISNQGSSLMNTRLKKLMEYFKMALDCYFAVWFVVGIVWIYGAQSSADEAPNLYRLTIVFLIFSCIGYAMPFLVCATICCCLPCIISIVGFREDQIQTRGATTESINALPTYKFKMKSKINSTNSAISEGGIVAAGTEKERLISGEDAACCICLTMYEDNDELRELACSHLFHKDCVDKWLKINALCPLCKGEVGEVEDARGSSGFVEDAGQRVENI 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0959 456 Pfam Ring finger domain 388 430 IPR001841 -
Prci2g0959 456 SUPERFAMILY RING/U-box 380 436 - -
Prci2g0959 456 MobiDBLite consensus disorder prediction 69 83 - -
Prci2g0959 456 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 51 433 - -
Prci2g0959 456 SMART ring_2 389 429 IPR001841 -
Prci2g0959 456 MobiDBLite consensus disorder prediction 69 129 - -
Prci2g0959 456 MobiDBLite consensus disorder prediction 98 123 - -
Prci2g0959 456 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 373 445 IPR013083 -
Prci2g0959 456 ProSiteProfiles Zinc finger RING-type profile. 389 430 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0959 Prci-Chr2 7092590 7101628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0959 119 439 C3H Transcription Factor Family AT1G80400 57.231 2.41e-137 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0959 - - pcin:129302441 879.782