Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0951 ATGCCAGTCAAATCGGCGCAATCATCGTTTCGGGATCGGACACAGGAATTCCAGAGCATAGCTGAGAGGCTAAAGAAGTCAGTCTCGTCCAGTTCAGGGCCAAACGGGCCCAGCAGTAGTTCAAGATCGGAGGAACAGCGATCTGCAGTTGCAATTCAGTCAGAATTCAATCGGAGGGCTTCCAAGATTGGTTATGGGATACATCAGACGTCACAGAAACTTGCTAAGCTGGCCAAGTTGGCAAAAAGGACTTCGGTTTTTGATGACCCCACCATGGAAATCCAAGAGCTCACAGCAGTTATTAAGCAAGATATCACTGCACTGAACTCTGCTGTTGTAGAACTGCAGCTAATCAGCAACGCTAGAAATGATAGTGGAAATATCTCTAGTGACACAACTAGTCACTCAACCACAGTTGTTGATGACCTTAAAACACGATTGATGAGCACCACAAAAGAGTTTAAAGAAGTCCTCACCATGCGAACAGAGAACTTGAAGGTACATGAGAATAGAAGACAGTTGTTTTCTTCCACTGGTTCTAAGGAAGCTGCGAATCCTTTTGTTCGTCAACGTCCCTTGGCTGCAAAGTCCGTTGCCAATGCCCCTGCACCCCCATGGGCTAGTGGGTCAACATCTTCATCTCAGTTGTTTCCAAAGAAACAAGTGGATGGGGAGAGTCAACCATTACTGCAGCAGCAGCAGCAGCAATTGGTTCCATTGCAGGATTCATATATGCAAAGCAGAGCTGAAGCTCTTCAGAATGTTGAGTCCACTATTCATGAGTTGAGCAGCATTTTTAATCAATTAGCAACACTTGTTTCCCAACAAGGGGAAATTGCCATCAGGATTGATGAGAACATGGACGCGTTGGCAAATGTAGAAGGGGCACAGGGGGCTTTGCTAAAATATCTGAACAACATATCTTCTAATAGGTGGCTGATGATCAAGATATTCTTTGTATTAGTATTTTTCCTTATGGTTTTCCTATTTTTTGTGGCATAG 1002 0.4441 MPVKSAQSSFRDRTQEFQSIAERLKKSVSSSSGPNGPSSSSRSEEQRSAVAIQSEFNRRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTAVIKQDITALNSAVVELQLISNARNDSGNISSDTTSHSTTVVDDLKTRLMSTTKEFKEVLTMRTENLKVHENRRQLFSSTGSKEAANPFVRQRPLAAKSVANAPAPPWASGSTSSSQLFPKKQVDGESQPLLQQQQQQLVPLQDSYMQSRAEALQNVESTIHELSSIFNQLATLVSQQGEIAIRIDENMDDXLANVEGAQGALLKYLNNISSNRWLMIKIFFVLVFFLMVFLFFVA 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0951 334 CDD SNARE_syntaxin5 245 318 - -
Prci2g0951 334 MobiDBLite consensus disorder prediction 21 52 - -
Prci2g0951 334 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 7 26 IPR021538 -
Prci2g0951 334 FunFam Syntaxin-32 like 50 297 - -
Prci2g0951 334 Gene3D - 49 297 - -
Prci2g0951 334 MobiDBLite consensus disorder prediction 195 225 - -
Prci2g0951 334 PANTHER SYNTAXIN 52 324 IPR045242 -
Prci2g0951 334 Pfam SNARE domain 278 330 IPR000727 -
Prci2g0951 334 MobiDBLite consensus disorder prediction 204 225 - -
Prci2g0951 334 SMART tSNARE_6 237 304 IPR000727 -
Prci2g0951 334 SUPERFAMILY t-snare proteins 54 297 IPR010989 GO:0016020|GO:0016192
Prci2g0951 334 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 242 304 IPR000727 -
Prci2g0951 334 ProSitePatterns Syntaxin / epimorphin family signature. 248 287 IPR006012 GO:0005484|GO:0006886|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0951 Prci-Chr2 7008694 7013559 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0951 1 334 SNARE and Associated Proteins AT3G24350 63.989 4.78e-148 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0951 K08490 - gmx:100811494 476.863