Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0942 ATGAATCAAAATAAGGCACCATTACCATTGCCAGTTAGAAGTCGTTCAAGTGATGAAATCAGAAACTTGGCCTTGGCCTCATTTTCAAGCAACCTCTTACCAGCATTTGGCGCCAACATTGCTGATGACGGTCACCTAAACATTAGAAAATATGTCATCACTCCCTTTGATCATAGATATCGGCTGTGGCAGACATTCCTTGTTGCTTTGGTCGTATACTCTGCATGGGCATCTCCATTCGAGCTGGCTTTCACAGACGTGGCAGTTGGGTCGTTGTGGCCCGTTGATCTACTCGCCGATGCCTTCTTTGCCATTGATATAGTCCTAACTTTCTTTGTGGCTTATTTGGACACATCAACCTATCTCCTCGTTGATGACCACAAGAAGATAGCCTTCAGGTACTTGAGAAAGTTAGATTTTCCCATGGACGTGGCGGCAACTTTGCCGTTTCTGCAGATATACCAAATTCTGATGGGTAAAACGTACGGAGAGGTCTTGGGTTTCATGAATATGCTCAGGCTTTGGCGATTAAGGCGTGTTGCCAGGATTTTCTGCAGGCTAGAGAAAGACATTCGAATTAGCTACTCGGCCACAAGATTTTGTAAACTTATATGTGTTACGCTATTTGCAGTCCATGTCGCAGGCTGCATGTATTATTGGTTGGCTGCCCTAGACACAAACCCTGGGAACACATGGATTGGGAAGCCGACACAAGATTTTGAACACATGAGCGTCTGGCGGAGATACACGCGTTCCATATATTGGTCTATTGTTACTCTTACCACTGTAGGCTATGGAGATTTTGTTGCCGTGAATATGGGCGAGAAAATTTTCACTATCTTATATATGCTCTTTAACATTGGCCTCAGTGCATATATAATCGGAAACATAACAAATCTGGTCGTCCATGGCACTGTCCGAACTCATGCGATGAGGGATGCCATCAACCAAACACGGAAATATGCAAGCAAAAATAGACTCCCAGAAGGCTTAAAAGAGCAAGTGCTGGCACACGTTCAGTTGAAGTTTAGAACAGCAGCGCTACAGCAAGAACAAGTGCTACAGGACTTGCCAAAGGCAATTAGATCGAGCATCGCTCAGCATCTTTTCCGTGACATAGTTGGAAATGCATATTTATTTAAAGGAGTCTCTGATCATTTTATCACCCAACTGGCGTCAGAAATCAAAGCAGAATATTACCCGCCTAAGGTTGACATTATCTTGCAAAATGAGATGCCATCATATTTCTATATTTTGGTATCTGGAGCAGTGGATGTGCTAATCTACATGAATGGAACTGAACAGCATTTGTTGAAACTAGAATATGGAGGGATGGCAGGAGAAATAGGAGTTATGTTTAATGTCCCCCAACCTTTCACAGTGAGATGTAGGAGGCTTTCCCAAGTCGTCCGAATTAGTCATGATCATTTCAAGCAAATGGTGCAACCATATAGTAATGATGGGAAAGCAATTGTCACCAACTTCAATCAGTACTTGAAGGGCTTGAAAAAGAGGGTGCAAGAAGAAATTTCTTATCTGGCAGAATTGTTAAGGGACCTTCATCTTGAGCAGGTAACACAAGAACAAGGCATGTATGATGAAGGTTCAAATTATCATGAAGATGAACCATATAAACAAGGAAAGAAAGGAAATTCTAATCCAAGGTCAAGTCTAGTCCCGCCCAGAGTGAAAATTCATGGACATCATCCTAAAGAGAACCGGAAGGAAAATCAAGCCTCACAGGCACTAGTACTTCTCCCAGATACAATGGAAGAACTTTTCAAATTAGCAGAGAAGAAGTTTGGGAAAAGAGGAAGCAAGATTCTTATGGCAGATGGCTCAGAAGTAGAAAAAATAAGCGTCATAAGAGAGAACGATAAGTTATATATCTTCTAA 1896 0.4214 MNQNKAPLPLPVRSRSSDEIRNLALASFSSNLLPAFGANIADDGHLNIRKYVITPFDHRYRLWQTFLVALVVYSAWASPFELAFTDVAVGSLWPVDLLADAFFAIDIVLTFFVAYLDTSTYLLVDDHKKIAFRYLRKLDFPMDVAATLPFLQIYQILMGKTYGEVLGFMNMLRLWRLRRVARIFCRLEKDIRISYSATRFCKLICVTLFAVHVAGCMYYWLAALDTNPGNTWIGKPTQDFEHMSVWRRYTRSIYWSIVTLTTVGYGDFVAVNMGEKIFTILYMLFNIGLSAYIIGNITNLVVHGTVRTHAMRDAINQTRKYASKNRLPEGLKEQVLAHVQLKFRTAALQQEQVLQDLPKAIRSSIAQHLFRDIVGNAYLFKGVSDHFITQLASEIKAEYYPPKVDIILQNEMPSYFYILVSGAVDVLIYMNGTEQHLLKLEYGGMAGEIGVMFNVPQPFTVRCRRLSQVVRISHDHFKQMVQPYSNDGKAIVTNFNQYLKGLKKRVQEEISYLAELLRDLHLEQVTQEQGMYDEGSNYHEDEPYKQGKKGNSNPRSSLVPPRVKIHGHHPKENRKENQASQALVLLPDTMEELFKLAEKKFGKRGSKILMADGSEVEKISVIRENDKLYIF 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0942 631 FunFam Potassium channel KAT2 367 503 - -
Prci2g0942 631 SMART cnmp_10 379 496 IPR000595 -
Prci2g0942 631 Gene3D Jelly Rolls 370 511 IPR014710 -
Prci2g0942 631 CDD CAP_ED 379 492 IPR000595 -
Prci2g0942 631 SUPERFAMILY cAMP-binding domain-like 308 498 IPR018490 -
Prci2g0942 631 Pfam Ion transport protein 61 308 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci2g0942 631 PRINTS EAG/ELK/ERG potassium channel family signature 293 302 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci2g0942 631 PRINTS EAG/ELK/ERG potassium channel family signature 96 106 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci2g0942 631 PRINTS EAG/ELK/ERG potassium channel family signature 275 286 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci2g0942 631 PRINTS EAG/ELK/ERG potassium channel family signature 107 116 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci2g0942 631 PRINTS EAG/ELK/ERG potassium channel family signature 249 266 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci2g0942 631 Gene3D - 61 302 - -
Prci2g0942 631 PANTHER POTASSIUM CHANNEL AKT1 25 515 IPR045319 GO:0005249|GO:0006813
Prci2g0942 631 MobiDBLite consensus disorder prediction 531 579 - -
Prci2g0942 631 ProSiteProfiles KHA domain profile. 562 631 IPR021789 -
Prci2g0942 631 Pfam KHA, dimerisation domain of potassium ion channel 561 630 IPR021789 -
Prci2g0942 631 MobiDBLite consensus disorder prediction 534 548 - -
Prci2g0942 631 FunFam Potassium channel KAT3 62 303 - -
Prci2g0942 631 Pfam Cyclic nucleotide-binding domain 399 482 IPR000595 -
Prci2g0942 631 Gene3D Helix hairpin bin 305 369 - -
Prci2g0942 631 SUPERFAMILY Voltage-gated potassium channels 55 302 - -
Prci2g0942 631 ProSiteProfiles cAMP/cGMP binding motif profile. 379 498 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0942 Prci-Chr2 6894797 6900572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0942 3 631 Ion Channels AT4G32650 55.205 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0942 K21867 - gmx:100794620 852.047