Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0902 ATGTTCTCCGGCAGCCAGCTCGACGCCACTGCCGCCTTCTCAGGCGGTGGATTCATGACAACCGAGTCTACCCAGCTCAACGATTCATCCCCATTACCGGCCAAAAGCCGGGACACGCAGGGTTTAGTTCCAGTAACAGTGAAGCAGATAAGCGAAGCGTCGCACTCTGGAGATGAAAAGTCGAATTTCCTAATCAACGGCGTGGATGTTACCAATGTAACCTTGGTTGGTATGGTGTTTGAGAAAGTTGACAGAAACACTGACGTTAGTTTTGTTCTGGATGATGGAACAGGGCGGATCACGTGTAGAAGATGGGTGAATGAGCCTTTTGACTCCAAGGAAATGGAAGAAATACGAGATGGTATGTATGTTCGTGTATATGGGCATTTGAAAAGCTTTCAAGGTGTAAAACAGGTTGTTGCTTTCTCAATCAGGCCGGTGATGAGTTTTGATGAGATTTCTTTTCACTTTATCGATTGCATACATAATCATCTTCACTCAAAAGTAAAGGTTGAAGGAGTTACTCCTGCACGCCCTTCATCTTTAACCACATCTCATGTATCAAATGGACATCAGGCACCATCATCTAATCCATTATATGCACAATATAGCGTGGATGGGCTCAAGGACTGTGATAAATTGGTCCTTGATTATCTGAATCAGCATTCAGACATGTCTGATGAAAGGGGAATACATGTTGATGAGCTTTCTCGAGAACTTAAACTTCCATTGGACAAGATCATGTTGTCTCTGAAAACACTTGGCGACGATGGATTAGTATACTCCACCATTGACGACAATCATTACAAGCAAGCTTGA 819 0.4371 MFSGSQLDATAAFSGGGFMTTESTQLNDSSPLPAKSRDTQGLVPVTVKQISEASHSGDEKSNFLINGVDVTNVTLVGMVFEKVDRNTDVSFVLDDGTGRITCRRWVNEPFDSKEMEEIRDGMYVRVYGHLKSFQGVKQVVAFSIRPVMSFDEISFHFIDCIHNHLHSKVKVEGVTPARPSSLTTSHVSNGHQAPSSNPLYAQYSVDGLKDCDKLVLDYLNQHSDMSDERGIHVDELSRELKLPLDKIMLSLKTLGDDGLVYSTIDDNHYKQA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0902 272 FunFam replication protein A 32 kDa subunit A-like 35 169 - -
Prci2g0902 272 Gene3D - 202 272 IPR036388 -
Prci2g0902 272 CDD RPA2_DBD_D 72 165 - -
Prci2g0902 272 Pfam OB-fold nucleic acid binding domain 73 146 IPR004365 GO:0003676
Prci2g0902 272 FunFam Replication protein A 32 kDa subunit 203 272 - -
Prci2g0902 272 SUPERFAMILY "Winged helix" DNA-binding domain 206 270 IPR036390 -
Prci2g0902 272 PANTHER REPLICATION PROTEIN A-RELATED 6 270 IPR040260 -
Prci2g0902 272 Gene3D - 38 169 IPR012340 -
Prci2g0902 272 PIRSF RPA32 1 272 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Prci2g0902 272 SUPERFAMILY Nucleic acid-binding proteins 42 166 IPR012340 -
Prci2g0902 272 Pfam Replication protein A C terminal 180 267 IPR014892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0902 Prci-Chr2 6690173 6693866 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0902 1 270 Core DNA Replication Machinery Family AT2G24490 48.014 3.00e-91 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0902 K10739 - qsa:O6P43_015598 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0902 2 6690173 6693866 Prci2g0902 2 6690173 6693866 ECH