Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0870 ATGGCGGTGGAGCTGATGGGGTTTCCGAAAATGGACGAGCAGACGGCAATTCAGGAGGCTGCATCGGAGGGATTGAAGGGCATGGAGAATCTAATCCGTCTTCTCAACCACAAGCCCAATCTCGTAGACTGCTCTGATCTCACCGATGTTACTGTTTCTAAGTTCAAGAAACTCATTTCTCTTCTAAATCGCACCGGCCATGCCCGGTTCAGAAGAGCACCGATTCTCTCCTCTTCCAGCTCGTGTCCCCTTTCTACTCCAAAGTTGCCGACGCCATCATCCACTGCGCCCTCGTCGGCCAACATTTCCACACCGCAAATTCCGAATCTATCACCGGCGCAGTTCGCCTCTCCGGCGCCTATCGTAAATCCAGTAACCGTGCATCAGGCTCCGATCAACAACAGCACTGCTCCATCCGGTTTCGTTCCGGCTCAGTCACAGTCTCTGACTCTCGATTTCACAAAACCTAATATATTGAGCTCCAACACGAAGTCTCTAGAGCTCGAGTTCTCTAAGGAAACCTTCAGCGTGTCTTCAAACTCATCGTTCATGTCGTCGGCCATCACCGGCGACGGTAGCGTATCGAACGGCAAACAAGGATCGTCGATCTTCCTTACACCGGCGGCACCAACGGTCTCAGGCAGCGGGAGGCCACCCCTCTCGACCGTACCGACGAAGAAGAGATGCCACGACCACCGCGAGCACTCCGATGACCTCTCCGGCTCCAGCAAGTGCCACTGCGCAAAGAGAAGGAAGAATCGGACGAAGAAGGTGGTGAGAGTGCCGGCGATTAGTTCGAAGATTGCCGATATTCCGCCGGACGAGTACTCGTGGAGGAAGTACGGTCAGAAGCCGATCAAGGGGTCGCCATATCCAAGGGGTTACTATAAGTGCAGCACGGTGAGAGGGTGTCCGGCGAGGAAGCACGTGGAGAGGGCCCCAGATGATCCGGCGATGCTGATCGTAACCTACGAGGGGGAGCACCGTCACGCGTTGCAGGCCGCGATGCAGGATAACGGAGCCGGGGGTGTTGGGTTAGTCTTCCAGTCAACGTGA 1056 0.5549 MAVELMGFPKMDEQTAIQEAASEGLKGMENLIRLLNHKPNLVDCSDLTDVTVSKFKKLISLLNRTGHARFRRAPILSSSSSCPLSTPKLPTPSSTAPSSANISTPQIPNLSPAQFASPAPIVNPVTVHQAPINNSTAPSGFVPAQSQSLTLDFTKPNILSSNTKSLELEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGSSIFLTPAAPTVSGSGRPPLSTVPTKKRCHDHREHSDDLSGSSKCHCAKRRKNRTKKVVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPAMLIVTYEGEHRHALQAAMQDNGAGGVGLVFQST 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0870 351 MobiDBLite consensus disorder prediction 78 102 - -
Prci2g0870 351 SMART WRKY_cls 272 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g0870 351 MobiDBLite consensus disorder prediction 224 245 - -
Prci2g0870 351 MobiDBLite consensus disorder prediction 190 220 - -
Prci2g0870 351 ProSiteProfiles WRKY domain profile. 267 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g0870 351 Pfam Plant zinc cluster domain 226 270 IPR018872 -
Prci2g0870 351 Pfam WRKY DNA -binding domain 274 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g0870 351 Gene3D WRKY domain 260 332 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g0870 351 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 335 IPR044810 GO:0003700
Prci2g0870 351 FunFam WRKY transcription factor 65 256 333 - -
Prci2g0870 351 MobiDBLite consensus disorder prediction 190 245 - -
Prci2g0870 351 SUPERFAMILY WRKY DNA-binding domain 270 332 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0870 Prci-Chr2 6564007 6565814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0870 1 350 WRKY Transcription Factor Family AT2G24570 58.726 1.55e-122 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci2g0870 WRKY 9.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0870 - - qsa:O6P43_019342 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0870 2 6564007 6565814 Prci2g0870 2 6564007 6565814 ECH