Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0852 ATGTGGTTGCCGAAGAATCAACCGGAGAGGAAGGATGGAGTTCAGGGGATAGTGGCAGTGGCAATAGACAGAGACAAAGGAAGCCAGAATGCACTCAAATGGGCCATTGATCATCTCCTTGTACGAGGATCCACCGTAGTTCTCATCCATGTCAAGGTTAAGCCATCTTCATTGTCTGCATCGCCTTCTCTTCAAGCCCCAAGGGCAAATGGTGGTGGTGATGAGAATTCTTTAATATGCAAAGATCCTGATCCTCAAACCAGAGAAATTTTCCTACCATATCGGGTCTTCTGTACACGGAAAGATATACAATGTAAGGACGTTATACTCGAAGATGCAGATGTATCAAAAGCTCTAATAGAATACGCTTCACATACAGCAATCGAGCATTTGGTTCTTGGTGCGTCAACCAAAGCTGGTCTGCTTCGATTCAAGGCAGCGGATATTCCAGGAACCGTAGCAAAAGGGGCACCGGATTTTTGTAACGTGTATGCTGTTGCTAAAGGAAAAATCCATTCAATGAGATCAGCTACTCGTTCTGCACCAGCTATTTCTCCTCTACGCAACCAGCTCACTCAACCAAGCATCAAGTCAGATCACTCAGACCCAGGACCAGGAGTGCCTCCAACTAATAATAACAATATGAGAGGACGTGATAGGCGAAGCCTTGATGGTCCTTATAAGTCGCAGGATGAATCCGAATCCTTCAGGTCACCGTTCACTAGGAGAGGTATGAATGGCAAGTCATATGGAGAACTGTCTATACCAGATACTGACATATCCTTTGTGAGTTCTGGTGGAAGGTCAAGTACAGATCGCATGTTCCCTTCATTATTTGATACCCCAGACGCTGGATTCTCCAATCCACGCCTGTCTTATAGCTCAGAACCAGATAGTCATAGCTTCGAGTCCTCGTCGCAGTATGGGAGAAGGTCTGTGGATATGGTCAGCCCTCCTCCTGAATTTTCATCAATTGCACAGGATAGTGACAGACTTTCTTCTTCATCGGGCCTGGATGATGTGGAGGCTGAAATGAGGAGACTGAAGTTGGAGCTCAAGCAAACAATGGAAATGTATAGTACAGCTTGCAAAGAAGCACTCTCAGCAAAACAGAAAGCAATAGAACTTCAGCGATGGAAGTTAGAGGAAGAGCGAAGGTTAGAAGAGGCAAGGCTAGCAGAGGAAGCTGCATTGGCAATTGCAGAGAAGGAGAAGGCCAAATCCAAAGCAGCTCTTGAAGCTGCTGAGGCACAAAAGAGAATAGCAGAACTGGAAGCACAAAAAAGATTGAGTGCAGAAATGAAAGCACTCAGAGAAGCAGAAGAGAAGAAAAAAGCACTAGATGCCTTAGTAAATATAGATGTCAGGTACAGAAAGTATTCCATTGAGGACATTGAAGCTGCAACCCAGTTCTTCCAAGAGTCCCAGAAAATTGGAGAAGGTGGTTATGGCCCGGTCTATCATTGCTATCTGGACCACACACCCGTTGCAGTTAAGGTTCTACGTCCCGATGCAGCACAAGGAAGATCACAGTTTCAACGAGAGGTTGAGGTACTTAGTTGCATACGGCATCCAAACATGGTTCTCCTGCTAGGAGCCTGCCCAGAATATGGATGCCTTGTATATGAATTCATGGCTAATGGAAGCCTGGACGATCGTCTATTTCGCCGAGGAAACACTCCGTCTCTTCCTTGGCAGCTAAGATTCAAAATTGCAGCTGAAATAGGCACTGGCTTATTGTTCCTTCACCAGACAAAACCAGAGCCTCTGGTTCATAGGGACTTGAAACCAGCTAACATCTTACTTGACCGCAACTTCGTGGCCAAGATCAGTGACGTGGGTTTGGCCAGGCTAGTCCCACCCTCTGTGGCTGACAATGTCACACAATACCGCATGACATCCACTGCTGGAACTTTCTGCTACATAGACCCAGAATATCAGCAAACAGGAATGTTGGGGGTGAAGTCAGACATATATTCCCTTGGGATCATCTTCTTGCAGATACTAACAGCAAGACCACCAATGGGTTTAACCCATCATGTTGAAAGAGCCATTGAAAAGGGTACATTCAAGGATATGTTGGATCCAACAGTGCCTGATTGGCCAAAAGAAGAGGCCTTGAATCTTGCCGAGTTGGCTCTCAAATGTGCAGAGTTAAGGAGGAAGGACAGGCCTGATCTGGGCAAAGTCATATTACCAGCTAACAGATTGAGAATGCTTGCCGACAGTAACAATCATCAGTCACTTTTGAGTGGCTATTTAAGCCCTCCCAATCTGAGCCTAGTTTCAGCGCCGGTGGTATGTTTTGCATTTTCTGTCAACTTTTTCTTTTTCTTTTTTGCATGCTGTGCCAAAAAATCAGTGTTAGTAGTTTATTCACAATGTGTTGCTGGGTGCGGTTGTCCAGGTGCAGGAACAAATCGGTTCCGCAGCCTATTCTGGGGAGAACACAAGAAATAG 2460 0.4569 MWLPKNQPERKDGVQGIVAVAIDRDKGSQNALKWAIDHLLVRGSTVVLIHVKVKPSSLSASPSLQAPRANGGGDENSLICKDPDPQTREIFLPYRVFCTRKDIQCKDVILEDADVSKALIEYASHTAIEHLVLGASTKAGLLRFKAADIPGTVAKGAPDFCNVYAVAKGKIHSMRSATRSAPAISPLRNQLTQPSIKSDHSDPGPGVPPTNNNNMRGRDRRSLDGPYKSQDESESFRSPFTRRGMNGKSYGELSIPDTDISFVSSGGRSSTDRMFPSLFDTPDAGFSNPRLSYSSEPDSHSFESSSQYGRRSVDMVSPPPEFSSIAQDSDRLSSSSGLDDVEAEMRRLKLELKQTMEMYSTACKEALSAKQKAIELQRWKLEEERRLEEARLAEEAALAIAEKEKAKSKAALEAAEAQKRIAELEAQKRLSAEMKALREAEEKKKALDALVNIDVRYRKYSIEDIEAATQFFQESQKIGEGGYGPVYHCYLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLDDRLFRRGNTPSLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNFVAKISDVGLARLVPPSVADNVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVERAIEKGTFKDMLDPTVPDWPKEEALNLAELALKCAELRRKDRPDLGKVILPEXNRLRMLADSNNHQSLLSGYLSPPNLSLVSAPVVCFAFSVNFFFFFFACCAKKSVLVVYSQCVAGCGCPGAGTNRFRSLFWGEHKK 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0852 820 Gene3D Transferase(Phosphotransferase) domain 1 545 749 - -
Prci2g0852 820 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 155 - -
Prci2g0852 820 Coils Coil 364 450 - -
Prci2g0852 820 PANTHER OS02G0152300 PROTEIN 18 748 - -
Prci2g0852 820 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 444 544 - -
Prci2g0852 820 MobiDBLite consensus disorder prediction 177 337 - -
Prci2g0852 820 Gene3D Phosphorylase Kinase; domain 1 451 544 - -
Prci2g0852 820 Pfam Universal stress protein family 18 157 IPR006016 -
Prci2g0852 820 FunFam U-box domain-containing protein 51 545 745 - -
Prci2g0852 820 MobiDBLite consensus disorder prediction 217 238 - -
Prci2g0852 820 SMART serkin_6 472 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0852 820 MobiDBLite consensus disorder prediction 60 79 - -
Prci2g0852 820 Coils Coil 338 358 - -
Prci2g0852 820 SUPERFAMILY Protein kinase-like (PK-like) 455 730 IPR011009 -
Prci2g0852 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 590 602 IPR008271 GO:0004672|GO:0006468
Prci2g0852 820 ProSiteProfiles Protein kinase domain profile. 472 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0852 820 Gene3D HUPs 17 167 IPR014729 -
Prci2g0852 820 Pfam Protein kinase domain 472 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0852 820 MobiDBLite consensus disorder prediction 287 312 - -
Prci2g0852 820 CDD STK_N 17 169 - -
Prci2g0852 820 MobiDBLite consensus disorder prediction 178 216 - -
Prci2g0852 820 MobiDBLite consensus disorder prediction 258 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0852 Prci-Chr2 6433025 6438036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0852 1 766 Receptor kinase-like Gene Family AT1G78940 55.909 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci2g0852 Pkinase 7.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0852 - - qsa:O6P43_019335 1051.97