Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0842 ATGGCTTACCACAAAGCCTATCGTGGGCTTCTCATCATGCTCTTGGCCTTCGTCGTAGCCGTTGGCTTTCTGCAGCCATCTCTAGGTGATGACGCTCAGGTTCTGATCAAGTTCAAGAGCTTCTTGTCCAATGCTGGTGCCTTGAACAACTGGAACGACTCTATCAGTATCTGTGACTGGAACGGTGTGAGATGTCGCAAAGGCGGGATTCACTTGAAACTGGAGAAGATGGGACTGAGTGGCACTATAGATATTGATACCTTGTTGGAATTGTCCAATTTGCAGAGTGTTAGTGTCAAGGACAACAATTTTGAAGGTAAAATGCCTAGCTTTAACAGGATTGGGAGGTTGAAGGGGCTGTATTTGTCCCATAACAAGTTCTCTGGAGACATACCTGATAATGCTTTTGAGGGTATGAAATACCTGAGCAAGGTATACTTGGACGAAAATGAGTTTACAGGTCACATTCCTAGTTCTCTTGCTGAATTGCCCAACCTTTTGGATCTGGACTTACATTCGAATCGTTTCGAGGGCAACATACCAGAGTTTCGAACGAAAAATAAGCTCAGATTATTTAATTTATCGAACAACCTGCTAGAAGGTGAAATACCAGGAAGCGCAAACGTTGGCGATCCCAGTGCATATGAGGGCAACAAAGGTCTATGTGGAAAACCTTTGAATAACCCCTGCAAAAAGTCTTCCAGGAAACGAGACCTTCTTATAACTGCCATTGTAGTGGTGGCCGTGATTTTCTTGGCTTCAATTCTAGCAGCTACATTTGTTGTTCATCGCCGGAGGCGAAGACGTTCTCAGATGACGAAAACTACGGTTCAGCAAGTGCAACATCAAAACAGTGCACCCTTGGTAATCAAGAAGGAGGAGGCTCCATCACTTGATCTGACAGCTGAATTCAAGACGGGTGAGAATGGAGATCTGAACTTCGTTAAGAGAGACGCGGAGAGATTTGATCTGCAAGACCTTCTTAGAGCCTCGGCTGAAGTTCTGGGTAGTGGTAGCTTTGGGTCTACGTATAAGGCTATTGTTTTGAACGGACCAGCCGTCGTCGTGAAGAGATTCAAGCACATGAACAATCTTGGGAAAGAAGAGTTCTCTGAGCATATGAGAAGGCTCGGAAGTTTGAGCCACCCTAATCTTCTTCCTCTTGTTGCATTCCACTTCAGAAAAGAAGAGAAGCTTCTGGTTTATGAGTTCGTTGAAAATGGCAGCTTGGCCAGTCATCTCCATGGTAGGCATGGTTCTGGACTAGACTGGCCGACCCGATTGAAAATCACAAAAGGAGTGGCGAGAGGATTAGCTTACCTCTACAGAGAATTCCCGGATCAAAAACTGTCTCACGGACATCTCAAATCCTCGAATGTTCTGCTAGACCAGTCAATGGAGCCTCGTTTGACCGAGTACGGACTCGTCCCAGTGATGAACAAGAGCCACGCTCAACAGTTCATGGCGGCATACAAGGCCCCAGAGGTAAATCAATTGGACCGACCCAACCAGAAGACCGACGTGTGGTGTTTAGGAATTCTCATTCTGGAACTCCTGACAGGAAAATTCCCGGCAAATTACCTGCGACATGGGAAAGGAGGAAGCTCGGACTTGGCCACGTGGGTGAACTCGGTGGTGAGAGAGGAGTGGACAGGGGAAGTGTTCGATAAGGACATTCTGGGGACGAGGAATGGTGAGGGAGAGATGCTGAAGCTGTTGAAGATAGGAATGTATTGCTGCGAATGGGACGTGGAGAATCGGTGGGACTGGAAGGAGACGGTGGCCAAGATTGAGGAATTGAAAGAGAAGGATAGTGAAGATGATTTCTCTTCGTTTAATAACAGTGAAGCGGATTTCTCCTCCAGGCCTATGACCGACGAGGATTTGTCGTTCACAGCACCCAATTAG 1908 0.468 MAYHKAYRGLLIMLLAFVVAVGFLQPSLGDDAQVLIKFKSFLSNAGALNNWNDSISICDWNGVRCRKGGIHLKLEKMGLSGTIDIDTLLELSNLQSVSVKDNNFEGKMPSFNRIGRLKGLYLSHNKFSGDIPDNAFEGMKYLSKVYLDENEFTGHIPSSLAELPNLLDLDLHSNRFEGNIPEFRTKNKLRLFNLSNNLLEGEIPGSANVGDPSAYEGNKGLCGKPLNNPCKKSSRKRDLLITAIVVVAVIFLASILAATFVVHRRRRRRSQMTKTTVQQVQHQNSAPLVIKKEEAPSLDLTAEFKTGENGDLNFVKRDAERFDLQDLLRASAEVLGSGSFGSTYKAIVLNGPAVVVKRFKHMNNLGKEEFSEHMRRLGSLSHPNLLPLVAFHFRKEEKLLVYEFVENGSLASHLHGRHGSGLDWPTRLKITKGVARGLAYLYREFPDQKLSHGHLKSSNVLLDQSMEPRLTEYGLVPVMNKSHAQQFMAAYKAPEVNQLDRPNQKTDVWCLGILILELLTGKFPANYLRHGKGGSSDLATWVNSVVREEWTGEVFDKDILGTRNGEGEMLKLLKIGMYCCEWDVENRWDWKETVAKIEELKEKDSEDDFSSFNNSEADFSSRPMTDEDLSFTAPN 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0842 635 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Prci2g0842 635 FunFam Pollen receptor-like kinase 1 405 611 - -
Prci2g0842 635 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Prci2g0842 635 Pfam Leucine rich repeat 116 176 IPR001611 GO:0005515
Prci2g0842 635 SUPERFAMILY Protein kinase-like (PK-like) 333 598 IPR011009 -
Prci2g0842 635 Gene3D Ribonuclease Inhibitor 27 111 IPR032675 -
Prci2g0842 635 Gene3D Ribonuclease Inhibitor 113 230 IPR032675 -
Prci2g0842 635 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 606 IPR046959 -
Prci2g0842 635 MobiDBLite consensus disorder prediction 612 635 - -
Prci2g0842 635 ProSiteProfiles Protein kinase domain profile. 329 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0842 635 Gene3D Phosphorylase Kinase; domain 1 297 404 - -
Prci2g0842 635 Gene3D Transferase(Phosphotransferase) domain 1 405 622 - -
Prci2g0842 635 FunFam pollen receptor-like kinase 1 299 404 - -
Prci2g0842 635 FunFam Nuclear pore complex protein NUP107 28 181 - -
Prci2g0842 635 MobiDBLite consensus disorder prediction 602 635 - -
Prci2g0842 635 SUPERFAMILY L domain-like 51 205 - -
Prci2g0842 635 Pfam Protein kinase domain 332 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0842 Prci-Chr2 6411041 6414288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0842 6 627 Receptor kinase-like Gene Family AT4G31250 47.697 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci2g0842 Pkinase 4.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0842 - - tpra:123893577 754.592