Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0801 ATGGAAGGTGACAGGACAACGCCTGTTTCATCCGACGGGCTCAGTGATGGTGCCCAGAAAATTAGAGCACTGCATGGACGGACTACTGGCCCTACAAGGCGTTCTACCAAAGGACAGTGGACGCCTGAAGAGGATGAGATTTTGCGGATGGCTGTCCAGCGTTTTAAGGGAAAGAATTGGAAAAAAATTGCGGAGTGCTTCAAGGATAGAACAGATGTACAATGCCTACATAGGTGGCAAAAAGTCTTAAATCCTGAACTGATCAAAGGTCCATGGTCTAAAGAGGAAGATGAAATAATAATTGATTTAGTGAATAAATATGGGCCAAAAAAGTGGTCAACTATTGCACAGCACCTACCGGGACGCATCGGGAAACAATGCCGAGAAAGGTGGCACAATCATCTTAATCCTGCTATAAACAAGGAAGCGTGGACCTATGAAGAGGAGCTGGCACTAGTACGCGCTCATCAGATTTATGGGAACAGATGGGCAGAATTGACCAAGTTCTTGCCTGGAAGGACGGACAATGCAATAAAAAATCACTGGAACAGTTCAGTAAAAAAGAAATTGGATTCTTACTTAGCATCAGGTTTGCTTACTCAGTTCCAAGACGTACCCCTGGCTGGAAATCCAAATCAACCCGTGGTTTCTACCGCTTTGAGGCAGCAGTGTAGTGGAGACGATAATGGTTATAAGGGTACTGAAGGAGAGGAAGTTTCTGAGTGTAGCCAAGAGTCAGCTAATGTTAGTTGCTTCCCATCTGCTAGAGATATGACAAACGTTGCATTAAATAAAACCGAGGAACTAAAGCCAAGTGAAGATATCAGTCTAGGAAAGGAGCAGAGTCCTAGTCAAGCATCTTGTCTAGAGCCATATTGCATATCTCTGGATGACGTCACAATATCCATTTCAGATGTTGCTCGTGAAGATGCTTCTAATTCTGATTTCATTGAGCAAACATACTCATATGATCCTGGAAATTCTGCAAGCAGGGATGCTCAGTTTACCTTACATGCCCTCCCTAACAATGCTTCATCAGACTTGGATCAGGAATGTTCACTTGTTCGAAGGGAAATGGCAGATTGTGTTGAAAGCCATGACATTGTGAATGTCCAATTTCATACTTCAGTGGGATCAGGTATTTCAACATCCATGGGACCCCCATGCATAGATCTTGCGAAACAAGAGCACATGTTAATATCTAATGAAGAATGTTGTAGAGTCCTATATTCAGAGGCAATAAATGATGGAGGCTTTTCTTCAGGAGATTATAACAAAAGTGTTAATACAGTTTCATCCGGATGCGTTTCATTATTTGGCCAATCATCTGACATCCATATGCCTCAGACTGGTGGAACCTCAGCACCGCAAACTTGTCCCCTAAAATCTAATGATTTAATAGGATCTTCATGCTCTCAATCTCCAATGATTTCTGCTAATGATGGTGAATTAGTGTATGCAGCTGAAGGCAACCATCTATTTGGGGCTGATGGTCTGCAATTTGTCTCCAGGGCTCAGGATAGCTTCATTTATTATGCTAACAACTCATCCCTTGCTCCTTGTATGGATGCTATAAATAGTGGAGAAATCCACACGGGACCAGATATTGTGGAGGATGCTTCAAGATTGGCGCCTGTAAATACATTTGGGTGTGTATCAGATGCCAAGCTTACTTTTTGTTCAGAGGAAGAAAGGACAGATGCGCATATAGAACAGTTTGAGACCGGAGCTCTTTGTTATGAACCGCCTCGATTCCCAAGTTTGGATATTCCTTTCTTAAGCTGCGATCTTATACAATCAGGAGGGGACATGCAACAAGAATTTAGTCCACTAGGTATCCGCCGGCTTATGATGTCATCTATGAACTGTCCAACTCCCCTGCGGCTGTGGGATTCACCTTCTCATGATGATAGCCCAGACGCTTTGCTAAAAAGTGCTGCTAAAAGTTTCACTGGTACACCATCCATATTGAAGAAACGACACCGAGACTTATTGTCGCCTCTATCAGACAAGAGAATCGACAAGAAACTTGAGATTGACTTGACGTCCACGTTGGCCACACATTTTTCACGTTTGGAAGTCATGTTTGATGATGACGGGACTCGGGAAGTAGTTATGCTTTCTCAGCCCTTAATGGAGAAAGAGAAATCTGGAGCAACTGTTGAGGATGCAGAAAACTGTGGACAATCTTTGAAAGGAGAACATGCAGAAGGAAGAAGTGAATTTACACTTTTGAGCAACGAAAAGTCAGAGAAAGAGACAGTCGACAGCGATTCTCAGGATTTCCAGCGACCTTATTACGTTGATTCGAAGATGAAGGTTGATTGCGAGGTCGATAAAGCTGCTGGGAGTGTGCAACAGCCTTCTGGAGTCTTAATTGAACATGATATGAATGACTTGCTATTATATTCTCCTAATCAACTATGTTTTAAACCGGACAAATCTCACTGTTCAAGTGCTAAAACTTCAAAAAACCTGAACAACAGAAGTTTGGAAGCAGCTTTAAATAATAGCATTTCTTCAAACCCATGCTCAAGTGATAGCTCCCCTTCTGTTCTTGAAAAAAATCATGACGTTTCTTCATTTCCAGTTACTTGTGTGCCATCCGAGAACCTTGGTGATCATCCTGGAAATGATGCTGGTTTTGACACATTTAGCATATTCGGAGGAACACCTTTTAGAAGAAGCATTGAATCACCTTCAGCATGGAAGTCTCCTTGGTTCATGAACACTTTCTTGCCTAGCCCCAGACTTGATACTGAAATAACAATCGAGGATTTTGGGTATTTTATAAGCCCAGGCAATAGGAGCTATGATGCGATTGGGTTGATGAAACAGGTGAAGGAACAAACAGCGGCTGCGTATGCCAATGCTCAGGAGATTTTGGAAAGTGTAACTCCCAAAGCAAAAGATTCATCTGGACATGTCAGGGATACAGACCAGGAAAACAAGGGTCATCCTAATCAGCCCGTGAATCATTCTCAGGTGCCCCGAAATGCTTTGGTCGAGCGACGTATACTCGACTTCAGTGAGTGCAAAACACCAGGGAAGGAGGGCAACGGCAAAGGCTCTGCTCAGAACTTCTCAAGCCCTTCGTCATATTTGTTAAAGGGATGTAGATAG 3123 0.43 MEGDRTTPVSSDGLSDGAQKIRALHGRTTGPTRRSTKGQWTPEEDEILRMAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELIKGPWSKEEDEIIIDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPAINKEAWTYEEELALVRAHQIYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLTQFQDVPLAGNPNQPVVSTALRQQCSGDDNGYKGTEGEEVSECSQESANVSCFPSARDMTNVALNKTEELKPSEDISLGKEQSPSQASCLEPYCISLDDVTISISDVAREDASNSDFIEQTYSYDPGNSASRDAQFTLHALPNNASSDLDQECSLVRREMADCVESHDIVNVQFHTSVGSGISTSMGPPCIDLAKQEHMLISNEECCRVLYSEAINDGGFSSGDYNKSVNTVSSGCVSLFGQSSDIHMPQTGGTSAPQTCPLKSNDLIGSSCSQSPMISANDGELVYAAEGNHLFGADGLQFVSRAQDSFIYYANNSSLAPCMDAINSGEIHTGPDIVEDASRLAPVNTFGCVSDAKLTFCSEEERTDAHIEQFETGALCYEPPRFPSLDIPFLSCDLIQSGGDMQQEFSPLGIRRLMMSSMNCPTPLRLWDSPSHDDSPDALLKSAAKSFTGTPSILKKRHRDLLSPLSDKRIDKKLEIDLTSTLATHFSRLEVMFDDDGTREVVMLSQPLMEKEKSGATVEDAENCGQSLKGEHAEGRSEFTLLSNEKSEKETVDSDSQDFQRPYYVDSKMKVDCEVDKAAGSVQQPSGVLIEHDMNDLLLYSPNQLCFKPDKSHCSSAKTSKNLNNRSLEAALNNSISSNPCSSDSSPSVLEKNHDVSSFPVTCVPSENLGDHPGNDAGFDTFSIFGGTPFRRSIESPSAWKSPWFMNTFLPSPRLDTEITIEDFGYFISPGNRSYDAIGLMKQVKEQTAAAYANAQEILESVTPKAKDSSGHVRDTDQENKGHPNQPVNHSQVPRNALVERRILDFSECKTPGKEGNGKGSAQNFSSPSSYLLKGCR 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0801 1040 CDD SANT 91 135 IPR001005 -
Prci2g0801 1040 Gene3D - 89 140 - -
Prci2g0801 1040 MobiDBLite consensus disorder prediction 970 984 - -
Prci2g0801 1040 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Prci2g0801 1040 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Prci2g0801 1040 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Prci2g0801 1040 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Prci2g0801 1040 PANTHER MYB PROTEIN-RELATED 37 110 - -
Prci2g0801 1040 Gene3D - 142 201 - -
Prci2g0801 1040 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Prci2g0801 1040 MobiDBLite consensus disorder prediction 965 998 - -
Prci2g0801 1040 FunFam Transcription factor MYB3R-2 142 204 - -
Prci2g0801 1040 SUPERFAMILY Homeodomain-like 38 93 IPR009057 -
Prci2g0801 1040 MobiDBLite consensus disorder prediction 1020 1034 - -
Prci2g0801 1040 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Prci2g0801 1040 SMART sant 140 188 IPR001005 -
Prci2g0801 1040 SMART sant 88 137 IPR001005 -
Prci2g0801 1040 SMART sant 36 85 IPR001005 -
Prci2g0801 1040 MobiDBLite consensus disorder prediction 1 42 - -
Prci2g0801 1040 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Prci2g0801 1040 CDD SANT 40 83 IPR001005 -
Prci2g0801 1040 Gene3D - 36 88 - -
Prci2g0801 1040 MobiDBLite consensus disorder prediction 1012 1040 - -
Prci2g0801 1040 FunFam Transcriptional activator Myb isoform A 36 88 - -
Prci2g0801 1040 FunFam Transcriptional activator Myb isoform A 89 141 - -
Prci2g0801 1040 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Prci2g0801 1040 CDD SANT 143 183 IPR001005 -
Prci2g0801 1040 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Prci2g0801 1040 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0801 Prci-Chr2 6099262 6106181 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0801 21 1040 MYB Transcription Factor Family AT4G32730 44.359 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci2g0801 Myb_DNA-binding 1.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0801 - K09420 aprc:113848458 1261.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0801 2 6099262 6106181 Prci2g0801 2 6099262 6106181 ECH