Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0798 ATGGAAGGTGACAAGACAACCCCAGCTCCATCAGATGGGCTCAGTGACAGTGTTCAGAAAATTAGAGCCCTGCATGGGCGAACTAGTGGCCCTACCAGGCGTTCTACGAAAGGACAGTGGACTCCTGAAGAGGATGAGATCTTGCGGAAGGCAGTTCAACGTTTCAAAGGAAAGAATTGGAAGAAAATTGCGGAGTGTTTCAAGGATAGAACAGATGTACAATGCCTACATAGGTGGCAGAAAGTCTTAAATCCAGAACTGGTCAAAGGTCCATGGTCCAAAGAGGAAGATGAAATAATAATTGATTTGGTGAACAAATATGGGCCAAAAAAATGGTCTACTATTGCACAGCACTTGCCCGGACGAATTGGTAAGCAATGCCGAGAAAGGTGGCATAATCATCTCAATCCTGCTATAAACAAAGAGGCATGGACCCAAGAAGAGGAGTTGGCTCTAATACGTGCGCATCAAATTTATGGGAACAGATGGGCCGAGTTGACGAAGTTCTTGCCTGGAAGGACGGACAATGCTATAAAAAATCACTGGAACAGTTCTGTCAAAAAGAAATTGGATTCTTACTTGGCATCAGGTTTGCTTATACCCCAAGTTGGACGTCCAAATCAACCCATGGTTTCCACATCTTCGAGGTTACTTTGTAGTGGAGATGATAGTGGTCAGAAGGGAATTGGAGAGGAAGTTTCAGAGTGTAGCCAAGAGTCTGCTAGTGCTAGTCGTCCACCGATTGCCCAAGAAATGACGAAGGTTGTTTTACATACTAGAGAAGAAACCAGGCCAACTGAATGTTCTAGTCTAGGAAAGGAGCAAAGTCCTAGTCAAGCATCATGTTCAGACCCATATTATATACCACTGGATGATGTTACCATATCCAACTCAGACATGGCTCGTGAAGAGGCTTCCTCTTCTCAATTCACTGAGCAAAACTACTCACACGAGCCTGGAAAGTCTGCAGGCATGGATAATGGATCCCACTTGCATGCTTTACCCGGTATTTCATCATTGGACTTGGGTCAGGAATTCTCGCTTTTGCAAGGAGATTGTACAGTTTCTGATGAGAGCCATGACGTTGTGAATGTTCAATTTCATACTTCAGTTGGGTTAGGTGTCGCAACACCTGTTGATCCCACGTCTATGGATTCTTCTAAACCAGAGGACATGTTAATAGCTGGTGAAGAATGTTGTGGAATTCTATTTTCAGATGCAATGAATGATGGGACCTTTCCCTCTCGAGATCATAACAAAGGTGTTGATATGGTTTTGTCTGCATGCACTTCAAATCTTTTCCAATCACCTGAGATCCAGATATCTGATGCTGGTCGAACCTCAGCTGCGTTTAAAACTTGTCCAACAAGATACAATAATTTAATAGAATCTTCATGCTGCCAATCTTTCCCAATTGTTCCCTCGTCGCTTTCAGCTAATGATGGTAGAGTAGTGTACACTGCTGAAGCCGCTCAATTATATGGAGGAGATGATCAGCACATTGCCTCCAGTGCACGTGACAGCTTCATTTACCCCAACGACTCATCCATCTCAACTTGCATAGATATTATAGATAGTGCTGAATTGCATGATGGACCCAATATTGTGAATGATGCCTTAAGATTGGTCCCTGTAAATAATTTTACCTGTGCATCGGATGCTCAGCAAACTCGTAATCCTATGGATGAAAAGACAGATGTGCAAACAGAACAGGAGGACACAGGATCTCTATGTTATGAACCTCCTCGATTTCCAAGCTTGGATATTCCCTTCTTCAGCTGTGATCTAATACAACATGGAGGGGATATGCAGCAAGATTTCAGTCCGCTGGGTATCCGCCGGCTCATGATGTCTTCAGTGAACAGTCCAACTCCATTGATGCTGTGGGACTCACCATCTCGTGATGATAGTCCAGATGCTTTCTTGAGAAGTGCTGCAAAAACTTTCACTGGTACACCATCCATATTAAAGAAGCGACGCCGGGACTTGTTATCACCATTATCAGATAAGAGAATTGAGAAGAAACATGAGACCGACATGACATCCACGTTGACTACACATTTTTCACGTTTGGATGTCATGTTTGATGACAATGAAGCTCAGGCCGCAAATATGCTTCCTCCATCTTCAATACAGAAGAATAAAAACGGAACCTCTGATGATGATAAAGAAAATTATAGGCCAGCTTTGAAAGGAGAACATCTAGAGGGAAAAAAGGAATCTAACATTTTGAGGTGCAAAGAGTCAGAAAAAGATACCGATGAAAATACTCGGGACGCTGATTCGAAGATGGAGACTGATGTTGACGCTACTGCTGCAGCTGAGATTGTGCAGCAAGCTTCCGGAGTCTTGAGCGAACATGATATGAATGACTTGCTATTGTATTCTCCAGATCAAATTCATTTTGGCTCGGATAGTACTCACAGTTCAAGAGCTAAAACCCCCAAAAACCTCAACAACAGAAGCTTGGAAGCAGTTCCGAATCAGAATATCCCTCCAAAATCATTTTATGTAAATCCATACACAAGTGATTGCTCTCCTTCTGTTCGTGCAAAGGAGCATGAAATTTCTTCAGCCCGACCATCTCATTGTTCATCTGCCCCCGGGGAGAATACTGGTGATCATACTAGGGATGATGCTGGTTTTGAAACATTCAACATATTTGGTGGAACACCTTTTAGAAGAAGCATCGAATCACCTTCATCATGGAAGTCCCCTTGGTTCATTAACACTTTTCTGCCTAGCCCCAGAATTGATACTGAGATAACGATTGAGGATTTTGGGTATTTAATGAGCCCAGGCGATAGAAGCTACGATGCAATTGGATGGATGAAGCAGGTCAAGGAACAAACTGCGGCTGCATATGCCAATGCTGAGGAGATTTTGGAAATTGACACTCCCAAAGCAAAAGATGCATCTGGAAATGCCGGGGATGTGGACCAGGAAAGAAGAGATCCTCATAATCAGCCTGGCAATCATTTTCAGTTAGCTTCTTCAAACGCTTTGATGGAGCGACGGGTTCTCGACTTTAGTGAATGCGGAACACCAGGAAAGGAGAACAAATCTTCAGCTATGACCTTCTCTAGCCCCTCTTCATATTTGTTGAAAGGGTGTAGATAG 3120 0.4333 MEGDKTTPAPSDGLSDSVQKIRALHGRTSGPTRRSTKGQWTPEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPAINKEAWTQEEELALIRAHQIYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLIPQVGRPNQPMVSTSSRLLCSGDDSGQKGIGEEVSECSQESASASRPPIAQEMTKVVLHTREETRPTECSSLGKEQSPSQASCSDPYYIPLDDVTISNSDMAREEASSSQFTEQNYSHEPGKSAGMDNGSHLHALPGISSLDLGQEFSLLQGDCTVSDESHDVVNVQFHTSVGLGVATPVDPTSMDSSKPEDMLIAGEECCGILFSDAMNDGTFPSRDHNKGVDMVLSACTSNLFQSPEIQISDAGRTSAAFKTCPTRYNNLIESSCCQSFPIVPSSLSANDGRVVYTAEAAQLYGGDDQHIASSARDSFIYPNDSSISTCIDIIDSAELHDGPNIVNDALRLVPVNNFTCASDAQQTRNPMDEKTDVQTEQEDTGSLCYEPPRFPSLDIPFFSCDLIQHGGDMQQDFSPLGIRRLMMSSVNSPTPLMLWDSPSRDDSPDAFLRSAAKTFTGTPSILKKRRRDLLSPLSDKRIEKKHETDMTSTLTTHFSRLDVMFDDNEAQAANMLPPSSIQKNKNGTSDDDKENYRPALKGEHLEGKKESNILRCKESEKDTDENTRDADSKMETDVDATAAAEIVQQASGVLSEHDMNDLLLYSPDQIHFGSDSTHSSRAKTPKNLNNRSLEAVPNQNIPPKSFYVNPYTSDCSPSVRAKEHEISSARPSHCSSAPGENTGDHTRDDAGFETFNIFGGTPFRRSIESPSSWKSPWFINTFLPSPRIDTEITIEDFGYLMSPGDRSYDAIGWMKQVKEQTAAAYANAEEILEIDTPKAKDASGNAGDVDQERRDPHNQPGNHFQLASSNALMERRVLDFSECGTPGKENKSSAMTFSSPSSYLLKGCR 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0798 1039 CDD SANT 91 135 IPR001005 -
Prci2g0798 1039 Gene3D - 36 88 - -
Prci2g0798 1039 MobiDBLite consensus disorder prediction 716 741 - -
Prci2g0798 1039 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Prci2g0798 1039 MobiDBLite consensus disorder prediction 746 765 - -
Prci2g0798 1039 FunFam Transcriptional activator Myb isoform A 36 88 - -
Prci2g0798 1039 MobiDBLite consensus disorder prediction 299 319 - -
Prci2g0798 1039 FunFam Transcription factor MYB3R-2 142 206 - -
Prci2g0798 1039 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Prci2g0798 1039 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Prci2g0798 1039 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Prci2g0798 1039 Gene3D - 89 140 - -
Prci2g0798 1039 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Prci2g0798 1039 MobiDBLite consensus disorder prediction 205 284 - -
Prci2g0798 1039 MobiDBLite consensus disorder prediction 703 741 - -
Prci2g0798 1039 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Prci2g0798 1039 MobiDBLite consensus disorder prediction 231 247 - -
Prci2g0798 1039 SUPERFAMILY Homeodomain-like 33 89 IPR009057 -
Prci2g0798 1039 Gene3D - 142 199 - -
Prci2g0798 1039 MobiDBLite consensus disorder prediction 975 989 - -
Prci2g0798 1039 MobiDBLite consensus disorder prediction 1016 1033 - -
Prci2g0798 1039 MobiDBLite consensus disorder prediction 1 42 - -
Prci2g0798 1039 FunFam Transcriptional activator Myb isoform A 89 141 - -
Prci2g0798 1039 MobiDBLite consensus disorder prediction 1013 1039 - -
Prci2g0798 1039 CDD SANT 40 83 IPR001005 -
Prci2g0798 1039 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Prci2g0798 1039 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Prci2g0798 1039 MobiDBLite consensus disorder prediction 847 879 - -
Prci2g0798 1039 MobiDBLite consensus disorder prediction 269 283 - -
Prci2g0798 1039 MobiDBLite consensus disorder prediction 206 221 - -
Prci2g0798 1039 SMART sant 140 188 IPR001005 -
Prci2g0798 1039 SMART sant 88 137 IPR001005 -
Prci2g0798 1039 SMART sant 36 85 IPR001005 -
Prci2g0798 1039 CDD SANT 143 183 IPR001005 -
Prci2g0798 1039 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Prci2g0798 1039 PANTHER MYB PROTEIN-RELATED 37 110 - -
Prci2g0798 1039 MobiDBLite consensus disorder prediction 966 994 - -
Prci2g0798 1039 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0798 Prci-Chr2 6090815 6097548 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0798 9 1039 MYB Transcription Factor Family AT4G32730 42.871 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci2g0798 Myb_DNA-binding 3.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0798 - K09420 aprc:113848458 1272.69