Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0780 ATGCCCAAGATCGCTCTCGGAACCTCTCGGGAGGCTACCCAGCCCGACTGCCTTCAGGCCCTCGTCATCGAGTTCATTACCACCTTCCTCTTTGTCTTCGCCGGTGTCGGTTCTGCCATGGCTGCCGAAAAGCTAGGAGCAGACGCTTTGGTAGGGCTGTTTGCCGTGGCCATGGCACATGCACTTGTGGTCGCCACCATGATATCGGCTGGCCACATTTCCGGCGGCCACCTCAATCCAGCCGTGACGATCGGCCTCCTCGTGGGCGGCCACATCACCCTCTTCCGTTCCATCCTTTATTGGATCGATCAATTACTCGCATCGGCCCTTGCCTGTTATCTTCTTCACTACCTCTCCGGCGGACTGCCAACCCCGGTGCACACGCTGGCGAGTGGAGTGGGGTACGCTCAGGGAGTGCTATGGGAGGTCATCCTAACATTTTCATTGCTGTTCTCCGTGTATGCAACGATGGTGGATCCGAAAAAGGGAGCCATTGATGGGCATGGGCCCACCCTGGTTGGGTTTGTTGTGGGCGCTAATATCCTGGCCGGAGGGGCCTTCTCCGCCGCTTCTATGAACCCAGCAAGGTCCTTTGGGCCTGCTCTGGTCAGCGGCAATTGGGCCGATCATTGGGTTTACTGGGTCGGCCCACTCATTGGGGGTGCCTTTGCTGGCTTCATCTACGAGACCTTTTTCATCAACAGATCCCATGCCCTTCTTCCTCGAGATGAAGAAAACCGCTAG 744 0.5739 MPKIALGTSREATQPDCLQALVIEFITTFLFVFAGVGSAMAAEKLGADALVGLFAVAMAHALVVATMISAGHISGGHLNPAVTIGLLVGGHITLFRSILYWIDQLLASALACYLLHYLSGGLPTPVHTLASGVGYAQGVLWEVILTFSLLFSVYATMVDPKKGAIDGHGPTLVGFVVGANILAGGAFSAASMNPARSFGPALVSGNWADHWVYWVGPLIGGAFAGFIYETFFINRSHALLPRDEENR 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0780 247 ProSitePatterns MIP family signature. 77 85 IPR022357 -
Prci2g0780 247 FunFam Probable aquaporin TIP1-1 2 244 - -
Prci2g0780 247 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci2g0780 247 PRINTS Major intrinsic protein family signature 211 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci2g0780 247 PRINTS Major intrinsic protein family signature 59 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci2g0780 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci2g0780 247 PRINTS Major intrinsic protein family signature 141 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci2g0780 247 PRINTS Major intrinsic protein family signature 96 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci2g0780 247 Pfam Major intrinsic protein 12 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci2g0780 247 PANTHER AQUAPORIN-8 4 236 IPR034294 -
Prci2g0780 247 CDD MIP 19 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci2g0780 247 Gene3D Glycerol uptake facilitator protein. 2 242 IPR023271 -
Prci2g0780 247 SUPERFAMILY Aquaporin-like 11 241 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0780 Prci-Chr2 5938503 5939669 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0780 1 245 Major Intrinsic Protein MIP AT2G25810 75.102 1.27e-127 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0780 K09873 - gmx:100811447 423.32