Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0776 ATGAGTGTTGAACCCCAGAATTCTGAAGCAGAGAGCAGCTCAAACTCTTTCTCCTCTCCGCCAAATTCACCATCATCGCCCCCTTCAAGCAGGGCTCTTAAAAACCCTGTCTCACAGACTAAATCTCAGGACCCAGAGTCAACAAAGATAAAGCGCAATCGAGACTCCAATAAACATCCTGTGTATCGTGGGGTCCGGATGCGTAGTTGGGGCAAATGGGTTTCTGAAATTCGCGAGCCACGCAAGAAATCTCGCATATGGCTGGGTACATTCTCCACCCCTGAAATGGCCGCACGGGCACACGACGTCGCGGCCCTGAGCATCAAAGGGAATTCCGCCATTCTCAATTTCCCTCAACTAGCAAGCTCCCTGCCCCGCCCAGCATCTGTCTCTCCTCGCGATATTCAGGCTGCCGCAGCAAAAGCCGCTCAAATGGATCAGTTTGACTTGCCATCGTCATCATCGCCCTCGACATTGTCGTCATCATCTTCCACGACGTCGTTGGTTTCGGCAATGGAAATGTGCAGTGGTTCGGAGGAATTGAGCGAGATCATAGAGCTGCCAAGCTTGGAAAAAAGTGAGGAGACGTGCGAGTTAAGGCAGGAGTTTGTGCTCGTGGATTCCTTATCTGATGCGTGGACGTACCAGCCACCGTGGTTACAGGGCATGGAAGAATGTAATGGGTACGTTGCTGATCAGCTAGCAGTGCCTGCAGAGAGTGGAATCATAAATAACCTTAATAGTTTGCTCTGGAATTACTGA 762 0.5079 MSVEPQNSEAESSSNSFSSPPNSPSSPPSSRALKNPVSQTKSQDPESTKIKRNRDSNKHPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALSIKGNSAILNFPQLASSLPRPASVSPRDIQAAAAKAAQMDQFDLPSSSSPSTLSSSSSTTSLVSAMEMCSGSEELSEIIELPSLEKSEETCELRQEFVLVDSLSDAWTYQPPWLQGMEECNGYVADQLAVPAESGIINNLNSLLWNY 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0776 253 SUPERFAMILY DNA-binding domain 61 119 IPR016177 GO:0003677
Prci2g0776 253 MobiDBLite consensus disorder prediction 1 20 - -
Prci2g0776 253 FunFam Ethylene-responsive transcription factor 2 60 119 - -
Prci2g0776 253 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 38 197 - -
Prci2g0776 253 CDD AP2 62 118 IPR001471 GO:0003700|GO:0006355
Prci2g0776 253 MobiDBLite consensus disorder prediction 1 63 - -
Prci2g0776 253 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Prci2g0776 253 Gene3D AP2/ERF domain 61 119 IPR036955 GO:0003700|GO:0006355
Prci2g0776 253 SMART rav1_2 61 124 IPR001471 GO:0003700|GO:0006355
Prci2g0776 253 MobiDBLite consensus disorder prediction 28 44 - -
Prci2g0776 253 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Prci2g0776 253 PRINTS Ethylene responsive element binding protein signature 84 100 IPR001471 GO:0003700|GO:0006355
Prci2g0776 253 ProSiteProfiles AP2/ERF domain profile. 61 118 IPR001471 GO:0003700|GO:0006355
Prci2g0776 253 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0776 Prci-Chr2 5888027 5889033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0776 37 229 AP2-EREBP Transcription Factor Family AT5G11590 62.121 2.29e-66 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci2g0776 AP2 8.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0776 K09286 - qsa:O6P43_015497 274.248