Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0773 ATGGAAGCACCCGAGTATTTCCAGGGCAGCTTTTGCTCCCAATTCTCGTCCTCCGATGCCAAGACCGACCATTTCATCGTGGAGGACCTCCTCGACTTCTCCCACGACGACGCTATCATTGCCGACGTCCCTGCCTTCGACTCCCTTCCCACCGATTCCTCCATTCTAATTAACTCCATCGATAGCTCCAATTGCTCTCCCTTCTCCGGCTACGGCCCCGGTTTCACCCCAGACATTCCTTCTCGAAATTTACCCGACCCGTGCTTCTCCACCGACCTCTGCGTCCCGAGTAATGATATGGCGGAGCTGGAATGGCTCTCGAACATCGCGGAGGAATCATTCTCGAGCGAGGACCTGCAGAAACTGGAGCTGATATCGGGCATGAAAGCCCGAAACGAAGAATCATCAGAAAGCCGTGAATTGCAGCACCACGAAGAAACCAGCCGGGAAAACGTCATATTCAACCGCCAAGTCTCGGTTCCGGCGAAGGCTCGCAGCAAGAGATCCCGCGGGCCCCCATGCAACTGGACGTCTCGCCTCCTCGTTCTTTCTCCCACATCATCCTCTTCCGAACCCACGTTGTTTCCCACCCAGCCAGGAAAGAAGCCGGGAAAGTCGGGAACCAGGAAAAAGGAGAACGGCGATGACGGGGAGGGGCGGAAATGCCTACATTGCGCGACAGATAAGACGCCGCAGTGGAGGACGGGACCGATGGGCCCGAAAACGCTGTGCAATGCTTGTGGGGTGAGGTACAAGTCGGGGAGGTTGGTGCCGGAGTACAGGCCTGCGGCGAGTCCGACGTTCGTGCTGACCAAGCACTCGAACTCGCACCGGAAGGTGCTGGAGCTCCGAAGACAGAAGGAGATGATGGGCGCCCACCAGCAGCAGCAGCGGCAGCTGTTTCTGCGACATCAAAACATGGTGTTCGATGTGTCCAACGGCGACGATTACTCGATCAACCAACAGGTGGGCCCCGATATCAGGCAGCTCATCTAG 996 0.5723 MEAPEYFQGSFCSQFSSSDAKTDHFIVEDLLDFSHDDAIIADVPAFDSLPTDSSILINSIDSSNCSPFSGYGPGFTPDIPSRNLPDPCFSTDLCVPSNDMAELEWLSNIAEESFSSEDLQKLELISGMKARNEESSESRELQHHEETSRENVIFNRQVSVPAKARSKRSRGPPCNWTSRLLVLSPTSSSSEPTLSXPTQPGKKPGKSGTRKKENGDDGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKEMMGAHQQQQRQLFLRHQNMVFDVSNGDDYSINQQVGPDIRQLI 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0773 332 PANTHER GATA TRANSCRIPTION FACTOR 16 299 - -
Prci2g0773 332 CDD ZnF_GATA 222 269 IPR000679 GO:0006355|GO:0043565
Prci2g0773 332 MobiDBLite consensus disorder prediction 127 151 - -
Prci2g0773 332 ProSiteProfiles GATA-type zinc finger domain profile. 217 253 IPR000679 GO:0006355|GO:0043565
Prci2g0773 332 Gene3D - 217 267 IPR013088 GO:0006355|GO:0008270
Prci2g0773 332 MobiDBLite consensus disorder prediction 206 223 - -
Prci2g0773 332 MobiDBLite consensus disorder prediction 127 223 - -
Prci2g0773 332 Pfam GATA zinc finger 223 256 IPR000679 GO:0006355|GO:0043565
Prci2g0773 332 PIRSF Txn_fac_GATA_plant 9 312 IPR016679 GO:0003677|GO:0005634|GO:0045893
Prci2g0773 332 FunFam GATA transcription factor 212 300 - -
Prci2g0773 332 ProSitePatterns GATA-type zinc finger domain. 223 248 IPR000679 GO:0006355|GO:0043565
Prci2g0773 332 MobiDBLite consensus disorder prediction 179 202 - -
Prci2g0773 332 SMART GATA_3 217 267 IPR000679 GO:0006355|GO:0043565
Prci2g0773 332 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 218 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0773 Prci-Chr2 5821711 5823585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0773 22 332 C2C2-Gata Transcription Factor Family AT5G25830 52.819 4.86e-93 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Prci2g0773 GATA 3e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0773 - - qsa:O6P43_015488 404.445