Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0770 ATGGCTCATCAAGCTGAGTCTAAGTGGTGCATCATGTTTATGCGTGTCTTCATAGTGATGACGATGAGCTTTGTGGCGTCCCATGGGGAAGTAGAGGAAGAGCTTCTGTTATCGTTCAAGGCTGCCATTAACGATCCATTTCACTATCTCTCAAACTGGGTCGACTCCTCTTCCACTAGTATCTGCAACTGGTACGGTATCACCTGCGACAGTGACTCCCACGTTGGCGCCATCAACCTCTCCGCCAAAAACATCTCCTCCAATAATATTTCCTCCTTCTCCTCCATATTTCAACTTCCACACGTTGAACACATCGACCTCTCCGATAATCAGCTATCTGGGGGAATCTCTTTCTCTCCCTCTTCGCTTGTCTACCTAAATCTTAGCAACAACAATTTCACGGGTCCTGTCCCATTGTCGTTTTCCCGCATCCAAACTCTGGATCTCTCGAACAACATGTTTTCCGGGGAAATATCTCATCAAATTGGATCGCTTGCGAGTCTGAGGTATGTTGATCTGGGAGGGAACCTTTTGGTGGGAAAGATTCCAGATTCTATCACCAACATGACAGGTTTAGAGTACTTGACCTTGGCTTCCAACCACCTCGTGGGTTTAATCCCTCCAAAAATAGGCTTTATGAAGAGCTTGAAGTGGATTTATTTCGGTTACAACAATCTCTCGGGTGGGATTCCAGAGGGAATTGGAGAACTGAAGAATTTAAATCATCTTGATCTTGTATACAACAACCTCACGGGACGGATTCCCGATTCTCTTGGAAACCTCACTGATCTTGAGTATCTTTTTCTCTACCAAAACAAGCTGACGGGTCGGATTCCCTTGTCCATTTTTGAGCTTAAAAAGCTTATTTCGCTGGATCTCAGTGATAATTTTCTGTCTGGTGAGATTCCCGAGCTCGTAATTCAGCTTCAGAGATTAGAAATTCTTCACCTTTTCTCCAACAACTTGATCGGCAAGATTCCAAAGGCTATATCTTCTCTGCCTCGCCTCCAAGTCCTTCAGCTATGGTCTAACGGATTAACGGGTGAGATTCCAGAAGATTTGGGAAGGCATAACAACCTCACTATTCTGGACGTTTCCACGAACAAACTTTCTGGGAAAATCCCAGATAGTTTATGCCGCTCGGGCGCTCTTTACAAGCTTATCCTTTTCTCCAACTCCCTTCAAGGGGAAATACCAAGTAGCTTAACCTCTTGCACAAGCTTACGCCGAGTTCGTCTTCAGAACAACAAATTCTCAGGTGAATTGCCGTCCCAACTAACTCAACTATCACAGGTATATTTATTGGACATCTCCGGTAACCAACTCTCCGGCAGGATTGATAATAGGCACTGGAATATGCCATCGCTTCAAATGTTGAATTTGGGTGACAACAATTTCTCTGGTGAGTTGCCGACCACTTTTGGTAGCAGAAAATTGGAGAAACTGGACTTATCTGAAAATAGATTTTCTGGTTATATTCCACGTGGGTTTGGAAGCTTATCGGAGCTGATGCAACTGAAGCTGAGTTATAACGAGCTATATGGTGAAATCCCAGGAGAGCTCACTCTCTGTAGGAAGCTAGTGCTTTTAGATGTCAGCCACAATCAGCTCACTGGTCAAATTCCGATGAGTCTGGGCCAGATGCCGGTTCTGAGCTTACTGGATTTGTCGGATAACCAATTGTGGGGTGAAATTCCAGATAATTTAGGCAGAGTGGAATCTCTGGTGCAGGTAAACATATCCCACAACCACTTTCACGGACATTTACCGGCCACCGGAGCTTTCCTTGCCATAAATGCAAGCGCAGTCACTGGTAACGACCTATGTGGTGGTTCCAGTGGTGCTTCAAGCGGGTTACCACCGTGCAGAAAAAGAGACAAGAATCCATGGTTTGTCGCGCTGTTGCTTGTGGTGGGATTTTCGGGGTTTGCATTAGCAGCTTTTATCGTTACATGCTCACGAAGAAGAAAGAGTTTGGAGCTGAGGAGAGTGGAAAGCGAAGATGGTACCTGGGAGATTCAATTTTTCGATTGCAAGTTCGCCGAAGTGATCACCATGGACGATGTTTTATCGTCAGCGCAAGCAGGGAACGTGATCTCCAAAGGGAAGAACTGGGTTTCATACGAAGGGAAGTGCATGGCAAGTGGCATGCAATTCGAGGTGAAAGAAATCAGAGACTTTAATTCAGTTCCGTCGAGCTTCTGGGAAGACGTAGTGGAATTGGGTAAGGTGCGGCATCCAAACATTTTGAAATTGATGGGAGTGTGTCATTCGGGTAAAGGAGCATTTTTGTTGTGCGAGCATGCACAGGGAAACAGTTTAAGTGAAGTCGTGAGGCATTTGGATTGGGAAAGACGACGGAAAATTGCCGTTGGGATCGCAAAAGCACTCAAGTTTCTGCACGCTCGTTGCCCGGTTATCTTGGTTGGTGACATGTCACCGGAAAGCGTTTTAGTGGACGGCAATGACATTCCTCGTTTGAAGTTGAACCCTCCGGCATTGCTGAAGGGTTTCATTTCCTCCGCTTACGTTGCCCCAGAAGCAAGGGAAGGGAAGGAAGTGACAGAGAAGAGCGACATGTATGGATTCGGTGCCATGTTGATGGAAATGGTGACGGGAAGAAGTGCCGGGGAGGGAGGAGAGGGGATGGTGGAATGGGCCCGGTTCTGCTATTCGGAATGTCAATGCGAAACGTGGGTCGGCCCGAGAATGAAGGGAGGGATGCAAAACGACGTCGTGGAGATCATGAACCTTGCTCAGCACTGCACCGCCATGGATCCGATAGCGAGGCCATGCGCAAGCGACGTCGTCAGAGCCCTATCAGCTGTTTCCTGCACAGGCGCTGTTCTCTCTGCTTTTGCACTAGTCTGA 2871 0.4699 MAHQAESKWCIMFMRVFIVMTMSFVASHGEVEEELLLSFKAAINDPFHYLSNWVDSSSTSICNWYGITCDSDSHVGAINLSAKNISSNNISSFSSIFQLPHVEHIDLSDNQLSGGISFSPSSLVYLNLSNNNFTGPVPLSFSRIQTLDLSNNMFSGEISHQIGSLASLRYVDLGGNLLVGKIPDSITNMTGLEYLTLASNHLVGLIPPKIGFMKSLKWIYFGYNNLSGGIPEGIGELKNLNHLDLVYNNLTGRIPDSLGNLTDLEYLFLYQNKLTGRIPLSIFELKKLISLDLSDNFLSGEIPELVIQLQRLEILHLFSNNLIGKIPKAISSLPRLQVLQLWSNGLTGEIPEDLGRHNNLTILDVSTNKLSGKIPDSLCRSGALYKLILFSNSLQGEIPSSLTSCTSLRRVRLQNNKFSGELPSQLTQLSQVYLLDISGNQLSGRIDNRHWNMPSLQMLNLGDNNFSGELPTTFGSRKLEKLDLSENRFSGYIPRGFGSLSELMQLKLSYNELYGEIPGELTLCRKLVLLDVSHNQLTGQIPMSLGQMPVLSLLDLSDNQLWGEIPDNLGRVESLVQVNISHNHFHGHLPATGAFLAINASAVTGNDLCGGSSGASSGLPPCRKRDKNPWFVALLLVVGFSGFALAAFIVTCSRRRKSLELRRVESEDGTWEIQFFDCKFAEVITMDDVLSSAQAGNVISKGKNWVSYEGKCMASGMQFEVKEIRDFNSVPSSFWEDVVELGKVRHPNILKLMGVCHSGKGAFLLCEHAQGNSLSEVVRHLDWERRRKIAVGIAKALKFLHARCPVILVGDMSPESVLVDGNDIPRLKLNPPALLKGFISSAYVAPEAREGKEVTEKSDMYGFGAMLMEMVTGRSAGEGGEGMVEWARFCYSECQCETWVGPRMKGGMQNDVVEIMNLAQHCTAMDPIARPCASDVVRALSAVSCTGAVLSAFALV 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0770 956 PANTHER OS04G0122200 PROTEIN 82 184 - -
Prci2g0770 956 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 657 768 - -
Prci2g0770 956 ProSiteProfiles Protein kinase domain profile. 693 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0770 956 Pfam Protein kinase domain 707 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0770 956 Gene3D Ribonuclease Inhibitor 206 306 IPR032675 -
Prci2g0770 956 SMART LRR_typ_2 548 572 IPR003591 -
Prci2g0770 956 SMART LRR_typ_2 285 309 IPR003591 -
Prci2g0770 956 SMART LRR_typ_2 165 189 IPR003591 -
Prci2g0770 956 SMART LRR_typ_2 333 357 IPR003591 -
Prci2g0770 956 SMART LRR_typ_2 237 261 IPR003591 -
Prci2g0770 956 SMART LRR_typ_2 500 524 IPR003591 -
Prci2g0770 956 SMART LRR_typ_2 99 126 IPR003591 -
Prci2g0770 956 SMART LRR_typ_2 453 476 IPR003591 -
Prci2g0770 956 FunFam Leucine-rich repeat receptor protein kinase EMS1 116 207 - -
Prci2g0770 956 Gene3D Ribonuclease Inhibitor 25 117 IPR032675 -
Prci2g0770 956 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Prci2g0770 956 SUPERFAMILY Protein kinase-like (PK-like) 682 941 IPR011009 -
Prci2g0770 956 Gene3D Transferase(Phosphotransferase) domain 1 770 948 - -
Prci2g0770 956 Gene3D Ribonuclease Inhibitor 118 205 IPR032675 -
Prci2g0770 956 Gene3D Phosphorylase Kinase; domain 1 662 768 - -
Prci2g0770 956 SUPERFAMILY L domain-like 303 597 - -
Prci2g0770 956 Gene3D Ribonuclease Inhibitor 378 617 IPR032675 -
Prci2g0770 956 FunFam Leucine-rich receptor-like protein kinase family protein 208 304 - -
Prci2g0770 956 Pfam Leucine rich repeat 477 537 IPR001611 GO:0005515
Prci2g0770 956 Pfam Leucine rich repeat 191 250 IPR001611 GO:0005515
Prci2g0770 956 SUPERFAMILY RNI-like 78 371 - -
Prci2g0770 956 Gene3D Ribonuclease Inhibitor 307 377 IPR032675 -
Prci2g0770 956 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 315 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0770 Prci-Chr2 5777339 5780974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0770 13 940 Receptor kinase-like Gene Family AT2G25790 51.518 0.0 905
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Prci2g0770 Pkinase 9.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0770 - - gmx:100777118 1198.34