Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0725 ATGGATCGCCAATCCATCTTCTTTCTTTTCGGACTCCTATTTTCCTTCTCTCTTGCATCACAAGCCATCAGTGACGGACAATTACAGTTTTTTTCTCTAATGAAGAACTCCCTCTCGGGGAAATACCCGCTAAATTGGGACGTCACAGGAGGAAAACCTGCCTGTAACTTCACTGGAGTAATCTGCAACAACCAAGGGGAAGTAACCAATCTTGACATCTCCGGTTGGTCACTTTCTGGAAATTTCCCTTCAGATATATGCTCCTATCTGCCAGAGTTGCGTTTTCTACGTCTCGGCCACAATCGTTTGAGAGGAAAATTCCTTGATAGCGTCATCAACTGTTCTCACTTAGAAGAGCTTAACATGAATCACGTGTACCATACAGGAACCCTTCCAGATTTCTCACCTATGAAATCTCTAAGGATCCTGGATTTGTCATACAACTCCTTCACAGGTCAGTTTCCCATGTCGGTATTTAATCTTACCAATCTTGAGGTGCTTAACTTCAATGAGAACCCCGGTTTCAACTTATGGGAGCTGCCAGAAGACATCTATAGGATGAGAAAACTCAAATCTATGATCTTGACGACATGCATGGTGCGTGGCGGAATCCCTGCATCCATAGGAAACGTTTTAACTCTGGTTGATCTTGAATTGAGTGGGAATTTCCTCACGGGTAAGATTCCTACAGAGCTTGGGATGCTGAAAAACTTGCAGCAACTTGAGCTTTACTATAACCAACTTATTGGCAATATACCAAAGGAGCTAGGAAATCTCACGGAGCTCAGAGACTTGGACATGTCAGTCAATAAGCTGTCGGGAAGTATTCCAGAATCTGTATGTCGTCTTCCCAAGCTTGAAGTCTTGCAGCTATACAACAATAGTCTCACAGGAGAAATCCCAGGTGTGATAGCAAACTCAAAAACCTTAAGAATATTATCTCTTTATGACAATTTTTTGACCGGAGAAGTCCCAAGAAATCTGGGTCAGTTTTCAGGAATGGTAGTTCTTGATTTATCCGAGAACAGACTGTCTGGTCCATTGCCAACAGAGGTTTGCAATGGAGGTAAACTGATGTACTTCCTTGTTCTGGATAATATGTTTTCTGGAGAGCTACCAGAGAGTTATGCAAAGTGCTGGACAATGTTGAGGTTTCGAGTCAGCAATAACCATTTGGTGGGCTCAATTCCCGAGGGACTCCTTGGTCTGCCGCACGTTTCCATAATTGATTTGAGTAACAATAATTTAAGTGGTCCAATTTCGGAGACTATTGGAAATCCTAGAAACTTGTCAGAACTATTCATACAGAAGAATAGGATCTCAGGCGTTATACCGCCTACCATCTCTCGAGCCACCAATCTTGTCAAGATTGATTTCAGTAACAACCTTTTGTCCGGTCCAATACCTTTCGAAATCGGTAATCTTAAAAAGCTTAATTTGCTGATGTTGCAAGGGAATAAGCTGAATTCCTCCATCCCCGGCTCACTGTCCTTATTAAAGTCCCTCAACGTTCTTGATCTCTCCAACAACCTTTTGACCGGTAGCATCCCTGAAAGTTTTTCTGATCTGCTACCGAACTCTATCAACTTTTCAAATAACTTGCTCTCTGGTCCAATTCCTCCATCGCTGATAAAAGGAGGTTTAGTCGAAAGCTTCTCAGGGAATCCTGGTCTGTGCGTTTCACCCGTCTATGCCAACTCATCGGATCAAAGTTTTCCCACATGCTCAAAGACTGGCAACAAGAAGAGGCTAAGCACTTTCTGGGTAGCAGGGACTTCAGTGGTTTTGATCATAACTGGAGCAGCCTTGTTTCTGAAAAGAAGGTGTAGCAAAGAGAGAGCTGCGGTGGAACATGACGAAACATGGCCATTCTTCTCTTGTGAAGTGAAGAACTTTCACAGAATTACAATTGACCAACGGGAGATCGTCGAGGCCATGGTCGAAAAGAATAGAGTGGGGCATGGAGGGTCTGGGATAGTGTACAAGATCGGGTTAAAAAGCGGTGAATTTGTTGCTGTGAAGCGGCTATGGAGTCGAAAGTTAAAGGATTCTGTTCCAGATCAGGATGGTTTAGCTTTAGACAAGACGTTGAAAACTGAGGTGGAGACCCTGGGAAATATAAGGCACAAGAACATAGTCAAGCTGTACTGCTACTTCTCGAGTTTGGATTGCAGCTTGTTAGTTTATGAGTACATGCCAAATGGTAATCTCTGGGATGCTCTGCACAAAGGTTCGGTCCATTTGGATTGGCCTACTCGCCATAAGATTGCCCTGGGGACAGCACAGGGTCTGGCATACCTCCACCATGATTTGCTCCCTCCTATAATTCATCGAGACGTCAAGTCAACTAACATCCTTCTCGACGTTGATTACCAACCCAAGGTTGCGGATTTCGGGATTGCCAAGGTATTGCAAGCAAGAGGAGGGAAGGACTCCACATCTACCGTTGTTGCGGGAACATATGGTTACTTGGCACCAGAATATGCTTATTCTTCCAGAGCAACTACCAAGTGTGATGTCTATAGTTTTGGGGTCATTTTAATGGAACTGATAACTGGGAAGAAGCCTGTGGAGGCAGAATTTGGAGAGAACAGAAACATCGTATATTGGGTTTCAAATACGGTCGACAGCAAGGAAGGGGCTAGTGAGGTATTAGACAAGCGATTAGAAGGGTCTTACAAAGAGGAAATGATTCAGGTGCTCCGAATTGCCATCCGTTGCACCTACAAGGCTCAAGCTCGTCGACCGACCATGAAAGAGGTAGTTCAAGTGTTGATTAAGGCAGACCCGTCTAGCAAGTTGTCCAATAAGACCAAAGAAACATCAAATGCCACTTTGACAAAGAACTCATCATTTGAACTGTAG 2865 0.4391 MDRQSIFFLFGLLFSFSLASQAISDGQLQFFSLMKNSLSGKYPLNWDVTGGKPACNFTGVICNNQGEVTNLDISGWSLSGNFPSDICSYLPELRFLRLGHNRLRGKFLDSVINCSHLEELNMNHVYHTGTLPDFSPMKSLRILDLSYNSFTGQFPMSVFNLTNLEVLNFNENPGFNLWELPEDIYRMRKLKSMILTTCMVRGGIPASIGNVLTLVDLELSGNFLTGKIPTELGMLKNLQQLELYYNQLIGNIPKELGNLTELRDLDMSVNKLSGSIPESVCRLPKLEVLQLYNNSLTGEIPGVIANSKTLRILSLYDNFLTGEVPRNLGQFSGMVVLDLSENRLSGPLPTEVCNGGKLMYFLVLDNMFSGELPESYAKCWTMLRFRVSNNHLVGSIPEGLLGLPHVSIIDLSNNNLSGPISETIGNPRNLSELFIQKNRISGVIPPTISRATNLVKIDFSNNLLSGPIPFEIGNLKKLNLLMLQGNKLNSSIPGSLSLLKSLNVLDLSNNLLTGSIPESFSDLLPNSINFSNNLLSGPIPPSLIKGGLVESFSGNPGLCVSPVYANSSDQSFPTCSKTGNKKRLSTFWVAGTSVVLIITGAALFLKRRCSKERAAVEHDETWPFFSCEVKNFHRITIDQREIVEAMVEKNRVGHGGSGIVYKIGLKSGEFVAVKRLWSRKLKDSVPDQDGLALDKTLKTEVETLGNIRHKNIVKLYCYFSSLDCSLLVYEYMPNGNLWDALHKGSVHLDWPTRHKIALGTAQGLAYLHHDLLPPIIHRDVKSTNILLDVDYQPKVADFGIAKVLQARGGKDSTSTVVAGTYGYLAPEYAYSSRATTKCDVYSFGVILMELITGKKPVEAEFGENRNIVYWVSNTVDSKEGASEVLDKRLEGSYKEEMIQVLRIAIRCTYKAQARRPTMKEVVQVLIKADPSSKLSNKTKETSNATLTKNSSFEL 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0725 954 Gene3D Phosphorylase Kinase; domain 1 629 731 - -
Prci2g0725 954 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 179 927 - -
Prci2g0725 954 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 732 943 - -
Prci2g0725 954 ProSitePatterns Protein kinases ATP-binding region signature. 652 674 IPR017441 GO:0005524
Prci2g0725 954 FunFam Leucine-rich repeat receptor-like protein kinase 178 279 - -
Prci2g0725 954 MobiDBLite consensus disorder prediction 933 954 - -
Prci2g0725 954 SMART LRR_typ_2 235 259 IPR003591 -
Prci2g0725 954 SMART LRR_typ_2 331 355 IPR003591 -
Prci2g0725 954 SMART LRR_typ_2 403 427 IPR003591 -
Prci2g0725 954 SMART LRR_typ_2 499 522 IPR003591 -
Prci2g0725 954 SMART LRR_typ_2 161 187 IPR003591 -
Prci2g0725 954 SMART LRR_typ_2 90 115 IPR003591 -
Prci2g0725 954 SMART LRR_typ_2 475 498 IPR003591 -
Prci2g0725 954 SMART LRR_typ_2 283 306 IPR003591 -
Prci2g0725 954 Pfam Protein kinase domain 648 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0725 954 ProSiteProfiles Protein kinase domain profile. 646 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0725 954 FunFam Receptor protein-tyrosine kinase CEPR1 283 569 - -
Prci2g0725 954 SUPERFAMILY RNI-like 27 368 - -
Prci2g0725 954 SUPERFAMILY Protein kinase-like (PK-like) 635 925 IPR011009 -
Prci2g0725 954 SMART serkin_6 646 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0725 954 Gene3D Ribonuclease Inhibitor 29 175 IPR032675 -
Prci2g0725 954 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 25 177 - -
Prci2g0725 954 Gene3D Transferase(Phosphotransferase) domain 1 732 952 - -
Prci2g0725 954 Pfam Leucine Rich Repeat 502 522 IPR001611 GO:0005515
Prci2g0725 954 FunFam receptor protein-tyrosine kinase CEPR1 629 731 - -
Prci2g0725 954 Gene3D Ribonuclease Inhibitor 291 570 IPR032675 -
Prci2g0725 954 PRINTS Leucine-rich repeat signature 499 512 - -
Prci2g0725 954 PRINTS Leucine-rich repeat signature 334 347 - -
Prci2g0725 954 Gene3D Ribonuclease Inhibitor 176 290 IPR032675 -
Prci2g0725 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 775 787 IPR008271 GO:0004672|GO:0006468
Prci2g0725 954 SUPERFAMILY L domain-like 283 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0725 Prci-Chr2 5476619 5480518 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0725 24 941 Receptor kinase-like Gene Family AT5G49660 66.273 0.0 1231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci2g0725 Pkinase 5.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0725 - - qsa:O6P43_015448 1433.31