Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci2g0725 | ATGGATCGCCAATCCATCTTCTTTCTTTTCGGACTCCTATTTTCCTTCTCTCTTGCATCACAAGCCATCAGTGACGGACAATTACAGTTTTTTTCTCTAATGAAGAACTCCCTCTCGGGGAAATACCCGCTAAATTGGGACGTCACAGGAGGAAAACCTGCCTGTAACTTCACTGGAGTAATCTGCAACAACCAAGGGGAAGTAACCAATCTTGACATCTCCGGTTGGTCACTTTCTGGAAATTTCCCTTCAGATATATGCTCCTATCTGCCAGAGTTGCGTTTTCTACGTCTCGGCCACAATCGTTTGAGAGGAAAATTCCTTGATAGCGTCATCAACTGTTCTCACTTAGAAGAGCTTAACATGAATCACGTGTACCATACAGGAACCCTTCCAGATTTCTCACCTATGAAATCTCTAAGGATCCTGGATTTGTCATACAACTCCTTCACAGGTCAGTTTCCCATGTCGGTATTTAATCTTACCAATCTTGAGGTGCTTAACTTCAATGAGAACCCCGGTTTCAACTTATGGGAGCTGCCAGAAGACATCTATAGGATGAGAAAACTCAAATCTATGATCTTGACGACATGCATGGTGCGTGGCGGAATCCCTGCATCCATAGGAAACGTTTTAACTCTGGTTGATCTTGAATTGAGTGGGAATTTCCTCACGGGTAAGATTCCTACAGAGCTTGGGATGCTGAAAAACTTGCAGCAACTTGAGCTTTACTATAACCAACTTATTGGCAATATACCAAAGGAGCTAGGAAATCTCACGGAGCTCAGAGACTTGGACATGTCAGTCAATAAGCTGTCGGGAAGTATTCCAGAATCTGTATGTCGTCTTCCCAAGCTTGAAGTCTTGCAGCTATACAACAATAGTCTCACAGGAGAAATCCCAGGTGTGATAGCAAACTCAAAAACCTTAAGAATATTATCTCTTTATGACAATTTTTTGACCGGAGAAGTCCCAAGAAATCTGGGTCAGTTTTCAGGAATGGTAGTTCTTGATTTATCCGAGAACAGACTGTCTGGTCCATTGCCAACAGAGGTTTGCAATGGAGGTAAACTGATGTACTTCCTTGTTCTGGATAATATGTTTTCTGGAGAGCTACCAGAGAGTTATGCAAAGTGCTGGACAATGTTGAGGTTTCGAGTCAGCAATAACCATTTGGTGGGCTCAATTCCCGAGGGACTCCTTGGTCTGCCGCACGTTTCCATAATTGATTTGAGTAACAATAATTTAAGTGGTCCAATTTCGGAGACTATTGGAAATCCTAGAAACTTGTCAGAACTATTCATACAGAAGAATAGGATCTCAGGCGTTATACCGCCTACCATCTCTCGAGCCACCAATCTTGTCAAGATTGATTTCAGTAACAACCTTTTGTCCGGTCCAATACCTTTCGAAATCGGTAATCTTAAAAAGCTTAATTTGCTGATGTTGCAAGGGAATAAGCTGAATTCCTCCATCCCCGGCTCACTGTCCTTATTAAAGTCCCTCAACGTTCTTGATCTCTCCAACAACCTTTTGACCGGTAGCATCCCTGAAAGTTTTTCTGATCTGCTACCGAACTCTATCAACTTTTCAAATAACTTGCTCTCTGGTCCAATTCCTCCATCGCTGATAAAAGGAGGTTTAGTCGAAAGCTTCTCAGGGAATCCTGGTCTGTGCGTTTCACCCGTCTATGCCAACTCATCGGATCAAAGTTTTCCCACATGCTCAAAGACTGGCAACAAGAAGAGGCTAAGCACTTTCTGGGTAGCAGGGACTTCAGTGGTTTTGATCATAACTGGAGCAGCCTTGTTTCTGAAAAGAAGGTGTAGCAAAGAGAGAGCTGCGGTGGAACATGACGAAACATGGCCATTCTTCTCTTGTGAAGTGAAGAACTTTCACAGAATTACAATTGACCAACGGGAGATCGTCGAGGCCATGGTCGAAAAGAATAGAGTGGGGCATGGAGGGTCTGGGATAGTGTACAAGATCGGGTTAAAAAGCGGTGAATTTGTTGCTGTGAAGCGGCTATGGAGTCGAAAGTTAAAGGATTCTGTTCCAGATCAGGATGGTTTAGCTTTAGACAAGACGTTGAAAACTGAGGTGGAGACCCTGGGAAATATAAGGCACAAGAACATAGTCAAGCTGTACTGCTACTTCTCGAGTTTGGATTGCAGCTTGTTAGTTTATGAGTACATGCCAAATGGTAATCTCTGGGATGCTCTGCACAAAGGTTCGGTCCATTTGGATTGGCCTACTCGCCATAAGATTGCCCTGGGGACAGCACAGGGTCTGGCATACCTCCACCATGATTTGCTCCCTCCTATAATTCATCGAGACGTCAAGTCAACTAACATCCTTCTCGACGTTGATTACCAACCCAAGGTTGCGGATTTCGGGATTGCCAAGGTATTGCAAGCAAGAGGAGGGAAGGACTCCACATCTACCGTTGTTGCGGGAACATATGGTTACTTGGCACCAGAATATGCTTATTCTTCCAGAGCAACTACCAAGTGTGATGTCTATAGTTTTGGGGTCATTTTAATGGAACTGATAACTGGGAAGAAGCCTGTGGAGGCAGAATTTGGAGAGAACAGAAACATCGTATATTGGGTTTCAAATACGGTCGACAGCAAGGAAGGGGCTAGTGAGGTATTAGACAAGCGATTAGAAGGGTCTTACAAAGAGGAAATGATTCAGGTGCTCCGAATTGCCATCCGTTGCACCTACAAGGCTCAAGCTCGTCGACCGACCATGAAAGAGGTAGTTCAAGTGTTGATTAAGGCAGACCCGTCTAGCAAGTTGTCCAATAAGACCAAAGAAACATCAAATGCCACTTTGACAAAGAACTCATCATTTGAACTGTAG | 2865 | 0.4391 | MDRQSIFFLFGLLFSFSLASQAISDGQLQFFSLMKNSLSGKYPLNWDVTGGKPACNFTGVICNNQGEVTNLDISGWSLSGNFPSDICSYLPELRFLRLGHNRLRGKFLDSVINCSHLEELNMNHVYHTGTLPDFSPMKSLRILDLSYNSFTGQFPMSVFNLTNLEVLNFNENPGFNLWELPEDIYRMRKLKSMILTTCMVRGGIPASIGNVLTLVDLELSGNFLTGKIPTELGMLKNLQQLELYYNQLIGNIPKELGNLTELRDLDMSVNKLSGSIPESVCRLPKLEVLQLYNNSLTGEIPGVIANSKTLRILSLYDNFLTGEVPRNLGQFSGMVVLDLSENRLSGPLPTEVCNGGKLMYFLVLDNMFSGELPESYAKCWTMLRFRVSNNHLVGSIPEGLLGLPHVSIIDLSNNNLSGPISETIGNPRNLSELFIQKNRISGVIPPTISRATNLVKIDFSNNLLSGPIPFEIGNLKKLNLLMLQGNKLNSSIPGSLSLLKSLNVLDLSNNLLTGSIPESFSDLLPNSINFSNNLLSGPIPPSLIKGGLVESFSGNPGLCVSPVYANSSDQSFPTCSKTGNKKRLSTFWVAGTSVVLIITGAALFLKRRCSKERAAVEHDETWPFFSCEVKNFHRITIDQREIVEAMVEKNRVGHGGSGIVYKIGLKSGEFVAVKRLWSRKLKDSVPDQDGLALDKTLKTEVETLGNIRHKNIVKLYCYFSSLDCSLLVYEYMPNGNLWDALHKGSVHLDWPTRHKIALGTAQGLAYLHHDLLPPIIHRDVKSTNILLDVDYQPKVADFGIAKVLQARGGKDSTSTVVAGTYGYLAPEYAYSSRATTKCDVYSFGVILMELITGKKPVEAEFGENRNIVYWVSNTVDSKEGASEVLDKRLEGSYKEEMIQVLRIAIRCTYKAQARRPTMKEVVQVLIKADPSSKLSNKTKETSNATLTKNSSFEL | 954 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci2g0725 | 954 | Gene3D | Phosphorylase Kinase; domain 1 | 629 | 731 | - | - | |
Prci2g0725 | 954 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 179 | 927 | - | - | |
Prci2g0725 | 954 | FunFam | LRR receptor-like serine/threonine-protein kinase RCH1 | 732 | 943 | - | - | |
Prci2g0725 | 954 | ProSitePatterns | Protein kinases ATP-binding region signature. | 652 | 674 | IPR017441 | GO:0005524 | |
Prci2g0725 | 954 | FunFam | Leucine-rich repeat receptor-like protein kinase | 178 | 279 | - | - | |
Prci2g0725 | 954 | MobiDBLite | consensus disorder prediction | 933 | 954 | - | - | |
Prci2g0725 | 954 | SMART | LRR_typ_2 | 235 | 259 | IPR003591 | - | |
Prci2g0725 | 954 | SMART | LRR_typ_2 | 331 | 355 | IPR003591 | - | |
Prci2g0725 | 954 | SMART | LRR_typ_2 | 403 | 427 | IPR003591 | - | |
Prci2g0725 | 954 | SMART | LRR_typ_2 | 499 | 522 | IPR003591 | - | |
Prci2g0725 | 954 | SMART | LRR_typ_2 | 161 | 187 | IPR003591 | - | |
Prci2g0725 | 954 | SMART | LRR_typ_2 | 90 | 115 | IPR003591 | - | |
Prci2g0725 | 954 | SMART | LRR_typ_2 | 475 | 498 | IPR003591 | - | |
Prci2g0725 | 954 | SMART | LRR_typ_2 | 283 | 306 | IPR003591 | - | |
Prci2g0725 | 954 | Pfam | Protein kinase domain | 648 | 923 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g0725 | 954 | ProSiteProfiles | Protein kinase domain profile. | 646 | 946 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g0725 | 954 | FunFam | Receptor protein-tyrosine kinase CEPR1 | 283 | 569 | - | - | |
Prci2g0725 | 954 | SUPERFAMILY | RNI-like | 27 | 368 | - | - | |
Prci2g0725 | 954 | SUPERFAMILY | Protein kinase-like (PK-like) | 635 | 925 | IPR011009 | - | |
Prci2g0725 | 954 | SMART | serkin_6 | 646 | 932 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g0725 | 954 | Gene3D | Ribonuclease Inhibitor | 29 | 175 | IPR032675 | - | |
Prci2g0725 | 954 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 | 25 | 177 | - | - | |
Prci2g0725 | 954 | Gene3D | Transferase(Phosphotransferase) domain 1 | 732 | 952 | - | - | |
Prci2g0725 | 954 | Pfam | Leucine Rich Repeat | 502 | 522 | IPR001611 | GO:0005515 | |
Prci2g0725 | 954 | FunFam | receptor protein-tyrosine kinase CEPR1 | 629 | 731 | - | - | |
Prci2g0725 | 954 | Gene3D | Ribonuclease Inhibitor | 291 | 570 | IPR032675 | - | |
Prci2g0725 | 954 | PRINTS | Leucine-rich repeat signature | 499 | 512 | - | - | |
Prci2g0725 | 954 | PRINTS | Leucine-rich repeat signature | 334 | 347 | - | - | |
Prci2g0725 | 954 | Gene3D | Ribonuclease Inhibitor | 176 | 290 | IPR032675 | - | |
Prci2g0725 | 954 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 775 | 787 | IPR008271 | GO:0004672|GO:0006468 | |
Prci2g0725 | 954 | SUPERFAMILY | L domain-like | 283 | 541 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci2g0725 | Prci-Chr2 | 5476619 | 5480518 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci2g0725 | 24 | 941 | Receptor kinase-like Gene Family | AT5G49660 | 66.273 | 0.0 | 1231 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Prci2g0725 | Pkinase | 5.4e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci2g0725 | - | - | qsa:O6P43_015448 | 1433.31 |