Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0724 ATGTTACTTCCCTCCACCTTCCACCATCGTGTCTCTGCCCTTGTCTTTCTCCTCTGTTTCGTCGGAGTCAACTCTGATGAACCAGAACGTCAACTTCTACTACACCTTAAAGCAGCTCTTCAGGCGTCAAATCCCAGCGTGTTTGTCACGTGGAATGCTTCTAATTCAGTATGCAGCTTCAACGGAATCACGTGCAATCCAGGCGGTTCGGTGACCGGAATCGATCTCTCCGATAACATGCTTGCTGGTTTTCTTCCTTTCGACTCCATTTGCCAGCTCCAATCGCTCGAGAAGCTCTCGTTTGGGTTCAATTCATTGCATGGAAACATCTCTCAGGATTTGAGAAACTGCGTCAAATTGAAGTACTTGGACTTGGGCAATAATATTTTCTCTGGGCCATTCCCTGACATTTCTCCTCTCGCCCAGTTGCAGTATCTATATTTAAATCAAAGTGGCTTCTCTGGAACTTTCCCATGGAAGTCACTGCAAAATATGGCGAGTCTGGAGGTGTTAAGCGTCGGAGATAACCCCTTTCACCTCACTCCTTTTCCTTCTGAAGTTGTGAACCTCAAGAAATTGAAATGGCTATATCTGTCAAATTGCACTCTTGGTGGGAAAATACCAGCAGGGATCGGTAACCTCACAGAGCTCATGAACTTGGAATTTTCCGACAATTTTATATCTGGCGAGATTCCTTCAGAGATCGGCAAGCTTCGAAAACTATGGCAGCTTGAGATGTACAACAATTCGTTCACCGGGAAACTTCCATATGGGTTAAGAAACCTCACAAGGTTAGAGTACTTCGATGCGTCAATGAATAATCTGGGAGGCAATCTTTCTGAGTTGAGGTTCTTGACTAATCTGGTTTCTCTGCAATTATTTGAAAACGATTTTTCCGGGGAAATCCCTCCGGAGTTTGGTGAATTCAGAAAGCTCGTGAACATTTCGTTATACAGAAACAGACTGACTGGTTCTATTCCTCAAAAGATTGGATCTTGGGCTGAGTTCGATTACATCGACGTGTCCGAGAATTTCTTGACGGGTCCTATTCCTCCAGACATGTGCAATAAGGGGAAAATGCACGAGCTGCTCGTACTTCAGAACAAGCTCACCGGCGAAATCCCGGCCACTTATGCTAACTGTTTGTCTCTGCGTCGATTCAGAGTGAGCAATAATTCTCTCTCCGGCGTCGTACCTTCTGGAATTTGGGGGTTACCAAACGCTGAAATTATCGATATTGAATTGAATCGCTTGGGAGGTTCAGTTACTTCAAATATCGAGAATGCGAAGACGTTGGCTCAAATATTCGCTAGACAAAACCTCTTATCCGGTGAAATACCAGAAGAGATTTCAAAAGCTACCTCCTTGGTGACCGTTGACTTGGGCGAGAATCAAATTTCTGGGAAAATCCCAACGAGTATTGGTGAGCTTAAACAATTAAGCAGTCTAAATTTACAGAGTAACAAGTTATCTGGCCCAATCCCAGATTCTCTGGGTTTGTGCGTATCCCTCAGCGACATCAACCTATCTCAAAATTCACTCGGAAAAATGCCTTCTACTCTGGGATCTTTACCAGTCCTTAATTCTCTGAACCTGTCAACAAATGAACTTTCTGGCGAAATTCCGGCGAGTTTCTTGCGACTCCGATTGAGCCTTTTTGATTTATCAAACAACAAATTAGCCGGTTCAATCCCACAAGGTCTGTCTTTTCAAGCTTACAAAGGAAGTCTTGATGGAAACCCCGGTCTCTGCACCGTGGACGTCAATGTCACCTTCTTCAAGCCTTGCTCTGTACATTCCGACATTCCCAGACATATCCGCACATTCCTCGTTTGCTTCTCAATAGGCTTAATCATGCTTCTCCTCTGTCTGAGCCTTTACTGGCAACTAAAGAAGAAGGAGGAATATCGAGAACGCTCTCTAAAGGAAGAATCTTGGGATATAAAATCCTTCCACGTGCTAAGCTTCACAGAGGATGAGATTCTAGATTCCATCAAGCAAGAGAATCTCATAGGAAAAGGAGGCTCCGGGAACGTGTACAGAGTCGCGCTCTCCAACGGCAAAGACCTCGCCGTTAAGCATATATGGAAGACCGACAGCGGCGGTCGGAAAAGGAGCCGGAGCAGTGCTCCTATGATCGGGAAACGCGGGGAAAAATCAAAGGAATTTGATGCGGAAGTTCAGGCATTGAGCTCAATAAGGCACGTGAATGTGGTGAAGCTGTACTGCAGCATAACAAGCGAGGATTCGAATTTATTGGTGTACGAGTATATGCCCAATGGGAGCTTGTGGGATATGCTTCACACTAACGAGAAGATGCAGCTGGATTGGGAGACAAGGTACGAGATTGCCGTGGGAGCAGCGAAAGGGTTGGAATACCTCCATCATGGGTGCGAGAGGCCCGTGATTCATAGGGATGTGAAGTCCAGCAACATTTTGTTGGATGAGTTCTTGAAACCCAGGATTGCAGATTTCGGACTAGCTAAGATTGTCCAAGTCAACGCGGGCAAAGATTCTACTCATCTAGTTGCTGGAACTCATGGCTACATTGCCCCCGAATATGGGTACACGTACAAGGTGAACGAGAAGAGCGATGTATATAGCTTTGGAGTGGTGTTGATGGAGCTGGTGACGGGGAAGAGGCCGATAGAAGCTGAATTTGGGGAGAACGAGGACATAGTGAGCTGGGTGAGCAGCAAAGTGCAGCAACAAAACAGGGAGAAGATAATGGGAATAGTGGACTCAAGAATCCCACAAGTGTACAGAGAAGAGGCGATGAAGGTGTTGAGGATAGCTATTATGTGCACGGCCAGGCTGCCAGCATTGAGACCCACCATGAGAAGTGTGGTTCAGATGCTGGAGGATGCTGAGCCTTGTAAGTTAATTGTGGTCACCAAAGATGACTCTGCCAAGAAGCTGCAGATCCATGAGGCTGCAAAGCTTTCTTGA 2949 0.4598 MLLPSTFHHRVSALVFLLCFVGVNSDEPERQLLLHLKAALQASNPSVFVTWNASNSVCSFNGITCNPGGSVTGIDLSDNMLAGFLPFDSICQLQSLEKLSFGFNSLHGNISQDLRNCVKLKYLDLGNNIFSGPFPDISPLAQLQYLYLNQSGFSGTFPWKSLQNMASLEVLSVGDNPFHLTPFPSEVVNLKKLKWLYLSNCTLGGKIPAGIGNLTELMNLEFSDNFISGEIPSEIGKLRKLWQLEMYNNSFTGKLPYGLRNLTRLEYFDASMNNLGGNLSELRFLTNLVSLQLFENDFSGEIPPEFGEFRKLVNISLYRNRLTGSIPQKIGSWAEFDYIDVSENFLTGPIPPDMCNKGKMHELLVLQNKLTGEIPATYANCLSLRRFRVSNNSLSGVVPSGIWGLPNAEIIDIELNRLGGSVTSNIENAKTLAQIFARQNLLSGEIPEEISKATSLVTVDLGENQISGKIPTSIGELKQLSSLNLQSNKLSGPIPDSLGLCVSLSDINLSQNSLXGKMPSTLGSLPVLNSLNLSTNELSGEIPASFLRLRLSLFDLSNNKLAGSIPQGLSFQAYKGSLDGNPGLCTVDVNVTFFKPCSVHSDIPRHIRTFLVCFSIGLIMLLLCLSLYWQLKKKEEYRERSLKEESWDIKSFHVLSFTEDEILDSIKQENLIGKGGSGNVYRVALSNGKDLAVKHIWKTDSGGRKRSRSSAPMIGKRGEKSKEFDAEVQALSSIRHVNVVKLYCSITSEDSNLLVYEYMPNGSLWDMLHTNEKMQLDWETRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLAKIVQVNAGKDSTHLVAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELVTGKRPIEAEFGENEDIVSWVSSKVQQQNREKIMGIVDSRIPQVYREEAMKVLRIAIMCTARLPALRPTMRSVVQMLEDAEPCKLIVVTKDDSAKKLQIHEAAKLS 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0724 983 FunFam Probable inactive receptor kinase RLK902 26 184 - -
Prci2g0724 983 Gene3D Ribonuclease Inhibitor 356 470 IPR032675 -
Prci2g0724 983 Gene3D Transferase(Phosphotransferase) domain 1 759 975 - -
Prci2g0724 983 FunFam Leucine-rich repeat receptor-like protein kinase TDR 282 599 - -
Prci2g0724 983 SUPERFAMILY Protein kinase-like (PK-like) 656 955 IPR011009 -
Prci2g0724 983 Gene3D Ribonuclease Inhibitor 26 181 IPR032675 -
Prci2g0724 983 SUPERFAMILY RNI-like 338 589 - -
Prci2g0724 983 Gene3D Phosphorylase Kinase; domain 1 650 758 - -
Prci2g0724 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Prci2g0724 983 Gene3D Ribonuclease Inhibitor 283 355 IPR032675 -
Prci2g0724 983 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 19 954 - -
Prci2g0724 983 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 759 973 - -
Prci2g0724 983 FunFam Leucine-rich receptor-like protein kinase family protein 185 281 - -
Prci2g0724 983 FunFam Receptor-like protein kinase HAIKU2 649 758 - -
Prci2g0724 983 Pfam Leucine Rich Repeat 192 214 IPR001611 GO:0005515
Prci2g0724 983 Gene3D Ribonuclease Inhibitor 182 282 IPR032675 -
Prci2g0724 983 Gene3D Ribonuclease Inhibitor 471 593 IPR032675 -
Prci2g0724 983 SUPERFAMILY L domain-like 29 233 - -
Prci2g0724 983 SMART serkin_6 666 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0724 983 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Prci2g0724 983 SUPERFAMILY L domain-like 186 420 - -
Prci2g0724 983 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Prci2g0724 983 ProSiteProfiles Protein kinase domain profile. 666 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0724 983 Pfam Protein kinase domain 668 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0724 Prci-Chr2 5460907 5464252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0724 7 976 Receptor kinase-like Gene Family AT1G09970 63.153 0.0 1202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci2g0724 Pkinase 6.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0724 - - pcin:129294382 1422.14