Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0718 ATGGGTACTGGTTGGAGAAGAGCCTTTTGTACTCGCGACCCTGAATCTACCATATCCGATAAGCACCACAGAGGCACGAGTCCCAGCCCCAGCCCAAGAAGCTGTGTTCGATTGGGTTTCCTCTCTGGCGGCAGCAACCCTTCTACTCCACGCTTGCAGCAGCAATCTCAAGCTGTGTCTAGTCCCAGCCCGCGTTGCCGAACGGTTTCAGAAGCAGCAAACGTGAGTGATAGCCCCAGATTTCAAAGCAAAAATACTCCCAGGGCAACCAAGTCCCCCAAGACCACTTCAATCTCAAATCCAACGTCTCCGCGGTCTCCTTTGAAGTTATCTCTCTTCAAGAACAGCTTCAAATTCAGGAGTAGCTGTGGAATCTGTTTGAATAGCGTAAAAACAGGTCAGGGAACGGCCATTTACACTGCAGAATGTACTCATGCCTTCCATTTTCCCTGTATCGCCGATTATGTACGCAAGCATGGAAGCCTCGTCTGCCCCGTCTGCAGCGCTGCCTGGAAAGACGTGCCTCTACTAGCCGCACACAAGAACCTCGCCTCAGAATCCGCCGAAAAGAAAGATATCGTGGTTGAGATGAAGAGCGTCGAAAAACCAAATGCCGCCGATAAGAGAAAAGAAAACTCGTCCCCAGTTTTCAGAACCAAGCTCGTTGAACCGCCCCAACAATTTCCGCAGAAACAGCCTAAGCAATCTGATTCGTACAGGTCCTACGACGACGATGAGCCACTTCTATCTCCCACCTCCGGTGGTCGAATCATTCCCATTCCTGAAGCCGACGAAAACGCCGAAGAAGACGCTGAAGAGTTCCAGGGATTTTTCGCCAATGCAAAATCCTCATCCTCAATCAACTCTTACTCTGGTGACTTGCAAACAAGCGACAAAGATTCCAGGAACGTTCAGGTGAAGTTGATTCCCGAGTGTGCCGTAGTCTCAGTCTCTCGAACCCACGAGACTTACGCTTTGGTTCTTAAAGTGAAAGCCCCTACACCACCACTTCCAGCGCGTGGCTGCAATAACAGTACGACGCCTCGTCTTGGCCGGTCGCAGCGAGCTCCCATAGATCTCGTAACGGTTCTTGACCTAGGTGGTAGCATGACAGGCGCGAAGCTGCACATGCTAAAGCGCGCCATGCGTTTGGTTATCTCATCACTCAGTCCAGCCGACAGGCTATCCATAGTGGCTTTCTCGGCCACATGCAAGCGGCTCCTACCCTTGAGAAGAATGACGGCCCAAGGACAGCGCGTGGCTAGGCGCATCGTCGATCGGCTTGTCTCTGGCCACGGGACTTGCGTGGGTGATGCCCTGAGAAAAGCCACCAAAGTGCTTGAGGACCGGAGGGAGAGAAACCCGGTTGCCAGTGTGATGCTCTTATCGGACGGCCAGGATGAACGGGTCCAAAGCGGCAACATCAACACCCAACGAAAATCCTCGAGCCACGTGTCCTCAACCCGATTCGCCCATATCGAGATTCCGGTTCATGCGTTCGGCTTCGGTAAAAAGAGCGGCTTCAGCCACGAGCCGGCCGAGGATGCATTTGCTAAGTGCGTCGGTGGGTTATTGAGTGTGGTGGTACAGGACTTGAGAATTCAGCTTGGCTTCCAATCGGGCTGCTCGGCGGCTGAAATAAGCGGTATCTATTTATGCGGCGGACGAACCACAGCACTGAGCTCCGGCTGCGTACGGCTCGGTGATTTATACGCCGAAGAAGAGAGGGAGTTACTCGTGGAGCTGAGAGTCCCGACGTCGGCCGTGGGGACCCACCATGTGATGACTGTACGGTTCTTGTATAAGGACCCCGCTTCTCAAGAGATCGTATCCAGCAGGGAGCAGGCCCTACTACTTCCGCCACCTCAGGGAACCCGAAGCGAACGCTTGAGGAATTTCTTCATTACGACTCGAGCCATAGCCGAGTCCCGCAGGCTCGCTGACCACAACGACTTCACGAGGGCCCATCATTTACTGGCTTCGACTCGAGCCCTTTTGATGCAGGCCAAATCGAGCTCGGCTGAGGAGCACGTACGTGCGGTAGAAGCTGAGCTGGCAGAGCTTCATTGGCGCGCTCAGAACCCCACGGAGCAGCCGATGATGGTGCAGGACCGTCGGAGAGGGTACGAGAGGGAGACGACGAGCTTGGTGGATGAAAATGGCGAGCCGCTCACGCCGACGTCGGCTTGGAGAGCTGCTGAGAAGCTGGCCAAGGTAGCCATCATGAAGAAGTCATTGAACAGAGTCAGCGACTTGCACGGCTTCGAAAACGCTAGGTTTTAG 2283 0.5423 MGTGWRRAFCTRDPESTISDKHHRGTSPSPSPRSCVRLGFLSGGSNPSTPRLQQQSQAVSSPSPRCRTVSEAANVSDSPRFQSKNTPRATKSPKTTSISNPTSPRSPLKLSLFKNSFKFRSSCGICLNSVKTGQGTAIYTAECTHAFHFPCIADYVRKHGSLVCPVCSAAWKDVPLLAAHKNLASESAEKKDIVVEMKSVEKPNAADKRKENSSPVFRTKLVEPPQQFPQKQPKQSDSYRSYDDDEPLLSPTSGGRIIPIPEADENAEEDAEEFQGFFANAKSSSSINSYSGDLQTSDKDSRNVQVKLIPECAVVSVSRTHETYALVLKVKAPTPPLPARGCNNSTTPRLGRSQRAPIDLVTVLDLGGSMTGAKLHMLKRAMRLVISSLSPADRLSIVAFSATCKRLLPLRRMTAQGQRVARRIVDRLVSGHGTCVGDALRKATKVLEDRRERNPVASVMLLSDGQDERVQSGNINTQRKSSSHVSSTRFAHIEIPVHAFGFGKKSGFSHEPAEDAFAKCVGGLLSVVVQDLRIQLGFQSGCSAAEISGIYLCGGRTTALSSGCVRLGDLYAEEERELLVELRVPTSAVGTHHVMTVRFLYKDPASQEIVSSREQALLLPPPQGTRSERLRNFFITTRAIAESRRLADHNDFTRAHHLLASTRALLMQAKSSSAEEHVRAVEAELAELHWRAQNPTEQPMMVQDRRRGYERETTSLVDENGEPLTPTSAWRAAEKLAKVAIMKKSLNRVSDLHGFENARF 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0718 760 Pfam RING-like zinc finger 123 152 IPR001841 -
Prci2g0718 760 MobiDBLite consensus disorder prediction 202 216 - -
Prci2g0718 760 ProSiteProfiles Zinc finger RING-type profile. 123 168 IPR001841 -
Prci2g0718 760 FunFam Probable E3 ubiquitin-protein ligase EDA40 359 524 - -
Prci2g0718 760 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 122 755 - -
Prci2g0718 760 Pfam von Willebrand factor type A domain 360 466 IPR002035 -
Prci2g0718 760 CDD RING-H2_WAVH2 120 173 - -
Prci2g0718 760 Gene3D von Willebrand factor, type A domain 359 527 IPR036465 -
Prci2g0718 760 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 178 IPR013083 -
Prci2g0718 760 SMART ring_2 123 167 IPR001841 -
Prci2g0718 760 MobiDBLite consensus disorder prediction 202 259 - -
Prci2g0718 760 SUPERFAMILY RING/U-box 117 173 - -
Prci2g0718 760 SMART VWA_4 357 542 IPR002035 -
Prci2g0718 760 MobiDBLite consensus disorder prediction 1 107 - -
Prci2g0718 760 ProSiteProfiles VWFA domain profile. 359 503 IPR002035 -
Prci2g0718 760 MobiDBLite consensus disorder prediction 41 107 - -
Prci2g0718 760 SUPERFAMILY vWA-like 357 533 IPR036465 -
Prci2g0718 760 CDD vWA_C3HC4_type 358 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0718 Prci-Chr2 5391187 5394379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0718 123 173 C3H Transcription Factor Family AT1G74410 43.137 1.20e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0718 - - gmx:100782780 1044.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0718 2 5391187 5394379 Prci2g0718 2 5391187 5394379 ECH