Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0709 ATGGAGAATCATTCCCTCGCTTCCCACCCTGATTCCCGCCACTCCTCACCTTACTCTCAAGAAGTCGACAACGAGAATACATCGATGGACGATCCTTTTTTCACCACAACCACCAACAACAATCACAAAGTTAAATTCATGTGTAGCTACGGTGGAAATATCCAATTTAGGACCCACGATAATCAGCTTGCTTATGTCGGTGGTGATACCAAGATCATGGCCGTTGATCGCAACGCTAAGCTCTCGGCTATGACGGCGAAGCTCTCTTCTCTCTGCAATGCTGATGTTTTCATCAAGTACCAACTTCTTAGAGAAGATCTTGATGCTTTGATTTTGGTTACTAACGATGAGGATTTAGAGCACATGTTGATCGAATATGATCTCTCTCAACGTGAGTCGGTGAAGCCCGCTAGGTTGAGGCTGTTCCTTTTTCCACCAAAACCTTTGGCTCTGACAAGTTTTGAGTCAAACGATTTAAAATCAGAGCAGCAGCGGTTTATAGACGCACTCAATTTCGTGCACATTCCACATGTCAAGGGCACTTCAACTTCTGTGGCTGCATCGGCTGCGAATTTAGATTTTTTGTCTGGATTGGATTACAGATATTCAATTGTTCCAGCCACGAAATTACCTGATTTTGTTCCTCCTCCTGCGTCTGCCATTCCGCCTGCAGAGACAAATGGTTCTCCTATGGGAACGGATCGTGGATCAGAAGATCGAAACGTCGTTGGAGAACCGACGGAATCACCAGTTGAGATCCAGATACAGATCGAGGAGTCACAGAGATTGCATTGGGAAAAGAATGACCAAGTCCAACCAACAGGCGATGAAGACAATGGCACAGTTAATAAATCCATGGACTATAACTCTCAGAGAAATCTGAAGAAACTGAAAGCGCCGCCTGTTCATATTGTTCCAGCTCCGGTATCAATAGCGAGATCGGTGACAGTTTATTTGCCTGAAAGACTCATGACAAGTGCTGGTTATTCATTAGCAGCCCTTGTAACTGTTACTGATCAGCCGTTGTATCTCATTGCAACCCCAGTCATAATGTATCATGCGACCACTTTGCGAGCCGTGACTGGAACTTCTAGAATTGGGGCTAACAGTGTCGAAGCTAGTGGAATAGCACAGCCAAAGGTTGAGGTAGGAGAGCCTACCGGGTACCCACTGATGGTTTACAAAGATGCTGGAAGGCAGGTCTTCATTACGGCTCCAGCAGCTTGGGGTGGGGTAGTGCCTCCACATCTAGAGGTGGCTACCGGAAGTGATGGAACACAAGGTGGTGGTGGAACTGCTCTGAGTCAAGAAGGGAAGGTTTCCAAAGCAGATTTCACTGTTTGA 1344 0.4628 MENHSLASHPDSRHSSPYSQEVDNENTSMDDPFFTTTTNNNHKVKFMCSYGGNIQFRTHDNQLAYVGGDTKIMAVDRNAKLSAMTAKLSSLCNADVFIKYQLLREDLDALILVTNDEDLEHMLIEYDLSQRESVKPARLRLFLFPPKPLALTSFESNDLKSEQQRFIDALNFVHIPHVKGTSTSVAASAANLDFLSGLDYRYSIVPATKLPDFVPPPASAIPPAETNGSPMGTDRGSEDRNVVGEPTESPVEIQIQIEESQRLHWEKNDQVQPTGDEDNGTVNKSMDYNSQRNLKKLKAPPVHIVPAPVSIARSVTVYLPERLMTSAGYSLAALVTVTDQPLYLIATPVIMYHATTLRAVTGTSRIGANSVEASGIAQPKVEVGEPTGYPLMVYKDAGRQVFITAPAAWGGVVPPHLEVATGSDGTQGGGGTALSQEGKVSKADFTV 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0709 447 SUPERFAMILY CAD & PB1 domains 59 154 - -
Prci2g0709 447 Pfam PB1 domain 59 145 IPR000270 GO:0005515
Prci2g0709 447 Gene3D - 64 145 - -
Prci2g0709 447 MobiDBLite consensus disorder prediction 1 33 - -
Prci2g0709 447 MobiDBLite consensus disorder prediction 420 447 - -
Prci2g0709 447 MobiDBLite consensus disorder prediction 10 33 - -
Prci2g0709 447 MobiDBLite consensus disorder prediction 263 284 - -
Prci2g0709 447 SMART PB1_new 58 146 IPR000270 GO:0005515
Prci2g0709 447 MobiDBLite consensus disorder prediction 425 447 - -
Prci2g0709 447 CDD PB1_UP2 47 144 - -
Prci2g0709 447 MobiDBLite consensus disorder prediction 216 249 - -
Prci2g0709 447 PANTHER OS05G0427100 PROTEIN-RELATED 9 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0709 Prci-Chr2 5312242 5313681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0709 42 171 MAP Kinase Kinase Kinase AT5G57610 40.602 5.40e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0709 - - pcin:129294124 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0709 2 5312242 5313681 Prci2g0709 2 5312242 5313681 ECH