Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0708 ATGGTGGTGAGGAAAGTGGGAAAGTATGAGATTGGGAGGACGATTGGGGAGGGCACCTTTGCCAAAGTGAAGTTCGCTCAGAACACAGAGAGCGGGGAGAGCGTCGCCATGAAAGTGCTCGATCGCAGCACTATCATCGAGCACAAAATGGTGGACCAGATCAAGAGGGAGATTTCTATTATGAAGCTAGTTAGACATCCAAATGTCGTCCGTCTCCACGAGGTTCTAGCAAGCCGTACTAAGATTTATATCATCTTGGAGTTCATTACAGGTGGCGAATTATTTGATAAAATAGTACACCATGGGCGTATTAGTGAAGCTGAATCAAGAAGATACTTCCAACAGCTCGTTGATGGTGTAGACTTTTGCCACAGCATGGGAGTTTATCACAGAGATTTAAAGCCTGAAAATCTCTTGCTTGATTCACAAGGAAATATGAAGATTTCAGATTTTGGTTTGAGTGCATTACCAGAACAGGGGGTTAGTATCCTTCGGACGACCTGTGGGACACCAAATTATGTAGCTCCTGAGGTAAATGTACTGAGTCACAAGGGTTATGATGGTGCTATGGCAGATGTTTGGTCCTGTGGCGTTATCCTTTATGTTCTGTTGGCTGGATATCTTCCCTTTGATGAACTTGATCTTACCACGTTATACAGTAAGATTTTGGGCGTGGAATGGGAATTGCAGTTCTTACAAGTTCCTGCAGTATTCCTCTGTCTAATGTTTGCTTCTTTTAAACTATGCTTGGATCAAAAAGAATTTTGGATTATTCCTATGATGCTGTTGACTTTCCCTGACCCTTTCATGCAGATTGATAGAGCAGAGTTTTCATGCCCAGCGTGGTTTCCAATGGGAGCAAAATCTTTAATACATAGAATTCTGGACCCAAATCCTCAGACTCGCATAACTGTTGAACAGATAAGAAATGATGAGTGGTTTAAGAAGGGTTACGTTCCTGTGAGTCTACTGGAGTATGAAGATGTAAATTTGGACGATGTAAATGCAGCTTTTGACGATGCTGAGGATCAAACAGTCAATCAACAGAGTGAAAATGAAGACATGGGTCCTTTAATTCTTAATGCATTTGATTTGATAATTCTGTCTCAAGGATTAAACCTAGCATCACTCTTCGATCGTCGGCAGTAA 1149 0.4186 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTESGESVAMKVLDRSTIIEHKMVDQIKREISIMKLVRHPNVVRLHEVLASRTKIYIILEFITGGELFDKIVHHGRISEAESRRYFQQLVDGVDFCHSMGVYHRDLKPENLLLDSQGNMKISDFGLSALPEQGVSILRTTCGTPNYVAPEVNVLSHKGYDGAMADVWSCGVILYVLLAGYLPFDELDLTTLYSKILGVEWELQFLQVPAVFLCLMFASFKLCLDQKEFWIIPMMLLTFPDPFMQIDRAEFSCPAWFPMGAKSLIHRILDPNPQTRITVEQIRNDEWFKKGYVPVSLLEYEDVNLDDVNAAFDDAEDQTVNQQSENEDMGPLILNAFDLIILSQGLNLASLFDRRQ 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0708 382 ProSiteProfiles NAF domain profile. 355 379 IPR018451 GO:0007165
Prci2g0708 382 FunFam Non-specific serine/threonine protein kinase 2 237 - -
Prci2g0708 382 ProSiteProfiles Protein kinase domain profile. 9 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0708 382 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 379 - -
Prci2g0708 382 SUPERFAMILY Protein kinase-like (PK-like) 6 332 IPR011009 -
Prci2g0708 382 Pfam Protein kinase domain 9 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0708 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Prci2g0708 382 Gene3D Kinase associated domain 1, KA1 354 382 - -
Prci2g0708 382 Pfam NAF domain 357 380 IPR004041 GO:0007165
Prci2g0708 382 FunFam Non-specific serine/threonine protein kinase 1 88 - -
Prci2g0708 382 SMART serkin_6 9 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0708 382 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Prci2g0708 382 Gene3D Phosphorylase Kinase; domain 1 2 88 - -
Prci2g0708 382 Gene3D Transferase(Phosphotransferase) domain 1 89 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0708 Prci-Chr2 5304070 5309192 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0708 1 380 CBL-interacting serine-threonine protein kinases AT4G24400 70.789 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci2g0708 Pkinase 2.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0708 - - pcin:129303603 769.615