Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0707 ATGGGAGTTTATCACAGAGATTTAAAGCCTGAAAATCTCTTGCTTGATTCACAAGGAAATATGAAGATTTCAGATTTTGGTTTGAGTGCATTACCAGAACAGGGGGTTAGTATCCTTCGGACGACCTGTGGGACACCAAATTATGTAGCTCCTGAGGTAAATGTACTGAGTCACAAGGGTTATGATGGTGCTATGGCAGATGTTTGGTCCTGTGGCGTTATCCTTTATGTTCTGTTGGCTGGATATCTTCCCTTTGATGAACTTGATCTTACCACGTTATACAGTAAGATTTTGGGCGTGGAATGGGAATTGCAGTTCTTACAAGTTCCTGCAGTATTCCTCTGTCTAATGTTTGCTTCTTTTAAACTATGCTTGGATCAAAAAGAATTTTGGATTATTCCTATGATGCTGTTGACTTTCCCTGACCCTTTCATGCAGATTGATAGAGCAGAGTTTTCATGCCCAGCGTGGTTTCCAATGGGAGCAAAATCTTTAATACATAGAATTCTGGACCCAAATCCTCAGACTCGCATAACTGTTGAACAGATAAGAAATGATGAGTGGTTTAAGAAGGGTTACGTTCCTGTGAGTCTACTGGAGTATGAAGATGTAAATTTGGACGATGTAAATGCAGCTTTTGACGATGCTGAGGATCAAACAGTCAATCAACAGAGTGAAAATGAAGACATGGGTCCTTTAATTCTTAATGCATTTGATTTGATAATTCTGTCTCAAGGATTAAACCTAGCATCACTCTTCGATCGTCGGCAGGACTCTGTGAACTGCCAAACACGCTTTATCACTCGAAAGCCAGCAAAGGTGGTTTTATCAAGTATGGAAGTTGTGGCACAATCAATGGGATTTAAGACTCATATTCGCAATTACAAGATGAGAGTAGAGGGTATTTCAGCAGACAAGACTTCTTATTTTTCGGTGATACTGGAAATTTTTGAAGTTGCTCCCACATTTTTAATGGTGGACATTCAAAAAACAGCTGGAGATGTGGGTGAATACCTCAAGTTTTACAAGACTTTTTGTAGCAATCTTGAGGATATAATATGGAAACCGCCTCTTGAAGCAAGCAAATCAAAGATCTCCAAGACTAGAAGCAAAAAAAGGTAG 1122 0.3948 MGVYHRDLKPENLLLDSQGNMKISDFGLSALPEQGVSILRTTCGTPNYVAPEVNVLSHKGYDGAMADVWSCGVILYVLLAGYLPFDELDLTTLYSKILGVEWELQFLQVPAVFLCLMFASFKLCLDQKEFWIIPMMLLTFPDPFMQIDRAEFSCPAWFPMGAKSLIHRILDPNPQTRITVEQIRNDEWFKKGYVPVSLLEYEDVNLDDVNAAFDDAEDQTVNQQSENEDMGPLILNAFDLIILSQGLNLASLFDRRQDSVNCQTRFITRKPAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGISADKTSYFSVILEIFEVAPTFLMVDIQKTAGDVGEYLKFYKTFCSNLEDIIWKPPLEASKSKISKTRSKKR 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0707 373 SUPERFAMILY Protein kinase-like (PK-like) 1 221 IPR011009 -
Prci2g0707 373 Gene3D Kinase associated domain 1, KA1 229 355 - -
Prci2g0707 373 ProSiteProfiles Protein kinase domain profile. 1 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0707 373 CDD CIPK_C 236 351 - -
Prci2g0707 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 3 15 IPR008271 GO:0004672|GO:0006468
Prci2g0707 373 FunFam Non-specific serine/threonine protein kinase 230 354 - -
Prci2g0707 373 Gene3D Transferase(Phosphotransferase) domain 1 1 197 - -
Prci2g0707 373 ProSiteProfiles NAF domain profile. 230 254 IPR018451 GO:0007165
Prci2g0707 373 Pfam NAF domain 232 290 IPR004041 GO:0007165
Prci2g0707 373 SMART serkin_6 1 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0707 373 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 2 340 - -
Prci2g0707 373 Pfam Protein kinase domain 1 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0707 Prci-Chr2 5303175 5308965 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0707 2 315 CBL-interacting serine-threonine protein kinases AT4G24400 66.879 6.30e-147 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci2g0707 Pkinase 6.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0707 - - pcin:129303603 730.709