Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0705 ATGGTGGTGAGGAAAGTGGGAAAGTATGAGATTGGGAGGACGATTGGGGAGGGCACCTTTGCCAAAGTGAAGTTCGCTCAGAACACAGAGAGCGGGGAGAGCGTCGCCATGAAAGTGCTCGATCGCAGCACTATCATCGAGCACAAAATGGTGGACCAGATCAAGAGGGAGATTTCTATTATGAAGCTAGTTAGACATCCAAATGTCGTCCGTCTCCACGAGGTTCTAGCAAGCCGTACTAAGATTTATATCATCTTGGAGTTCATTACAGGTGGCGAATTATTTGATAAAATAGTACACCATGGGCGTATTAGTGAAGCTGAATCAAGAAGATACTTCCAACAGCTCGTTGATGGTGTAGACTTTTGCCACAGCATGGGAGTTTATCACAGAGATTTAAAGCCTGAAAATCTCTTGCTTGATTCACAAGGAAATATGAAGATTTCAGATTTTGGTTTGAGTGCATTACCAGAACAGGGGGTTAGTATCCTTCGGACGACCTGTGGGACACCAAATTATGTAGCTCCTGAGGTAAATGTACTGAGTCACAAGGGTTATGATGGTGCTATGGCAGATGTTTGGTCCTGTGGCGTTATCCTTTATGTTCTGTTGGCTGGATATCTTCCCTTTGATGAACTTGATCTTACCACGTTATACAGTAAGATTGATAGAGCAGAGTTTTCATGCCCAGCGTGGTTTCCAATGGGAGCAAAATCTTTAATACATAGAATTCTGGACCCAAATCCTCAGACTCGCATAACTGTTGAACAGATAAGAAATGATGAGTGGTTTAAGAAGGGTTACGTTCCTGTGAGTCTACTGGAGTATGAAGATGTAAATTTGGACGATGTAAATGCAGCTTTTGACGATGCTGAGGATCAAACAGTCAATCAACAGAGTGAAAATGAAGACATGGGTCCTTTAATTCTTAATGCATTTGATTTGATAATTCTGTCTCAAGGATTAAACCTAGCATCACTCTTCGATCGTCGGCAGGACTCTGTGAACTGCCAAACACGCTTTATCACTCGAAAGCCAGCAAAGGTGGTTTTATCAAGTATGGAAGTTGTGGCACAATCAATGGGATTTAAGACTCATATTCGCAATTACAAGATGAGAGTAGAGGGTATTTCAGCAGACAAGACTTCTTATTTTTCGGTGATACTGGAAATTTTTGAAGTTGCTCCCACATTTTTAATGGTGGACATTCAAAAAACAGCTGGAGATGTGGGTGAATACCTCAAGTTTTACAAGACTTTTTGTAGCAATCTTGAGGATATAATATGGAAACCGCCTCTTGAAGCAAGCAAATCAAAGATCTCCAAGACTAGAAGCAAAAAAAGGTAG 1347 0.4143 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTESGESVAMKVLDRSTIIEHKMVDQIKREISIMKLVRHPNVVRLHEVLASRTKIYIILEFITGGELFDKIVHHGRISEAESRRYFQQLVDGVDFCHSMGVYHRDLKPENLLLDSQGNMKISDFGLSALPEQGVSILRTTCGTPNYVAPEVNVLSHKGYDGAMADVWSCGVILYVLLAGYLPFDELDLTTLYSKIDRAEFSCPAWFPMGAKSLIHRILDPNPQTRITVEQIRNDEWFKKGYVPVSLLEYEDVNLDDVNAAFDDAEDQTVNQQSENEDMGPLILNAFDLIILSQGLNLASLFDRRQDSVNCQTRFITRKPAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGISADKTSYFSVILEIFEVAPTFLMVDIQKTAGDVGEYLKFYKTFCSNLEDIIWKPPLEASKSKISKTRSKKR 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0705 448 Pfam NAF domain 307 365 IPR004041 GO:0007165
Prci2g0705 448 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Prci2g0705 448 Gene3D Kinase associated domain 1, KA1 309 430 - -
Prci2g0705 448 Gene3D Transferase(Phosphotransferase) domain 1 3 308 - -
Prci2g0705 448 SUPERFAMILY Protein kinase-like (PK-like) 6 295 IPR011009 -
Prci2g0705 448 SMART serkin_6 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0705 448 CDD CIPK_C 311 426 - -
Prci2g0705 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Prci2g0705 448 FunFam Non-specific serine/threonine protein kinase 1 88 - -
Prci2g0705 448 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0705 448 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 415 - -
Prci2g0705 448 FunFam Non-specific serine/threonine protein kinase 305 429 - -
Prci2g0705 448 Pfam Protein kinase domain 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0705 448 FunFam Non-specific serine/threonine protein kinase 2 305 - -
Prci2g0705 448 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0705 Prci-Chr2 5303175 5309161 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0705 1 390 CBL-interacting serine-threonine protein kinases AT4G24400 81.282 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci2g0705 Pkinase 5.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0705 - - tcc:18591854 786.178