Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0702 ATGGTGGTGAGGAAAGTGGGAAAGTATGAGATTGGGAGGACGATTGGGGAGGGCACCTTTGCCAAAGTGAAGTTCGCTCAGAACACAGAGAGCGGGGAGAGCGTCGCCATGAAAGTGCTCGATCGCAGCACTATCATCGAGCACAAAATGGTGGACCAGATCAAGAGGGAGATTTCTATTATGAAGCTAGTTAGACATCCAAATGTCGTCCGTCTCCACGAGGTTCTAGCAAGCCGTACTAAGATTTATATCATCTTGGAGTTCATTACAGGTGGCGAATTATTTGATAAAATAGTACACCATGGGCGTATTAGTGAAGCTGAATCAAGAAGATACTTCCAACAGCTCGTTGATGGTGTAGACTTTTGCCACAGCATGGGAGTTTATCACAGAGATTTAAAGCCTGAAAATCTCTTGCTTGATTCACAAGGAAATATGAAGATTTCAGATTTTGGTTTGAGTGCATTACCAGAACAGGGGGTTAGTATCCTTCGGACGACCTGTGGGACACCAAATTATGTAGCTCCTGAGGTAAATGTACTGAGTCACAAGGGTTATGATGGTGCTATGGCAGATGTTTGGTCCTGTGGCGTTATCCTTTATGTTCTGTTGGCTGGATATCTTCCCTTTGATGAACTTGATCTTACCACGTTATACAATTTTGGGCGTGGAATGGGAATTGCAGTTCTTACAAGTTCCTGCAGTATTCCTCTGTCTAATATTGATAGAGCAGAGTTTTCATGCCCAGCGTGGTTTCCAATGGGAGCAAAATCTTTAATACATAGAATTCTGGACCCAAATCCTCAGACTCGCATAACTGTTGAACAGATAAGAAATGATGAGTGGTTTAAGAAGGGTTACGTTCCTGTGAGTCTACTGGAGTATGAAGATGTAAATTTGGACGATGTAAATGCAGCTTTTGACGATGCTGAGGATCAAACAGTCAATCAACAGAGTGAAAATGAAGACATGGGTCCTTTAATTCTTAATGCATTTGATTTGATAATTCTGTCTCAAGGATTAAACCTAGCATCACTCTTCGATCGTCGGCAGGACTCTGTGAACTGCCAAACACGCTTTATCACTCGAAAGCCAGCAAAGGTGGTTTTATCAAGTATGGAAGTTGTGGCACAATCAATGGGATTTAAGACTCATATTCGCAATTACAAGATGAGAGTAGAGGGTATTTCAGCAGACAAGACTTCTTATTTTTCGGTGATACTGGAAATTTTTGAAGTTGCTCCCACATTTTTAATGGTGGACATTCAAAAAACAGCTGGAGATGTGGGTGAATACCTCAAGTTTTACAAGACTTTTTGTAGCAATCTTGAGGATATAATATGGAAACCGCCTCTTGAAGCAAGCAAATCAAAGATCTCCAAGACTAGAAGCAAAAAAAGGTAG 1404 0.4145 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTESGESVAMKVLDRSTIIEHKMVDQIKREISIMKLVRHPNVVRLHEVLASRTKIYIILEFITGGELFDKIVHHGRISEAESRRYFQQLVDGVDFCHSMGVYHRDLKPENLLLDSQGNMKISDFGLSALPEQGVSILRTTCGTPNYVAPEVNVLSHKGYDGAMADVWSCGVILYVLLAGYLPFDELDLTTLYNFGRGMGIAVLTSSCSIPLSNIDRAEFSCPAWFPMGAKSLIHRILDPNPQTRITVEQIRNDEWFKKGYVPVSLLEYEDVNLDDVNAAFDDAEDQTVNQQSENEDMGPLILNAFDLIILSQGLNLASLFDRRQDSVNCQTRFITRKPAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGISADKTSYFSVILEIFEVAPTFLMVDIQKTAGDVGEYLKFYKTFCSNLEDIIWKPPLEASKSKISKTRSKKR 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0702 467 FunFam Non-specific serine/threonine protein kinase 324 448 - -
Prci2g0702 467 Gene3D Kinase associated domain 1, KA1 328 449 - -
Prci2g0702 467 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 434 - -
Prci2g0702 467 Pfam Protein kinase domain 9 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0702 467 CDD CIPK_C 330 445 - -
Prci2g0702 467 SUPERFAMILY Protein kinase-like (PK-like) 6 314 IPR011009 -
Prci2g0702 467 SMART serkin_6 9 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0702 467 Pfam NAF domain 326 384 IPR004041 GO:0007165
Prci2g0702 467 Gene3D Transferase(Phosphotransferase) domain 1 3 327 - -
Prci2g0702 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Prci2g0702 467 ProSiteProfiles Protein kinase domain profile. 9 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0702 467 ProSiteProfiles NAF domain profile. 324 348 IPR018451 GO:0007165
Prci2g0702 467 FunFam Non-specific serine/threonine protein kinase 2 226 - -
Prci2g0702 467 FunFam Non-specific serine/threonine protein kinase 1 88 - -
Prci2g0702 467 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0702 Prci-Chr2 5303175 5309171 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0702 1 409 CBL-interacting serine-threonine protein kinases AT4G24400 77.262 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci2g0702 Pkinase 5.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0702 - - tcc:18591854 772.696