Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0685 ATGCCTCACAGAGCGACTTACTTTTTCCCGAGGCAATTCCCGGAGCATGGGTTGGATGAATCTTCGAAACAGCTATTAGATCACGAGAAGCAGAGAATTGTCAACTCCATCAAATCAGAAACCTTTGACGTTGAAAGCGACCCTAAAAAGGCACTTACAACAACTACTGCCGCAACAACAAAGGACGATGTCGTTTTCCCGTCTGGGAAACACTCAGCTTTATCCGACCTTTTCACGGGCAATGACAAGTTCAGGGCCAAGCAGAAGCAAGTTGCTGCTTTCCGCAACTGGTTGATAGAGAAAAAAGGGGATAGATCGGGTCACGTGAAACCACACTCCTGCCGGTTATCCTGTGAGGAGGACCGCGAGCTTCTGCTTCCGTCGGAGTCCGTGCCGCCGCCTCCGCCACCGGAGACAGTGAAAGATGCAATCATCCGGAGTTTTGACCGCCAAGTCTCGTTGCCGAGGTTATCCAGCGGCAGTAGCTATGCTGGGAGCTTGTTCTCGGGGACAACGTTGGACGGCAATTTTTCAAGCGACATTAAGGAGGAAACTACGTCGTCTCGGGTCTCCACCACAACAAGAAGACTGGAGGAAGAGGAGGAAGAAAGTAAGGAGACGTTGGCGCAGAAGTGCAAGGAGAGATACTGCCTGCAGATCACGCTGGCTAAGAGACTCACCTGTCTAGCAAGTCTTACTGCTGATGAGCCTGTGCTTACTTTGGACGCTGGAATAGAGACGTGGGATGTGGAATCCGTTTCTTATCGTCTCTGGGTTAGTGGCTGCTTATCGTACTCTGACAAAATATCTGATGGTTTTTATAACATCTTGGGGATGAATCCATATCTATGGGTGATGTGCAATGAACTGGAGGAAAGTAGGCGGCTCCCACCTTTGATGGCGCTTAAAGCAGTGGAACCAAGCGACGCTTCTATGGAGGTGGTCCTTGTTGATAGACACGAGGACTCTAGGCTAAAGGAACTTCATGATAAAGCACAAGAGTTGTATTGTGATTCAGAGAACACCTTGGTATTGGTGGAAAAACTAGGAAAACTTGTTGCGATATATATGGGGGGTACTTTCCCGGTGGAGCAAGGAGCGCTCCACAAGCAATGGAAGTTGGTTAGTAGGAGATTGAAGAATTTTCAGAAGTGTGTTGTGCTTCCTATCGGCAACCTATCTGCAGGACTTTGCAGGCATCGGGCTATTCTCTTCAAGAGATTGGCAGATTACATTGGTTTGCCATGTCGTATTGCTCGAGGTTGCAAGTATTGTGCTGCAGATCATAGATCTTCTTGCCTTGTCAAGATTAAAGATGACAGACAACTCTCAAGCAGGGAATATGTAGTTGATCTAGTTGGGGAACCTGGAAATGTCCATGGGCCTGATTCCTCAATTAATGGAGCATATGTCTGTTCAACGCCTTCCCCATTTCAAATTTCTCATCTGCTGGAGTCCCACTCTCCTTATATTGATGATGCATCAAGTTCCATAGCCAGTTCTGTTGTTCCTGAAAGTCATTTATATTCTGGCTGTACAAAGAGAGATCAACTGGTCAAACGAACTGGTTTGCTTAAATGTTCTGTGAACTTGAATCAAACTCGTGCAGTTAATGTAGAGGAAAGTGAAGTTCTAGGTTCAAATTTGCCTTCCATTCAGGAGGTTGTTTCTGAAGATCTGCATCCAGCCACTGAGGCATTGTTGCATGAATACCCCATGCATGTCGAGGATTCAGTTGTCATAAAAGAAACTTCCAATAATGATGAGATCATTGTAACTGGAAGTCCAGTGGTAAAAGCCACTTCTAAGAAACCCATACTGGGCCCACCCTGCCAGTTAGAACTAGAGTCTGTAGATAGTGGACTTGAAAACCGTGACCATTTTTCTGCTGGAAACATTCCAAGATATTTGAATCTTGAACCATCACTCGCCATGGATTGGCTTGAAATATCATGGGATGAATTACGCATTAAAGAGCGTGTTGGTGCTGGGTCATTTGGGACAGTGCACCGTGCTGAATGGCATGGATCTGATGTTGCAGTTAAGGTTTTAACAATTCAGGATTTCGAGGATGATCAGTTGAGAGAGTTTCTCAGGGAGGTTGCAATAATGAAACGTGTCCGCCATCCAAATGTGGTGCTCTTCATGGGTGCAGTTACAAAACGGCCTAATCTGTCAATTGTAACGGAATATTTGCCAAGGGGTAGTTTATACCGCCTGATACATAGGCCAGCATCTGGGGAATTGTTGGATCAGAGGAGACGATTACGGATGGCTTTAGACGTGGCTAAAGGGATCAATTATCTACACTGTTTGAGCCCTCCAATCGTGCATTGGGATCTCAAATCCCCAAACTTGTTAGTTGATAAAAATTGGACTGTAAAGGTGTGTGATTTTGGATTGTCGAGATTCAAGGCAAACACTTTCATATCATCAAAATCTGTTGCTGGAACAGTTGAACTTTTACTTCGCAGTCCTTCAATAAGAGTGTAA 2493 0.4549 MPHRATYFFPRQFPEHGLDESSKQLLDHEKQRIVNSIKSETFDVESDPKKALTTTTAATTKDDVVFPSGKHSALSDLFTGNDKFRAKQKQVAAFRNWLIEKKGDRSGHVKPHSCRLSCEEDRELLLPSESVPPPPPPETVKDAIIRSFDRQVSLPRLSSGSSYAGSLFSGTTLDGNFSSDIKEETTSSRVSTTTRRLEEEEEESKETLAQKCKERYCLQITLAKRLTCLASLTADEPVLTLDAGIETWDVESVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNELEESRRLPPLMALKAVEPSDASMEVVLVDRHEDSRLKELHDKAQELYCDSENTLVLVEKLGKLVAIYMGGTFPVEQGALHKQWKLVSRRLKNFQKCVVLPIGNLSAGLCRHRAILFKRLADYIGLPCRIARGCKYCAADHRSSCLVKIKDDRQLSSREYVVDLVGEPGNVHGPDSSINGAYVCSTPSPFQISHLLESHSPYIDDASSSIASSVVPESHLYSGCTKRDQLVKRTGLLKCSVNLNQTRAVNVEESEVLGSNLPSIQEVVSEDLHPATEALLHEYPMHVEDSVVIKETSNNDEIIVTGSPVVKATSKKPILGPPCQLELESVDSGLENRDHFSAGNIPRYLNLEPSLAMDWLEISWDELRIKERVGAGSFGTVHRAEWHGSDVAVKVLTIQDFEDDQLREFLREVAIMKRVRHPNVVLFMGAVTKRPNLSIVTEYLPRGSLYRLIHRPASGELLDQRRRLRMALDVAKGINYLHCLSPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTVELLLRSPSIRV 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0685 830 ProSitePatterns Protein kinases ATP-binding region signature. 661 682 IPR017441 GO:0005524
Prci2g0685 830 ProSiteProfiles Protein kinase domain profile. 655 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0685 830 Coils Coil 190 214 - -
Prci2g0685 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 776 788 IPR008271 GO:0004672|GO:0006468
Prci2g0685 830 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 196 819 - -
Prci2g0685 830 SMART serkin_6 655 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0685 830 Pfam Protein tyrosine and serine/threonine kinase 655 806 IPR001245 GO:0004672|GO:0006468
Prci2g0685 830 CDD STKc_MAP3K-like 661 826 - -
Prci2g0685 830 Gene3D Transferase(Phosphotransferase) domain 1 734 827 - -
Prci2g0685 830 MobiDBLite consensus disorder prediction 179 205 - -
Prci2g0685 830 FunFam Serine/threonine-protein kinase isoform 1 645 733 - -
Prci2g0685 830 Gene3D Phosphorylase Kinase; domain 1 648 732 - -
Prci2g0685 830 SUPERFAMILY Protein kinase-like (PK-like) 633 819 IPR011009 -
Prci2g0685 830 Pfam Ethylene-responsive protein kinase Le-CTR1 250 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0685 Prci-Chr2 5053771 5059795 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0685 1 822 MAP Kinase Kinase Kinase AT4G24480 55.326 0.0 886
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Prci2g0685 EDR1 5.6e-77 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0685 - - gmx:100808435 1096.65