Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0684 ATGCCTCACAGAGCGACTTACTTTTTCCCGAGGCAATTCCCGGAGCATGGGTTGGATGAATCTTCGAAACAGCTATTAGATCACGAGAAGCAGAGAATTGTCAACTCCATCAAATCAGAAACCTTTGACGTTGAAAGCGACCCTAAAAAGGCACTTACAACAACTACTGCCGCAACAACAAAGGACGATGTCGTTTTCCCGTCTGGGAAACACTCAGCTTTATCCGACCTTTTCACGGGCAATGACAAGTTCAGGGCCAAGCAGAAGCAAGTTGCTGCTTTCCGCAACTGGTTGATAGAGAAAAAAGGGGATAGATCGGGTCACGTGAAACCACACTCCTGCCGGTTATCCTGTGAGGAGGACCGCGAGCTTCTGCTTCCGTCGGAGTCCGTGCCGCCGCCTCCGCCACCGGAGACAGTGAAAGATGCAATCATCCGGAGTTTTGACCGCCAAGTCTCGTTGCCGAGGTTATCCAGCGGCAGTAGCTATGCTGGGAGCTTGTTCTCGGGGACAACGTTGGACGGCAATTTTTCAAGCGACATTAAGGAGGAAACTACGTCGTCTCGGGTCTCCACCACAACAAGAAGACTGGAGGAAGAGGAGGAAGAAAGTAAGGAGACGTTGGCGCAGAAGTGCAAGGAGAGATACTGCCTGCAGATCACGCTGGCTAAGAGACTCACCTGTCTAGCAAGTCTTACTGCTGATGAGCCTGTGCTTACTTTGGACGCTGGAATAGAGACGTGGGATGTGGAATCCGTTTCTTATCGTCTCTGGGTTAGTGGCTGCTTATCGTACTCTGACAAAATATCTGATGGTTTTTATAACATCTTGGGGATGAATCCATATCTATGGGTGATGTGCAATGAACTGGAGGAAAGTAGGCGGCTCCCACCTTTGATGGCGCTTAAAGCAGTGGAACCAAGCGACGCTTCTATGGAGGTGGTCCTTGTTGATAGACACGAGGACTCTAGGCTAAAGGAACTTCATGATAAAGCACAAGAGTTGTATTGTGATTCAGAGAACACCTTGGTATTGGTGGAAAAACTAGGAAAACTTGTTGCGATATATATGGGGGGTACTTTCCCGGTGGAGCAAGGAGCGCTCCACAAGCAATGGAAGTTGGTTAGTAGGAGATTGAAGAATTTTCAGAAGTGTGTTGTGCTTCCTATCGGCAACCTATCTGCAGGACTTTGCAGGCATCGGGCTATTCTCTTCAAGAGATTGGCAGATTACATTGGTTTGCCATGTCGTATTGCTCGAGGTTGCAAGTATTGTGCTGCAGATCATAGATCTTCTTGCCTTGTCAAGATTAAAGATGACAGACAACTCTCAAGGGAATATGTAGTTGATCTAGTTGGGGAACCTGGAAATGTCCATGGGCCTGATTCCTCAATTAATGGAGCATATGTCTGTTCAACGCCTTCCCCATTTCAAATTTCTCATCTGCTGGAGTCCCACTCTCCTTATATTGATGATGCATCAAGTTCCATAGCCAGTTCTGTTGTTCCTGAAAGTCATTTATATTCTGGCTGTACAAAGAGAGATCAACTGGTCAAACGAACTGGTTTGCTTAAATGTTCTGTGAACTTGAATCAAACTCGTGCAGTTAATGTAGAGGAAAGTGAAGTTCTAGGTTCAAATTTGCCTTCCATTCAGGAGGTTGTTTCTGAAGATCTGCATCCAGCCACTGAGGCATTGTTGCATGAATACCCCATGCATGTCGAGGATTCAGTTGTCATAAAAGAAACTTCCAATAATGATGAGATCATTGTAACTGGAAGTCCAGTGGTAAAAGCCACTTCTAAGAAACCCATACTGGGCCCACCCTGCCAGTTAGAACTAGAGTCTGTAGATAGTGGACTTGAAAACCGTGACCATTTTTCTGCTGGAAACATTCCAAGATATTTGAATCTTGAACCATCACTCGCCATGGATTGGCTTGAAATATCATGGGATGAATTACGCATTAAAGAGCGTGTTGGTGCTGGGTCATTTGGGACAGTGCACCGTGCTGAATGGCATGGATCTGATGTTGCAGTTAAGGTTTTAACAATTCAGGATTTCGAGGATGATCAGTTGAGAGAGTTTCTCAGGGAGGTTGCAATAATGAAACGTGTCCGCCATCCAAATGTGGTGCTCTTCATGGGTGCAGTTACAAAACGGCCTAATCTGTCAATTGTAACGGAATATTTGCCAAGGGGTAGTTTATACCGCCTGATACATAGGCCAGCATCTGGGGAATTGTTGGATCAGAGGAGACGATTACGGATGGCTTTAGACGTGGCTAAAGGGATCAATTATCTACACTGTTTGAGCCCTCCAATCGTGCATTGGGATCTCAAATCCCCAAACTTGTTAGTTGATAAAAATTGGACTGTAAAGGTGTGTGATTTTGGATTGTCGAGATTCAAGGCAAACACTTTCATATCATCAAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCAGAATTTCTTCGTGGAGAACCTTCAAATGAGAAGTCTGATGTTTACAGCTTTGGAGTCATCCTGTGGGAACTTGTGACCATGCAGCAACCATGGAATGGACTCAGTCCTGCTCAGGTGGTTGGAGCTGTTGCTTTTCAGAATCGGAAGCTTGCTATTCCTCCAAACATCTCCCCAGTATTGGCCTCTCTCATGGAATCTTGTTGGGATGATGATCCCAAGAATCGGCCTTCTTTCTCTAGTATAGTAGAATCGCTAAAGAAGCTGCTAAGATCTCCGGCGGAGATGATAAAAATGGGTGGGACATGA 2775 0.4577 MPHRATYFFPRQFPEHGLDESSKQLLDHEKQRIVNSIKSETFDVESDPKKALTTTTAATTKDDVVFPSGKHSALSDLFTGNDKFRAKQKQVAAFRNWLIEKKGDRSGHVKPHSCRLSCEEDRELLLPSESVPPPPPPETVKDAIIRSFDRQVSLPRLSSGSSYAGSLFSGTTLDGNFSSDIKEETTSSRVSTTTRRLEEEEEESKETLAQKCKERYCLQITLAKRLTCLASLTADEPVLTLDAGIETWDVESVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNELEESRRLPPLMALKAVEPSDASMEVVLVDRHEDSRLKELHDKAQELYCDSENTLVLVEKLGKLVAIYMGGTFPVEQGALHKQWKLVSRRLKNFQKCVVLPIGNLSAGLCRHRAILFKRLADYIGLPCRIARGCKYCAADHRSSCLVKIKDDRQLSREYVVDLVGEPGNVHGPDSSINGAYVCSTPSPFQISHLLESHSPYIDDASSSIASSVVPESHLYSGCTKRDQLVKRTGLLKCSVNLNQTRAVNVEESEVLGSNLPSIQEVVSEDLHPATEALLHEYPMHVEDSVVIKETSNNDEIIVTGSPVVKATSKKPILGPPCQLELESVDSGLENRDHFSAGNIPRYLNLEPSLAMDWLEISWDELRIKERVGAGSFGTVHRAEWHGSDVAVKVLTIQDFEDDQLREFLREVAIMKRVRHPNVVLFMGAVTKRPNLSIVTEYLPRGSLYRLIHRPASGELLDQRRRLRMALDVAKGINYLHCLSPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWNGLSPAQVVGAVAFQNRKLAIPPNISPVLASLMESCWDDDPKNRPSFSSIVESLKKLLRSPAEMIKMGGT 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0684 924 SUPERFAMILY Protein kinase-like (PK-like) 633 907 IPR011009 -
Prci2g0684 924 SMART serkin_6 654 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0684 924 Coils Coil 190 214 - -
Prci2g0684 924 FunFam Serine/threonine-protein kinase isoform 1 644 732 - -
Prci2g0684 924 CDD STKc_MAP3K-like 660 908 - -
Prci2g0684 924 Pfam Protein tyrosine and serine/threonine kinase 654 908 IPR001245 GO:0004672|GO:0006468
Prci2g0684 924 Gene3D Phosphorylase Kinase; domain 1 647 731 - -
Prci2g0684 924 FunFam Serine/threonine-protein kinase CTR1 733 918 - -
Prci2g0684 924 ProSiteProfiles Protein kinase domain profile. 654 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0684 924 MobiDBLite consensus disorder prediction 179 205 - -
Prci2g0684 924 Gene3D Transferase(Phosphotransferase) domain 1 733 920 - -
Prci2g0684 924 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 196 913 - -
Prci2g0684 924 PRINTS Tyrosine kinase catalytic domain signature 769 787 IPR001245 GO:0004672|GO:0006468
Prci2g0684 924 PRINTS Tyrosine kinase catalytic domain signature 728 741 IPR001245 GO:0004672|GO:0006468
Prci2g0684 924 PRINTS Tyrosine kinase catalytic domain signature 835 857 IPR001245 GO:0004672|GO:0006468
Prci2g0684 924 PRINTS Tyrosine kinase catalytic domain signature 879 901 IPR001245 GO:0004672|GO:0006468
Prci2g0684 924 Pfam Ethylene-responsive protein kinase Le-CTR1 250 458 - -
Prci2g0684 924 ProSitePatterns Protein kinases ATP-binding region signature. 660 681 IPR017441 GO:0005524
Prci2g0684 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 775 787 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0684 Prci-Chr2 5051344 5059769 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0684 1 923 MAP Kinase Kinase Kinase AT4G24480 58.111 0.0 1079
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Prci2g0684 PK_Tyr_Ser-Thr 8.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0684 - - gmx:100808435 1292.72