Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0683 ATGCCTCACAGAGCGACTTACTTTTTCCCGAGGCAATTCCCGGAGCATGGGTTGGATGAATCTTCGAAACAGCTATTAGATCACGAGAAGCAGAGAATTGTCAACTCCATCAAATCAGAAACCTTTGACGTTGAAAGCGACCCTAAAAAGGCACTTACAACAACTACTGCCGCAACAACAAAGGACGATGTCGTTTTCCCGTCTGGGAAACACTCAGCTTTATCCGACCTTTTCACGGGCAATGACAAGTTCAGGGCCAAGCAGAAGCAAGTTGCTGCTTTCCGCAACTGGTTGATAGAGAAAAAAGGGGATAGATCGGGTCACGTGAAACCACACTCCTGCCGGTTATCCTGTGAGGAGGACCGCGAGCTTCTGCTTCCGTCGGAGTCCGTGCCGCCGCCTCCGCCACCGGAGACAGTGAAAGATGCAATCATCCGGAGTTTTGACCGCCAAGTCTCGTTGCCGAGGTTATCCAGCGGCAGTAGCTATGCTGGGAGCTTGTTCTCGGGGACAACGTTGGACGGCAATTTTTCAAGCGACATTAAGGAGGAAACTACGTCGTCTCGGGTCTCCACCACAACAAGAAGACTGGAGGAAGAGGAGGAAGAAAGTAAGGAGACGTTGGCGCAGAAGTGCAAGGAGAGATACTGCCTGCAGATCACGCTGGCTAAGAGACTCACCTGTCTAGCAAGTCTTACTGCTGATGAGCCTGTGCTTACTTTGGACGCTGGAATAGAGACGTGGGATGTGGAATCCGTTTCTTATCGTCTCTGGGTTAGTGGCTGCTTATCGTACTCTGACAAAATATCTGATGGTTTTTATAACATCTTGGGGATGAATCCATATCTATGGGTGATGTGCAATGAACTGGAGGAAAGTAGGCGGCTCCCACCTTTGATGGCGCTTAAAGCAGTGGAACCAAGCGACGCTTCTATGGAGGTGGTCCTTGTTGATAGACACGAGGACTCTAGGCTAAAGGAACTTCATGATAAAGCACAAGAGTTGTATTGTGATTCAGAGAACACCTTGGTATTGGTGGAAAAACTAGGAAAACTTGTTGCGATATATATGGGGGGTACTTTCCCGGTGGAGCAAGGAGCGCTCCACAAGCAATGGAAGTTGGTTAGTAGGAGATTGAAGAATTTTCAGAAGTGTGTTGTGCTTCCTATCGGCAACCTATCTGCAGGACTTTGCAGGCATCGGGCTATTCTCTTCAAGAGATTGGCAGATTACATTGGTTTGCCATGTCGTATTGCTCGAGGTTGCAAGTATTGTGCTGCAGATCATAGATCTTCTTGCCTTGTCAAGATTAAAGATGACAGACAACTCTCAAGCAGGGAATATGTAGTTGATCTAGTTGGGGAACCTGGAAATGTCCATGGGCCTGATTCCTCAATTAATGGAGCATATGTCTGTTCAACGCCTTCCCCATTTCAAATTTCTCATCTGCTGGAGTCCCACTCTCCTTATATTGATGATGCATCAAGTTCCATAGCCAGTTCTGTTGTTCCTGAAAGTCATTTATATTCTGGCTGTACAAAGAGAGATCAACTGGTCAAACGAACTGGTTTGCTTAAATGTTCTGTGAACTTGAATCAAACTCGTGCAGTTAATGTAGAGGAAAGTGAAGTTCTAGGTTCAAATTTGCCTTCCATTCAGGAGGTTGTTTCTGAAGATCTGCATCCAGCCACTGAGGCATTGTTGCATGAATACCCCATGCATGTCGAGGATTCAGTTGTCATAAAAGAAACTTCCAATAATGATGAGATCATTGTAACTGGAAGTCCAGTGGTAAAAGCCACTTCTAAGAAACCCATACTGGGCCCACCCTGCCAGTTAGAACTAGAGTCTGTAGATAGTGGACTTGAAAACCGTGACCATTTTTCTGCTGGAAACATTCCAAGATATTTGAATCTTGAACCATCACTCGCCATGGATTGGCTTGAAATATCATGGGATGAATTACGCATTAAAGAGCGTGTTGGTGCTGGGTCATTTGGGACAGTGCACCGTGCTGAATGGCATGGATCTGATGTTGCAGTTAAGGTTTTAACAATTCAGGATTTCGAGGATGATCAGTTGAGAGAGTTTCTCAGGGAGGTTGCAATAATGAAACGTGTCCGCCATCCAAATGTGGTGCTCTTCATGGGTGCAGTTACAAAACGGCCTAATCTGTCAATTGTAACGGAATATTTGCCAAGGGGTAGTTTATACCGCCTGATACATAGGCCAGCATCTGGGGAATTGTTGGATCAGAGGAGACGATTACGGATGGCTTTAGACGTGGCTAAAGGGATCAATTATCTACACTGTTTGAGCCCTCCAATCGTGCATTGGGATCTCAAATCCCCAAACTTGTTAGTTGATAAAAATTGGACTGTAAAGGTGTGTGATTTTGGATTGTCGAGATTCAAGGCAAACACTTTCATATCATCAAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCAGAATTTCTTCGTGGAGAACCTTCAAATGAGAAGTCTGATGTTTACAGCTTTGGAGTCATCCTGTGGGAACTTGTGACCATGCAGCAACCATGGAATGGACTCAGTCCTGCTCAGGTGGTTGGAGCTGTTGCTTTTCAGAATCGGAAGCTTGCTATTCCTCCAAACATCTCCCCAGTATTGGCCTCTCTCATGGAATCTTGTTGGGATGATGATCCCAAGAATCGGCCTTCTTTCTCTAGTATAGTAGAATCGCTAAAGAAGCTGCTAAGATCTCCGGCGGAGATGATAAAAATGGGTGGGACATGA 2778 0.4579 MPHRATYFFPRQFPEHGLDESSKQLLDHEKQRIVNSIKSETFDVESDPKKALTTTTAATTKDDVVFPSGKHSALSDLFTGNDKFRAKQKQVAAFRNWLIEKKGDRSGHVKPHSCRLSCEEDRELLLPSESVPPPPPPETVKDAIIRSFDRQVSLPRLSSGSSYAGSLFSGTTLDGNFSSDIKEETTSSRVSTTTRRLEEEEEESKETLAQKCKERYCLQITLAKRLTCLASLTADEPVLTLDAGIETWDVESVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNELEESRRLPPLMALKAVEPSDASMEVVLVDRHEDSRLKELHDKAQELYCDSENTLVLVEKLGKLVAIYMGGTFPVEQGALHKQWKLVSRRLKNFQKCVVLPIGNLSAGLCRHRAILFKRLADYIGLPCRIARGCKYCAADHRSSCLVKIKDDRQLSSREYVVDLVGEPGNVHGPDSSINGAYVCSTPSPFQISHLLESHSPYIDDASSSIASSVVPESHLYSGCTKRDQLVKRTGLLKCSVNLNQTRAVNVEESEVLGSNLPSIQEVVSEDLHPATEALLHEYPMHVEDSVVIKETSNNDEIIVTGSPVVKATSKKPILGPPCQLELESVDSGLENRDHFSAGNIPRYLNLEPSLAMDWLEISWDELRIKERVGAGSFGTVHRAEWHGSDVAVKVLTIQDFEDDQLREFLREVAIMKRVRHPNVVLFMGAVTKRPNLSIVTEYLPRGSLYRLIHRPASGELLDQRRRLRMALDVAKGINYLHCLSPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWNGLSPAQVVGAVAFQNRKLAIPPNISPVLASLMESCWDDDPKNRPSFSSIVESLKKLLRSPAEMIKMGGT 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0683 925 ProSitePatterns Protein kinases ATP-binding region signature. 661 682 IPR017441 GO:0005524
Prci2g0683 925 Pfam Ethylene-responsive protein kinase Le-CTR1 250 459 - -
Prci2g0683 925 Coils Coil 190 214 - -
Prci2g0683 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 776 788 IPR008271 GO:0004672|GO:0006468
Prci2g0683 925 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 196 914 - -
Prci2g0683 925 CDD STKc_MAP3K-like 661 909 - -
Prci2g0683 925 MobiDBLite consensus disorder prediction 179 205 - -
Prci2g0683 925 FunFam Serine/threonine-protein kinase isoform 1 645 733 - -
Prci2g0683 925 PRINTS Tyrosine kinase catalytic domain signature 836 858 IPR001245 GO:0004672|GO:0006468
Prci2g0683 925 PRINTS Tyrosine kinase catalytic domain signature 880 902 IPR001245 GO:0004672|GO:0006468
Prci2g0683 925 PRINTS Tyrosine kinase catalytic domain signature 729 742 IPR001245 GO:0004672|GO:0006468
Prci2g0683 925 PRINTS Tyrosine kinase catalytic domain signature 770 788 IPR001245 GO:0004672|GO:0006468
Prci2g0683 925 Gene3D Phosphorylase Kinase; domain 1 648 732 - -
Prci2g0683 925 FunFam Serine/threonine-protein kinase CTR1 734 919 - -
Prci2g0683 925 Pfam Protein tyrosine and serine/threonine kinase 655 909 IPR001245 GO:0004672|GO:0006468
Prci2g0683 925 Gene3D Transferase(Phosphotransferase) domain 1 734 921 - -
Prci2g0683 925 SUPERFAMILY Protein kinase-like (PK-like) 634 908 IPR011009 -
Prci2g0683 925 ProSiteProfiles Protein kinase domain profile. 655 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0683 925 SMART serkin_6 655 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0683 Prci-Chr2 5051344 5059775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0683 1 924 MAP Kinase Kinase Kinase AT4G24480 58.051 0.0 1074
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Prci2g0683 PK_Tyr_Ser-Thr 8.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0683 - - gmx:100808435 1288.09