Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0675 ATGCTCTACTCCTTTACTCGCAAGGAGCTTCTAGAAATAATTTGTGCTGAGCTTGGCAAAGAGAGGAAGTACACTGGATATACCAAGACTCAAATGATAGAGTATCTTCTTAAGTTAATTTCTAAGAAATCCACTCTGCACATAGTCCAAAATAACAGTCACATTGGTTCTAAAAGGAAAAGTGGACCTCCCTCTCGAGATTTACATTATGTTCCTCTGGTGAATAATAAAGAGGAAAATGTAAAATCCTTACTGTGCCCGAATGTTGCATGCAGAGCTACTTTGTGTCCAGAAGATGCTTTTTGTAAGAGATGTTCTTGCTGTATTTGTCATTCTTATGATGATAACAAGGATCCTAGTTTATGGTTGACCTGTGGATCTGATCTTCTTGATGAGAAGGATTCATGTGGACTGTCGTGTCATTTACAATGTGCTTTGAATTATAAGAAGTCTGGCATTTTGAAAGACAGATTTAGTACAACGTTTGATGGAAGTTTTTCTTGTGTTTCTTGTGGAAAAATTAATGGATTAATGAGGACATGGAGGAAGCAATTATTGGTTGCAAAAGAAGCCAGAAGAGTTGATATACTGTGTTCACGGATATATTTGGCTCACAGAATTCTGTTAGGAACTGAGGTATACAAGGAAGTACATAAAATTGTCGAAGCTGCTCTCAAATTGCTTAACAATGAAGTGGGGCCTCAGGATCAGGAATGCTTAAGGATGACACGGGGCATTGTGAACAGGCTTTCATGTGGTGCTGAGGTTCAGAAGTTGTGCTCTTATGCAGTTGAGCTTTTTGATTCAATGTTTCCTAACCTTTATCCTTACTCAGTGGAAAAGAAAGATGCACCAACATGCACTATACGTTTTGAAGAGTGCCTCCCCACCTCTGTTGTCATTGTGCTAGAGTATGAAGATCATCTTTTAAAAGACTTTTTGGGCTGCAGGCTTTGGCATAGAACATCAGCACTGGGCTACTCTGAACAACCCACCTTCATTGTATTAAGGCCGGAAAAAAAGTTTAAGCTGGAAAACCTCTATCCTTCAACCGAGTATTTTTGCAAGGCTTCGCTGTTTAGCAGCACGGGCATTCTGGGCACTGCAGAATCTAGATGGGTAACCCCTTGTAATCCCAGTGTATCTCCTTCAAAAGTTAATAGAACTGGCAGTGACAGGGATCATATTAGACATTCGCCTGATGGGTCCTCTGTTACCACCTTGGACACGCATGCGCAGGAAAAATACGGGATAGCTGTTGAAAATCATCATCGCATGGAATCTGCCAACTCTGACATCAACTCATTCTCTAGGGACCATCCCGCAAAACTTTTCTTCTCTGATAACTTCAGGGGTAGGTTTGAAGGGTTCCTCTCAAAGCCTCCATCAATTGAATCTATTCCATCTAAAACTTTTGCTGCGGTTTCACCTCCCACACCTTCGAAATTGGACGAAATGAGGCAAATTACTGATTTGGGTGATAGAAAGCGCTTGGAGGAAAATGACTATGAGTACTCTGTCAGGGTAGTCAAATGGTTAGAGCATGAAGGTCACATCGACCAAAACTTCAGAGTAAAATTTCTGACTTGGTTCAGCCTTAAAGCTAATCCACAAGAGAGAAGGGTGGTTAGCGCTTTTGTGGATGCATTGGTTGATGACCCACCAAGCTTAGTTGATCAACTTATACACACCTTCATGGACGAAATATGTTGCGAGCAAAAACCTTAG 1728 0.4109 MLYSFTRKELLEIICAELGKERKYTGYTKTQMIEYLLKLISKKSTLHIVQNNSHIGSKRKSGPPSRDLHYVPLVNNKEENVKSLLCPNVACRATLCPEDAFCKRCSCCICHSYDDNKDPSLWLTCGSDLLDEKDSCGLSCHLQCALNYKKSGILKDRFSTTFDGSFSCVSCGKINGLMRTWRKQLLVAKEARRVDILCSRIYLAHRILLGTEVYKEVHKIVEAALKLLNNEVGPQDQECLRMTRGIVNRLSCGAEVQKLCSYAVELFDSMFPNLYPYSVEKKDAPTCTIRFEECLPTSVVIVLEYEDHLLKDFLGCRLWHRTSALGYSEQPTFIVLRPEKKFKLENLYPSTEYFCKASLFSSTGILGTAESRWVTPCNPSVSPSKVNRTGSDRDHIRHSPDGSSVTTLDTHAQEKYGIAVENHHRMESANSDINSFSRDHPAKLFFSDNFRGRFEGFLSKPPSIESIPSKTFAAVSPPTPSKLDEMRQITDLGDRKRLEENDYEYSVRVVKWLEHEGHIDQNFRVKFLTWFSLKANPQERRVVSAFVDALVDDPPSLVDQLIHTFMDEICCEQKP 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0675 575 CDD PHD_VIN3_plant 106 171 - -
Prci2g0675 575 MobiDBLite consensus disorder prediction 382 407 - -
Prci2g0675 575 PANTHER VIN3-LIKE PROTEIN 2-RELATED 1 414 IPR044514 GO:0010048|GO:0040029
Prci2g0675 575 Pfam PHD - plant homeodomain finger protein 86 205 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0675 Prci-Chr2 4992169 4997581 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0675 1 569 PHD Gene Family AT5G57380 34.050 1.31e-96 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0675 - - gmx:100785502 772.696